mut (mut,LOC107726757,LOC107697172,LOC107726528)


Basic Information

Item Value
gene id mut
gene name mut,LOC107726757,LOC107697172,LOC107726528
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44737167 ~ 44760205 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229716.2
GAGTCGGCGGGCTCTCTGATTGGTGTATTGTGAGTTGTTGTCGTAGGTGATTGGCTGGGATAACAGAATACTGACAGTACGGTTGGAGCATAAGGGAAGCTCGCAAGGCGTCTCATGAGTGACTAAGTGTGTCTGGCAAAATGTTGACCGCAGGAAAGACGTGCTCGTCTCTGGCAGCTAGACGGCTGCTGGGTGCGTACAGCTCTGTTTGTCCCGTACTGGATCAGCAGTGCCGTTCCCAACGTTTCCACACAGCAGTTCCACGCAGAGATGAGGTGCAGCTGCATGAGGCCTGGGCTGCTCTGGCCAAGAAGCAGCTTAAAGGAAAGAACCCAGAGGACTTGATCTGGCGCACTCCAGAGGGCATCTCCATCAAGCCCGTCTACACACAGACGGACACGGCTGCAGTCGCTGATGAGTTGCCTGGTGTCTTTCCTTACACCAGAGGGCCCTATCCCACCATGTACACCTTCAGACCCTGGACCATCAGACAGTACGCCGGCTTCAGCACAGTGGAGGAGAGCAACAAGTTCTACAGAGACAATATTAAAGCGGGCCAGCAGGGCCTGTCTGTGGCCTTTGACCTGCCCACACACAGGGGATATGACTCAGACAATCCCAGAGTTCATGGCGATGTGGGTATGGCAGGTGTGGCAATCGACACTGTGGAGGACATGAAGATGCTGTTTGATGGAATTCCACTGGAGAGGATGTCTGTTTCTATGACCATGAATGGGGCAGTGATTCCCATCCTGGCCATGTTCATAGTAACTGGTGAGGAGCAGGGCGTGGACAAGGCCAAGCTGACAGGAACCATCCAGAACGACATCCTGAAAGAGTTTATGGTCCGAAACACTTACATCTTCCCTCCAGAGCCCTCCATGCATGCCATTGCTGACATATTTGCCTATACATCCAAGAACATGCCCAAATTCAACTCCATCTCAATCAGTGGCTACCATTTGCAAGAGGCTGGTGCTGATGCAATCTTGGAACTGGCCTACACTATTGCTAATGGACTAGAGTACTGCAGAACTGGCCTAAAGGCTGGCCTCACCATTGACGAGTTTGCACCCAGGTTATCGTTCTTCTGGGGCATTGGGATGAACTTTTACATGGAGATAGCCAAAATGAGAGCAGCACGGCGTCTCTGGGCAACTCTGATTAAAGAAAAGTTCCAGCCGAAGAACTCCAAATCTCTTCTGTTAAGGACTCACTGTCAGACTTCAGGGTGGTCCCTGACTGAGCAGGACCCCTACAACAACGTGATCCGGACGGTAATTGAGGCCATGGCTGCAGTCTTTGGAGGCACACAGTCTCTACACACAAACTCGTTCGATGAGGCGCTGGGTCTTCCAACCGTCAAGAGTGCTCGCATCGCCCGCAACACCCAGATCATCATTCAAGAGGAGTCCGGGATCCCAAAAGTGGCCGACCCCTGGGGTGGTTCATACATGATGGAGGCTCTCACTAGTGATGTGTACAATTCAGCCATGAAGTTCATTGAAGAGATTGAGGACATGGGAGGAATGGCTCGAGCCGTGGCTGAGGGAATCCCCAAACTGCGTATAGAGGAGTGTGCTGCACGTAGACAAGCTCGCATTGATTCAGGTACTGAGGTCATTGTTGGAGTCAACAAGTATCGTCTGGAGAACGAAGAGACCGTGGATGTCCTGGCCATCGACAACACAATCGTCCGCAATAAGCAAATTGAAAAGCTTCAGAAGGTGAGGGAGGGCAGAGATGCAGATGCAGCGAAGAGATGTCTTGCTGCTATAGAGCAATGTGCTCAGACCAGAAATGGCAACCTGCTGGAACTGGCTGTGCAGGCTGCACGAGCGAGGTGTTCAGTGGGAGAGATCACGGACGCGATGAAAGCGGTTTTCGGAGAGCACAAAGCCAGCACGCGCATGGTGAGCGGTGCATACCGCAGCGAGTTTGGCGAGCATGAGGAAATTGCTCTGGCGCACAGCCGGGTTCTCCAATTCAAGAAACATGAGGGAAGGAATCCTCGCCTGCTGGTAGCCAAAATGGGACAGGATGGTCATGACAGGGGTGCAAAAGTCATCGCCACAGGGTTTGCGGATTTGGGATTTGATGTGGATATTGGGCCACTTTTCCAGACCCCGCTGGAGGTGGCTCAGCAGGCGGTGGATGCAGATGTGCACTGTGTGGGGGTCAGCACGCTGGCGGCTGGACACAAAACCCTCGTTCCCGAACTCATCAAGGAACTGCGCAACCTAAATCGCCCAGACATTCTGGTTATCTGCGGAGGAGTCATCCCCCCACAGGACTATGAGTTTCTGTACCAGAGTGGAGTTTGCTGTATCTTCGGTCCAGGAACAAGAATCCCTCAAGCAGCAGTGGAGGTCGTGGACAACATAGAGAAGAGTCTGGAAAAAAATCGTCAGGCTATGTAACTGAGAGATCTGGAACGTTTTAGTGAGGGAGATTCTTCGTGGCAGTTTTTGGAATGTCATGGGGGAGGCATTTATCTTGGAACAAGATGTTGAAATTTGATGGCGCTATGGTTGTTAAGCgttactgtttttctttttgaaatTCAGCTGTTAAATCAGACCACTGTAAGAGTTGAAGTGTTTCAGATTTGAGAATTGCAGCGCACATAAATCAACAGAGTGATGATAGTAACACTGCTGAATCATTTTCATAATGTTGGTTGTGGCTTCAGTTTAAGGTAAAGGTGatttataaaggctttataatgAGATTGTGCTCCATAATGATGCTTTGTACGCAGGGCTTGGGGGTCAACAACTGTGTGTCAGCTTTGttcatattgtgtttttttttttcagtaatccACCAAATCTATTTTGCTACATTGACTGGAATTTCATTAGAAGACTGTCGATTTCAATCTCAGTGCTTCTTTCCCTGCATGATGCATCTTACATTAGTAGTCCTCAATGATCTATAGTAGGTTTAATAAGTTTAATAAGACATTGGGCTGTTTCTGTGCAGTGTTGGGTTTGACAGCTGTGCCTTATGGGTGTTTTTAAGTTTTGTCTTTATCGTATTCAGCACTGTACATTGGCACAAATGTTTCAAGCACGTACTCCACTGTTCTGCTTAAGTTTCTGGCACCTCCTGAGCTGGTTGTTGATGTTTAAGATACTAATATTAAACCCCTGCATTAagagaaaatgtgcaaaaaaatgttttgaatcattcgTACCTCACACCTTGGTTCAGCCTAATCTTAATAAAGTCTGAGATTCACCTCA

