klhl29 (klhl29,LOC107667613,LOC107742703,LOC107697176)


Basic Information

Item Value
gene id klhl29
gene name klhl29,LOC107667613,LOC107742703,LOC107697176
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44983244 ~ 45315255 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229706.2
ataaataaataagcagcgCGTACGATCAGCACAAAGCCCAGCGAGGAAGGGGCGGAGCGCAGCCGGAGTAAAGTAGCAGCGCGGCTCGGGTCGGGCTGAGGCTGAAGCTGCACGGCTCGCATCAGTGCTGGATACGCAGGAGAGGAGCTGCAGCTCCGGGGAGAGACTGACAACTCCAGCAGCGAGACgcggagagagacagagagggggcCGGCAGCGCGCGGGGACAGAGCGCGAGGGTCGGGAGAGGGTCGCTCTCAGACAGCCGCGCGCGCAGTGAGAGAAGTGCACGTGAGGAGAGAGGAGCACCTCCACATCCAGCACACACAGCTGAAGAGAGGGGAGCGAGGACAGACAGGCGCGCGGAGGCTGCGGCTGCAGTATGCTGAGGAGCACCTGACTATACTCAAAAGATCTCATTAGACTGTGATGAACAACATCATCTTCCACAGACCCAAGgcagTGCTACATTGCCTCTGAAAGGAAGTCATGTCACGTCACCACCACCGGTTTGAGCGGGACTACCGAGGGCCCTGGGAGCGCCGGGACCGCACTGCTGGCATCCACAATGGGGTGGCCAACAGTGCCTGCTCCCCCGCCGGCCCACCCCTGGCCAACGGCAACAACCGCCCCGGCCTCCTCCCTCTGCCAGTCATCCCCTCACTCCTGCCCAGCCCCGTCACCATCACTGTAACCACAAGCAGCACCGAGCTGGGCGTGAAGCGAGCTTCTTCGGCTTCGGTGGCAGCGCCCGCTGTGAAGGCTGCAGGTCTTTCTCCTGGGGAGAATCAGACACCTGGCCTCCTTTTGGCTCCTGGGGTGAGATGGGGCCAGACGCCTATCAACCAGTCCACACCATGGGAAACGGACGAGCCTCcagccaaacagcacagagaGAGCGACGCCACCGGGCCTCCGTGGGTGCCTCCGGTGGTTGCGGTCAGTCAGCCCAGCCTGTTAGCCCACTCCTACGGGATGCCTCAGCCCCCGGTCTACAGCCAGGGAgtttctgtccagtctccagtcATAGGTGTAACCCCAGCCATTCAGACCCCAGTAGTCCCCCATCATCCCCTCATGACCGCCCACTTCCAAGTACCCCCCCACTCCGCACAGCCCCCGCACGGCCTGGTGCTCAGCCTACCGAACCAGTCGCCTTACGCCACCAGCCAGCCGCCCATCGCCCCGTCGCCCTTGACGACCGGAGGGCAAGTAGCCCACCCGGCCCCTCAGACCGTATTGGGCAACGGTCACCTGACCCACCCGCTCATGCAGCCTCCCGCTTTGCCTTCTGCCGCACTGCCGCTCACCAACGGGCAGGCAGCCCCTCATCCCCCGCCGGCCTCAGCTAATCAGGAGGGTCCAAACGGGCTTCAGATGCTTCGTACGGTCGGGATGGGGAAGTACGAGTTCACAGATCCCGGACACCCTAAAGAGATGTTGAAGGAGCTGAACCAGCAGCGCAGGGAGAAAGAATTTACAGACCTGAAAATTATAGTTGAAGGCAAAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGACCTGGTGAAAAGGTCACTTGGGGAGACGGGCAGTGGAGAGAAGCTGGAGCTGAAGATGACTAACATCAGCGCTGATGTTCTGGACATGCTTTTGGAGTTCGTCTACACCGGCTCACTGGTCATCGACTCGGTCAACGCTAAGACTCTGCTGGAGGCTGCCAACAAGTTCCAGTTCAACACCTTCTGCAAAGTCTGCGTGTCTTTCTTAGAGAAGCAGCTGACGGCGGGCAACTGCCTGGGGGTGCTGGCCATGGCCGAGGCAATGTGCTGCACGGAGCTCCACAACATGGCCAAAGCCTTCGCCCTGCAGAATTTCCCAGAAGTGGCCGGCCAGGACGAGATCCTCAGCATCTCCAAAGCGGACCTGGTCAGCTACCTGTCCAACGACAGCCTCAACACCAAGGCAGAGGAGCTGGTCTATGAGACGGTCATCAAATGGATCAAAAGGGATCCAGTCAACAGAGTGCAGCACATATCCGAGTTGCTGGCAGTAGTGAGGCTGCCGTTCATTCACCCCAGCTATCTGCTGAATGTGGTGGACAACGAGGAGCTGATCAAGTCGTCTGAGGCCTGCCGAGACCTGGTGAACGAGGCCAAGCGCTACCACATGCTGCCACACGCACGGCAGGAGATGCAGACGCCCCGCACTCGGCCACGGCTGTCTGCAGGAGTAGCAGAGGTGATCGTGCTGGTCGGAGGTCGACAGGCCATCGGCATGAATCAGCGCTCCCTCACGGCGGTCACCTGCTACAACCCTCAGAACAGCAAGTGGTACCCTCTCGCCAGCCTGCCTTTCTACGACCGAGAGTTCTTCAGCGTCATCTCAGCGGGGGACAACATATATCTTTCAGGTGGTACAGAGTCAGGGGTTACGGTGGCAGATGTTTGGTGCTACATGTCCCTGCTGGACAACTGGAATCTGGTGTCCCGCATGACTATACCACGCTGCAGACACAACAGCCTGGTGTACGACGGGAAGCTCTACACTATTGGAGGACAGGGAGTGGCTGGAAACCTGGATCATGTTGAGAGATATGACACCATCACTAACCAGTGGGAGACAGTGTCTCCACTGCCCAAGCCTGTCCACTCAGCAGCAGCCACTGTGTGCGGGGGGAAGGTGTACGTGTTCGGAGGGGTGAATGAAGCTGGACGATCGGCTGGAGTCCTGCAGTCTTACGTCCCTCAGACCAACACCTGGAGCTTCATAGAGTCGCCTATGATTGACAACAAGTACGCCCCTGCCGTAAGCCTCAACGGATTCATCTTCATCCTGGGCGGAGCTTACGCCAGAGCCACCACAATCTACGACCCGGACAAGGGCAACATCAAAGCGGGGCCAAACATGAACCACTCCAGACAGTTCTGCAGTGCGGTCATCCTTGACGGGAAGATCTGTGCCACAGGAGGCATTGTGAGCAGCGAGGGGCCGGCGCTGGGCAACATGGAAACCTTTGATCCTGCTACCAAAACGTGGACACTCCTACAGAACCTGCCCTGCCCGCTCTTCAGACACGGCTGCGTAGTGATCAAGAAGTACATCCAGAGCGGCTGAACCGCGGCCCAGGCGCACGGCCCTTCTCCTCGGCGCACTGCAGGgatcaaagacaaaaaaaatcgcaGAGTGTGTGTCTGACATTAAAGAGACTGGTGTCTCCCAGGCTGGCTCCCCACAGACTCCCACCAGCTGTCCTGATGGACGGACTGGAGCGGAATCCCGACGCTCCGCGGGTCCAGACTCTGTACGGGGTGCTGTAGAGTAGCGTAGCCCCTCGCTCTCACAGGTGTTGTGCCATTTGAACACTATGCTATCTGAATACCAAGCCTGTCGTTCCAATCTGTTTTCCTTTGTCTGAAATTCAGACGTGTTCTTTTCTTACCTTTTTCCtttgatgtttctttttttatgtctttttttttcccaatcaCATCTGTCCCCTTTagtcaaaacaaacacacacatcatttTTTCCATGAGCACATCTCTCTTATAAAAAAGATGCCGAATTCAAAAGAGTTTGTTTCCTCTTACAGTTTATCTCACTCTTCTTGTCATGGCGTGACTTTGCAggacaatacaatacaatagagCTTCTCTTATCTGTTCAGAAGGACAAAGCTACAGCAGAAGCTTCCGTAAACATATCAGAAAGGGCATTACTTCACTCCCAAACAGAATGGAGGCTTACTCTCAGGGCTGTTTAACGCGGTCCCTGCGGTCCGACAGTAAGAACACGGTCACATGACGACACGTCACATCATCATACAGAAAGAACCGGACCAGATGAAGACGTGATTGTTCGGaagatctttattttatttttttccccctggaACACAGCCAAAGCACAATCTGCTCATCATTCTGAGagggaagctctgcatctcacCCCCTCACCACCAGCTGAAGCAGGAGCTGTGGGAGCAAGAGCTGGGGGTCCTGTATCATaggaaaggaaatatgtatattttaaaacgGAGGGTAATTctgtataaatgtttttagaatCATTGGTTAGGTTGGACAAAAATGTCTGTAAATCTGTACCCAAAAGGGACCATTTACATATGTTATTAATGATGAAACATAATATACATATCCAAAATTCTAAA

