LOC103023922


Basic Information

Item Value
gene id LOC103023922
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 45433919 ~ 45441256 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229703.3
AAcactgtgttttaactaaatgtgagcagtgtctgtgtgtgttatgcTTCAGGCAGCTAAACGCTGTTTAGTGCCGTGTTTTCCTGGGGGATGAGTCCTGTGGGCTGCCGGGATTTTGGTCTCCAACATGGCTGTTTGGTAGCTGGGTGCGATTTCTACAGGAAATACTTTCTGCTGGGCTGTGGATTTGTGCAGGGCTGCCATTCTACCGAGCTTACGTTTCACAAAGGGAATAACGATGAGTGATCCAGTGGTTCAGCTGGTATCCAGCTGTTATCAGGAAAATTTGCTTGAGGCAATGTGGAACCTAAGGGCCAATGGTGATCTGTGTGATATCACAGTGCAGGTTGATTTCCAAGGTCAGCTGGAAGAATTTGAGGCCCACCAGATAATACTTGCCGCATCCAGTGGCTATTTCAAGACCTGCATCTTGGCGAATGAACAAGTgaataaaatattcttaaatgATTTTGCACCCAAAGCCTTTGCCAAATTTCTAGAATACGCATATTCGGGGAAAATGGAAGTGGAAAAGAGCTACCTTAGCCACATATTGCTGATGGCGAAGCAGCTGGACTGCCAAAACTTAGTGGAGGCTTGTGATTCAATGCTTCTGAATTATATTttggaaaacacacagaaagggaaagaaaaagcaaaaagaggGAGGCCAGAAAAGCAAACAACTGAATCATTAGGTATGAGAAAAAAGATGAAAGTCATCCACACTAAAGAGGCGGAAAATGAAAGGGCACAGGGTAGGAGGAGTAGCAGCAGGTTAGCAGGCAGCAAAGTCTTTGTCAGTATCGACAAAAAAAAGACTGGCCGCAGGTCACAAGCCCAGTCTGAGGCATTGGACATCACAGAAAGTCCCAATGAATCAGAGACAAGAACAACACAAGAAGAGCCATTAAACATTTGTGAGTCCAAAGAAGCTAGTGATAAGGTTTTTCCTGAGAATGAGGCCCTTATGGACAGTGGGTCTGAGGCTGGTAGTTTCAACATTGATTTAGCAGATGAAGAATTTCATGACCCTGAGTTCCTGCCAGCTGAAGCCAAAGAAGAAACAGATGAGGCTGAAAAGGAACAAAAGTCGGGTAGTTCCAAATATGACTGTCAAAAGTGCTGTCGTTCATTTCGCTATGAGAAGAGCTACCTGAAGCATGTCAAAGTTAGTCATGGCATTGAGACTGACACTACCTACCGCTGTGATATCTGCCAGCAGACTTTTGCCAACCGCTGCAACCTTAAAATCCATAAACGGCATGTGCACAATGACGACAGGCTCTTTCCATGTGACGTCTGTAAGAAGGCCTTTAAACGCAAGAAGGATGTGACGAGACACAGGCGGCAGGTCCATGAGGGTGGAACTGAGCGCTACTACTGTACAATTTGTGGTAAATCATTAAGCTCCAGAACAGCCCTCACTCTGCATGAGAGAACACACACCGGTGACAAGCCCTACAGCTGCAACGAGTGTGAAGCCAGGTTCTCCCAAAGCTCTGCACTAAGAACACATCAGAGGAtccacaccggtgagaagcctTTTGCTTGTGATATGTGTGATGCCAAGTTCACCCAGAACCACATGTTGGCCTACCATAAGAGATGCCACACAGGAGAAAAGCCCTTCATGTGTGAAaactgtgggaaaagttttgCATCTAAAGAATACCTGAAACACCATGCCAGAATCCACTCTGGCTTCAAGCCTTACAAGTGTGACAACTGTGGAAGAGCATTTGCTCAACGAAACTCCCTTCATCAGCATATGAAAATACATACAGgTGAAAGGCCTTACCATTGTAAGGAGTGTGACAAGCAGTTCACCCAGCTGAACGCTCTTCAGAGACACCAAAGAATACACACAGGAGAAAAGCCATACATGTGCAGCGTGTGTGGCCGGACCTTTACAGACAAGTCTACTGTCCGCAGGCATGCCATGACTCACGACAAGGACACTCCTTGGAAGAATTATCTGGTTGTGCTGGAGGGTAATGTAGAAGATCGCATCAAGACACAAAAAGGTTCCTCTGACAAGAACAAGGCAGAAGAAATTAATGAAGAAGAACACAATCAAGAGGAGAAACAGAGTGAAGATCAGACCCAGGAGATAGTGACAGTGTCTGAAGAGCCAGTGACCATCTCTGGGGACTGGGCTGGCCCAGGCACCATTGCGCTGGTCAGCCATGGAGCACTGGGAAGCCTCGCAGTGATCCAAACTGAGGTGCCTGCTGGTACACAGCTGCAGCCCATTGTCGCCGCTGATGGAGCCAGTGTAATTTCTCTGGATAGTTCTACTGTTGGAATTCCTGTTACCGTTCCTTTTTCCATTCCCATCTCTGTTGCACATTCCATCTCCGAGTCAACAGCACTTACTGTCGCAGTCCCCCAGTCTGACCAAGCCACGGTTTCAGAGGCTGTGTTGGTGTCaggagacacagacacagaagcCCTTCTGGTACCAACTGAAGTCAGTTTGCCTACTGAATGCACAAAGCCACAGTCAGTGGTGGAGGAAGCTAAACAGGGACAAAACTTAGACACCCAAGAGGAAATGTCTGATAATGTGCAGCCTACAGCAAAAGCAGAAGCCATAGAGGCCTCTACAGAAGATTAAATTTAAACCTACATCATTGGCTTTTTCCCTACACTGTGTAATACAATCATATCATTGCTTTTCTAAGAAAATATATTACGTACAAACCTCATCTGAAATAGTAATTTTAGactatttctatttctgttaTTCGTTTTTCACAGTGTAGAAGGTAGATGTTGTACTGAAATGATGTAGAtggaatgtaaatgtaatacatGTAGAAATATAGATCATTGAGTTCATAGGAAAGTAACAGTATTTTTACTATCAttcctctctgctgtaaagagtgtgtgtataatatgtgtgCGTGTATACACTCATTTAatactttattaggaacactatACTAATACTGAAAGGGGCCTCTAAAAACAGCCCTAAATTAATTGTAGCATTTATTCcacaattttgttttatattttccaaAGAGATTCTAGTGCTTGTTCATAATCACATTTCAATCCTGCATCCAGGTTTTTCGTGACCTCTAAATCATTTATTCTATCATGTcccaaatgtgttttattgaattCAGAGCTGTTACTGGGACAATTATTAAACAGTTGTCTTGTTTGTAATTTTTCTAgcagaaatatgtttttaagaAGTAAAATGTGGTCAGAAAGGAATGTGCATGGTCAGCAACACTACTGTAGCAATTTAAGTGTCTTAATTGATATTAAGAAGCCCAAAGTGGGCAGTTTACACCATTAGACCACCTCCAATATCATGGGACCTTTTTTGTGGAATTccttcttttaaaaatgttatgtacTCTCAGAGCTGAAAGCTTCTGGATGCAGAAAAAAGCCATTCTCATTTGCAAATTAAAAGCTTTGCCTTTAAGTGACACTAAAacacattagaaacgaacataCAAAATGAAACTGGCATGGGGAAACAGACATTCTCCCATTCAAGTTGTATTTAGTACTGACAGTGAACATAAAAAACATGGCCTATGCAATGTTTTTTGTTCATACACTGTAGTACATGAGGTCCCTGGACTGTTAAGACAAGACAGTTTGGATCCATGTTTTCATGCTGTTGTGTTCATCAATAGAAAATGAGTTTCATCAGAAAAGgctgttttttcattttattgtataGTATTGGTAAGTGTGCATAAACTGCTGCCttagctttctgttcttgttcTATTATAGTCCATGAGGCATAAGTATTGACTCATTATGCATGCTTTTCTGCTCACCACAGTTGTACAAAGTGGTCGTCAAAGTTTCATTACTACACCATTATGATTAAACCCTGTTGTGCTTAAA
