G33076 (LOC108442415,LOC108257608,LOC106560557,LOC107726497,LOC107696164)


Basic Information

Item Value
gene id G33076
gene name LOC108442415,LOC108257608,LOC106560557,LOC107726497,LOC107696164
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73882893 ~ 73884914 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44407
ACCAGTTGGGAATTTGTGATTAAAGTATGAAGAAACTGTAAAATGTTAGtatattaatcattatttaataaacagtatacacactacacattcTGCTAGGTCTTTTCAGGcagaaatcatttttaaatgttcacagCTGATTCAGTTAATTTTCGCCATCACCAGTTTATGCAATAATAAcgaattaaaatgtgttttgaaagATAGATTTTAAGGACAAGCATTCAACAATTTCCTTTTAGCCTGCCCGACATTAAACTCATATATGGTCTTGAAAAAGTGTCTTTTTCCATCCCAGGGACGTTACGTTCTATGTTAGTTCTGGTTACTGTGTTTTTGCACAGTTGCAGAGTTCAACATCAGTTCAACCAAACACAAAGCTAGATTCTATGTGAGTCTGCCATATCTTAAAGAAGGAAGCGGCTCATCAATTTAAGTTTGACATATCAAATTATGGGTAAATAATGAGACACAATCTTGAACAACTCCGCTATGTCTGGATTTTATGTAATGCATGAACTTTTCAACCCAGATAGGGTCATGCAAAATACAAGTGTAGAGATAGCACGGCTCCTTAGCAAGTGCAATCTTGCTTCTGAAACCTCTGTGAAAGGAAAAAGTCAGTTATCACATGCTTCCTTCAACCATATTTTCACCACAAATGTGTGAAATGGCATTTGCAGGACTGTAGCTGTTCTATTAGTCAGATGCCATAAGTAAAAGAGACCAGACATGTCGAATTAATAGTAATGAAACTAGAAATGAGTAATAGAAAGTGTTTCTTTTTACAGTCAGACctacattttactttatttttaagtcaaaTGGTTTGTGGAAGATTCACTTGGGCTCATTTGGATCCTTGTCTGTGCATTATGTTTTTATgccatgatttttctttatccatggaaacctaaaataaaatgcCTTTAATAGACTTCTCTGACTCTTCATATAACCTTTTACATTCCATGCAAACCAACAGATTTATAAACATCACATGATTCAATATCATGAACACACAAATAGATCACATGGCACTAGATATGAAGATATCACTGAAGTATTTATAATGTTTGCTCTCTGATACATCATACAAATTTTCTAAGGTATTTCAAAAAGTTTAGAATTTTCTACTGAAGGTCTCTAGTTGGTCTTTCAGGTGACTGTTGACATGTTTAATGAATAcatgttatttatttagctctaaaaaaataataaaaaCATGAACCTGAAGTAGACCTACAGAgaaaacagtgttaatttaacaccaatgatgttgatttaacactggcaaatttaCTGTCTAGTGAAAAAGAAGAATTACCATGTATCTTACAGTGGTAACACAGTGCACACAGGCTACAAAGACTGCTCCCTAGATCAGCATTGGTTGTGCTGCTTTTCTTAGAAGCCTGTTGACCTGAGATATAGTAAAACTTCCGAGCATCTTCTTCCTTCCATTGCTCTCCAGTCTCCTTCACTCCACATCCGCTTCTTCATCGCCTGTTTTGAGCTCTTTCTCAGGGAGCAGTCCGTAGTCATTGAGGAAGGCCTCCACATCGGTGGCAAAGAACTCCTCGTTGAAGTGCTGTGTGACAGCTAGGAAGTTCCCCAGCATCTCTCCGGCTTTGTACACCAGCACAGCCGGTAGCACGTCATCAGAGAACTGTTCCCCTGCGCCTGTGACGGCTGAATTGATGCGGCAAAACTTGACGGTTGGGTATTCGGCAGCCAGGCAGTCCAGGCAGCTGTTGAGCGCGTCACAGCCCTTGACACTCTCCTTGTAGATGTGCACCACCACGATGGTGAGTCTATGCTCCTTCTCTATCACTTCAAGAAAGGCCTCACCATTCTCCAGGTCATACACTCCCTCAAACTTGGGCCCAAAGCTCAGGCGTTCATGCATTTCCTGCATGCACTGCTTGCGGTATTTGCGCAGGCACTGCTCGTCATCCTCCTTGAGCAGTTCATACTCCTGGACACTCATCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC104962440

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44407 True 1992 lncRNA 0.41 2 73882893 73884914

Neighbor

gene id symbol gene type direction distance location
LOC103034242 pla2g4a,LOC108442417,LOC108257972,LOC106560559 coding downstream 69752 73784007 ~ 73813141 (-)
ppil6 ppil6 coding downstream 127377 73749986 ~ 73755516 (-)
enah enah coding downstream 134983 73647169 ~ 73747910 (-)
LOC103032852 lbr coding downstream 243469 73630251 ~ 73639424 (-)
LOC103031805 LOC103031805,LOC105892805 coding downstream 273685 73604327 ~ 73609208 (-)
LOC103035214 NA coding upstream 46483 73931397 ~ 73939674 (-)
c3h1orf112 cunh1orf112 coding upstream 70897 73955811 ~ 73970935 (-)
LOC103037051 si:dkey-51e6.1,LOC103037051,LOC108442414,LOC107555634,LOC107726439,LOC107696171,LOC105907105,LOC108257519 coding upstream 92277 73977191 ~ 73979734 (-)
LOC103031184 LOC108443214 coding upstream 140691 74025605 ~ 74043117 (-)
LOC103038456 LOC103038456,LOC108443222,LOC107393220,LOC107098566,LOC106916811,LOC103142585 coding upstream 163025 74047939 ~ 74086439 (-)
G32937 NA non-coding downstream 346789 73533661 ~ 73536104 (-)
LOC111191385 NA non-coding downstream 554739 73326367 ~ 73328154 (-)
G32900 NA non-coding downstream 557526 73319644 ~ 73325367 (-)
G32891 NA non-coding downstream 619340 73262330 ~ 73263553 (-)
G32879 NA non-coding downstream 664742 73217900 ~ 73218151 (-)
G33091 NA non-coding upstream 65998 73950912 ~ 73953542 (-)
G33099 NA non-coding upstream 106828 73991742 ~ 73992572 (-)
LOC111191425 NA other downstream 14355 73796463 ~ 73868538 (-)
ak9 ak9 other downstream 104027 73756908 ~ 73778866 (-)
G32946 NA other downstream 330010 73552415 ~ 73552883 (-)
G32914 NA other downstream 494281 73387862 ~ 73388612 (-)
LOC103029909 LOC108412949 other downstream 849107 72921906 ~ 73033786 (-)

Expression


Co-expression Network