Function

symbol description
klhl29 Orthologous to human KLHL29 (kelch like family member 29).

NR:

description
PREDICTED: kelch-like protein 29

GO: NA

KEGG:

id description
K10465 KLHL29, KBTBD9; kelch-like protein 29

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229706.2 True 4175 mRNA 0.55 14 44983244 45315255

Neighbor

gene id symbol gene type direction distance location
LOC103027014 mfsd2b,si:dkeyp-115a10.3,LOC107750078,LOC107697177 coding downstream 132151 44808826 ~ 44851093 (-)
mut mut,LOC107726757,LOC107697172,LOC107726528 coding downstream 223039 44737167 ~ 44760205 (-)
LOC103028241 runx2b,runx2,LOC103028241,LOC108410521,LOC108258149,LOC107678859,LOC107726745 coding downstream 407969 44525886 ~ 44575275 (-)
LOC103042571 stmn4,LOC108439832,LOC108257558 coding downstream 615404 44360099 ~ 44367840 (-)
LOC103041948 LOC108439850 coding downstream 658787 44321703 ~ 44324457 (-)
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding upstream 43655 45358910 ~ 45365846 (-)
LOC103023605 napb,LOC106610947,LOC106599679,LOC103023605,LOC108411873,LOC108258064,LOC107756672,LOC107742707,LOC107593246,LOC107667620 coding upstream 126183 45441438 ~ 45448166 (-)
gpcpd1 gpcpd1,LOC107697181 coding upstream 136031 45451286 ~ 45465612 (-)
trmt6 trmt6,LOC107593280 coding upstream 186396 45501651 ~ 45512516 (-)
fermt1 fermt1,LOC106571740 coding upstream 199940 45515195 ~ 45531393 (-)
G26290 NA non-coding downstream 118178 44862184 ~ 44865066 (-)
G26278 NA non-coding downstream 129673 44853068 ~ 44853571 (-)
G26240 NA non-coding downstream 284329 44698411 ~ 44698915 (-)
G26238 NA non-coding downstream 294422 44683188 ~ 44688822 (-)
LOC111197214 NA non-coding downstream 367663 44614210 ~ 44615581 (-)
G26386 NA non-coding upstream 93178 45408433 ~ 45410036 (-)
LOC111191909 NA non-coding upstream 282332 45597587 ~ 45604161 (-)
LOC111197418 NA non-coding upstream 418061 45733316 ~ 45742850 (-)
G26563 NA non-coding upstream 527919 45843174 ~ 45844931 (-)
G26564 NA non-coding upstream 532362 45847617 ~ 45849592 (-)
G26295 atad2b,LOC107697175,LOC107603081 other downstream 97443 44882778 ~ 44885801 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other downstream 112554 44856099 ~ 44870690 (-)
fkbp1b fkbp1b other downstream 183739 44769264 ~ 44799505 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 1083484 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 1304382 43675025 ~ 43678862 (-)
G26388 NA other upstream 120854 45436109 ~ 45437585 (-)
G26588 NA other upstream 619898 45935153 ~ 45935622 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other upstream 976832 46292087 ~ 46292806 (-)
naa30 naa30,LOC108270341 other upstream 1112162 46427417 ~ 46435925 (-)
G26695 prpf39,LOC107729032 other upstream 1203616 46518871 ~ 46525996 (-)

Expression


Co-expression Network