>XM_015605208.2
GTGAAcactgtgttttaactaaatgtgagcagtgtctgtgtgtgttatgcTTCAGGCAGCTAAACGCTGTTTAGTGCCGTGTTTTCCTGGGGGATGAGTCCTGTGGGCTGCCGGGATTTTGGTCTCCAACATGGCTGTTTGGTAGCTGGGTGCGATTTCTACAGGAAATACTTTCTGCTGGGCTGTGGATTTGTGCAGGGCTGCCATTCTACCGAGCTTACGACTGCAAAAGAAGACACGCAACAGTTTCACAAAGGGAATAACGATGAGTGATCCAGTGGTTCAGCTGGTATCCAGCTGTTATCAGGAAAATTTGCTTGAGGCAATGTGGAACCTAAGGGCCAATGGTGATCTGTGTGATATCACAGTGCAGGTTGATTTCCAAGGTCAGCTGGAAGAATTTGAGGCCCACCAGATAATACTTGCCGCATCCAGTGGCTATTTCAAGACCTGCATCTTGGCGAATGAACAAGTgaataaaatattcttaaatgATTTTGCACCCAAAGCCTTTGCCAAATTTCTAGAATACGCATATTCGGGGAAAATGGAAGTGGAAAAGAGCTACCTTAGCCACATATTGCTGATGGCGAAGCAGCTGGACTGCCAAAACTTAGTGGAGGCTTGTGATTCAATGCTTCTGAATTATATTttggaaaacacacagaaagggaaagaaaaagcaaaaagaggGAGGCCAGAAAAGCAAACAACTGAATCATTAGGTATGAGAAAAAAGATGAAAGTCATCCACACTAAAGAGGCGGAAAATGAAAGGGCACAGGGTAGGAGGAGTAGCAGCAGGTTAGCAGGCAGCAAAGTCTTTGTCAGTATCGACAAAAAAAAGACTGGCCGCAGGTCACAAGCCCAGTCTGAGGCATTGGACATCACAGAAAGTCCCAATGAATCAGAGACAAGAACAACACAAGAAGAGCCATTAAACATTTGTGAGTCCAAAGAAGCTAGTGATAAGGTTTTTCCTGAGAATGAGGCCCTTATGGACAGTGGGTCTGAGGCTGGTAGTTTCAACATTGATTTAGCAGATGAAGAATTTCATGACCCTGAGTTCCTGCCAGCTGAAGCCAAAGAAGAAACAGATGAGGCTGAAAAGGAACAAAAGTCGGGTAGTTCCAAATATGACTGTCAAAAGTGCTGTCGTTCATTTCGCTATGAGAAGAGCTACCTGAAGCATGTCAAAGTTAGTCATGGCATTGAGACTGACACTACCTACCGCTGTGATATCTGCCAGCAGACTTTTGCCAACCGCTGCAACCTTAAAATCCATAAACGGCATGTGCACAATGACGACAGGCTCTTTCCATGTGACGTCTGTAAGAAGGCCTTTAAACGCAAGAAGGATGTGACGAGACACAGGCGGCAGGTCCATGAGGGTGGAACTGAGCGCTACTACTGTACAATTTGTGGTAAATCATTAAGCTCCAGAACAGCCCTCACTCTGCATGAGAGAACACACACCGGTGACAAGCCCTACAGCTGCAACGAGTGTGAAGCCAGGTTCTCCCAAAGCTCTGCACTAAGAACACATCAGAGGAtccacaccggtgagaagcctTTTGCTTGTGATATGTGTGATGCCAAGTTCACCCAGAACCACATGTTGGCCTACCATAAGAGATGCCACACAGGAGAAAAGCCCTTCATGTGTGAAaactgtgggaaaagttttgCATCTAAAGAATACCTGAAACACCATGCCAGAATCCACTCTGGCTTCAAGCCTTACAAGTGTGACAACTGTGGAAGAGCATTTGCTCAACGAAACTCCCTTCATCAGCATATGAAAATACATACAGgTGAAAGGCCTTACCATTGTAAGGAGTGTGACAAGCAGTTCACCCAGCTGAACGCTCTTCAGAGACACCAAAGAATACACACAGGAGAAAAGCCATACATGTGCAGCGTGTGTGGCCGGACCTTTACAGACAAGTCTACTGTCCGCAGGCATGCCATGACTCACGACAAGGACACTCCTTGGAAGAATTATCTGGTTGTGCTGGAGGGTAATGTAGAAGATCGCATCAAGACACAAAAAGGTTCCTCTGACAAGAACAAGGCAGAAGAAATTAATGAAGAAGAACACAATCAAGAGGAGAAACAGAGTGAAGATCAGACCCAGGAGATAGTGACAGTGTCTGAAGAGCCAGTGACCATCTCTGGGGACTGGGCTGGCCCAGGCACCATTGCGCTGGTCAGCCATGGAGCACTGGGAAGCCTCGCAGTGATCCAAACTGAGGTGCCTGCTGGTACACAGCTGCAGCCCATTGTCGCCGCTGATGGAGCCAGTGTAATTTCTCTGGATAGTTCTACTGTTGGAATTCCTGTTACCGTTCCTTTTTCCATTCCCATCTCTGTTGCACATTCCATCTCCGAGTCAACAGCACTTACTGTCGCAGTCCCCCAGTCTGACCAAGCCACGGTTTCAGAGGCTGTGTTGGTGTCaggagacacagacacagaagcCCTTCTGGTACCAACTGAAGTCAGTTTGCCTACTGAATGCACAAAGCCACAGTCAGTGGTGGAGGAAGCTAAACAGGGACAAAACTTAGACACCCAAGAGGAAATGTCTGATAATGTGCAGCCTACAGCAAAAGCAGAAGCCATAGAGGCCTCTACAGAAGATTAAATTTAAACCTACATCATTGGCTTTTTCCCTACACTGTGTAATACAATCATATCATTGCTTTTCTAAGAAAATATATTACGTACAAACCTCATCTGAAATAGTAATTTTAGactatttctatttctgttaTTCGTTTTTCACAGTGTAGAAGGTAGATGTTGTACTGAAATGATGTAGAtggaatgtaaatgtaatacatGTAGAAATATAGATCATTGAGTTCATAGGAAAGTAACAGTATTTTTACTATCAttcctctctgctgtaaagagtgtgtgtataatatgtgtgCGTGTATACACTCATTTAatactttattaggaacactatACTAATACTGAAAGGGGCCTCTAAAAACAGCCCTAAATTAATTGTAGCATTTATTCcacaattttgttttatattttccaaAGAGATTCTAGTGCTTGTTCATAATCACATTTCAATCCTGCATCCAGGTTTTTCGTGACCTCTAAATCATTTATTCTATCATGTcccaaatgtgttttattgaattCAGAGCTGTTACTGGGACAATTATTAAACAGTTGTCTTGTTTGTAATTTTTCTAgcagaaatatgtttttaagaAGTAAAATGTGGTCAGAAAGGAATGTGCATGGTCAGCAACACTACTGTAGCAATTTAAGTGTCTTAATTGATATTAAGAAGCCCAAAGTGGGCAGTTTACACCATTAGACCACCTCCAATATCATGGGACCTTTTTTGTGGAATTccttcttttaaaaatgttatgtacTCTCAGAGCTGAAAGCTTCTGGATGCAGAAAAAAGCCATTCTCATTTGCAAATTAAAAGCTTTGCCTTTAAGTGACACTAAAacacattagaaacgaacataCAAAATGAAACTGGCATGGGGAAACAGACATTCTCCCATTCAAGTTGTATTTAGTACTGACAGTGAACATAAAAAACATGGCCTATGCAATGTTTTTTGTTCATACACTGTAGTACATGAGGTCCCTGGACTGTTAAGACAAGACAGTTTGGATCCATGTTTTCATGCTGTTGTGTTCATCAATAGAAAATGAGTTTCATCAGAAAAGgctgttttttcattttattgtataGTATTGGTAAGTGTGCATAAACTGCTGCCttagctttctgttcttgttcTATTATAGTCCATGAGGCATAAGTATTGACTCATTATGCATGCTTTTCTGCTCACCACAGTTGTACAAAGTGGTCGTCAAAGTTTCATTACTACACCATTATGATTAAACCCTGTTGTGCTTAAA

Function

GO: NA

KEGG:

id description
K22402 GZF1; GDNF-inducible zinc finger protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229703.3 False 3888 mRNA 0.42 6 45433922 45441256
XM_015605208.2 True 3915 mRNA 0.42 7 45433919 45441256

Neighbor

gene id symbol gene type direction distance location
atad2b atad2b,LOC107697175,LOC107667607 coding upstream 473683 44872464 ~ 44960236 (+)
wdcp wdcp,LOC107600078 coding upstream 625070 44803559 ~ 44808849 (+)
LOC111197225 LOC108410507 coding upstream 706714 44710373 ~ 44727205 (+)
LOC111191907 opn8a,LOC108410511,LOC107678826,LOC107726748,LOC107549662,LOC107743142 coding upstream 740747 44673130 ~ 44693172 (+)
LOC103046392 LOC103046392,LOC108414880 coding upstream 954015 44474148 ~ 44479904 (+)
LOC103022161 NA coding downstream 54425 45495681 ~ 45501646 (+)
LOC103028976 LOC103028976,LOC108410497,LOC107575557 coding downstream 119290 45560546 ~ 45570484 (+)
LOC103021983 plcb1,LOC108258091 coding downstream 174306 45615562 ~ 45785454 (+)
plcb4 plcb4,LOC108258041 coding downstream 361498 45802754 ~ 45926101 (+)
lamp5 lamp5,zgc:165600 coding downstream 493218 45934474 ~ 45945832 (+)
G26322 NA non-coding upstream 320951 45111185 ~ 45112968 (+)
G26286 NA non-coding upstream 568235 44865143 ~ 44865684 (+)
G26280 NA non-coding upstream 579409 44853881 ~ 44854510 (+)
G26235 NA non-coding upstream 633273 44799984 ~ 44800646 (+)
G26226 NA non-coding upstream 663917 44769262 ~ 44770002 (+)
G26390 NA non-coding downstream 8753 45450009 ~ 45538939 (+)
G26402 fermt1 non-coding downstream 83232 45524488 ~ 45528585 (+)
G26476 NA non-coding downstream 625632 46066888 ~ 46067187 (+)
G26477 NA non-coding downstream 639049 46080305 ~ 46083403 (+)
G26522 LOC103043020,LOC108411620,LOC108258012 non-coding downstream 914629 46355885 ~ 46357866 (+)
LOC103033920 LOC108416105 other upstream 1939603 43490323 ~ 43494316 (+)
G25880 NA other upstream 2009013 43424392 ~ 43424906 (+)
G25879 NA other upstream 2011873 43421771 ~ 43422046 (+)
rps29 NA other upstream 2070475 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 2171820 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 1087112 46528368 ~ 46549553 (+)
G26915 NA other downstream 2837011 48278267 ~ 48315894 (+)
G26995 NA other downstream 3114541 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 3137547 48578803 ~ 48618075 (+)
G27075 NA other downstream 3299958 48741214 ~ 48742439 (+)

Expression


Co-expression Network