Function

symbol description
mut Predicted to enable methylmalonyl-CoA mutase activity. Predicted to be active in mitochondrion. Used to study methylmalonic acidemia. Human ortholog(s) of this gene implicated in methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency. Orthologous to human MMUT (methylmalonyl-CoA mutase).

NR:

description
methylmalonyl-CoA mutase, mitochondrial isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004494 methylmalonyl-CoA mutase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0031419 cobalamin binding molecular_function

KEGG:

id description
K01847 MUT; methylmalonyl-CoA mutase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229716.2 True 3248 mRNA 0.49 13 44737167 44760205

Neighbor

gene id symbol gene type direction distance location
LOC103028241 runx2b,runx2,LOC103028241,LOC108410521,LOC108258149,LOC107678859,LOC107726745 coding downstream 161892 44525886 ~ 44575275 (-)
LOC103042571 stmn4,LOC108439832,LOC108257558 coding downstream 369327 44360099 ~ 44367840 (-)
LOC103041948 LOC108439850 coding downstream 412710 44321703 ~ 44324457 (-)
LOC103028959 NA coding downstream 419330 44311254 ~ 44317837 (-)
LOC103040630 znf395 coding downstream 428469 44298947 ~ 44308698 (-)
LOC103027014 mfsd2b,si:dkeyp-115a10.3,LOC107750078,LOC107697177 coding upstream 48621 44808826 ~ 44851093 (-)
klhl29 klhl29,LOC107667613,LOC107742703,LOC107697176 coding upstream 223039 44983244 ~ 45315255 (-)
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding upstream 598705 45358910 ~ 45365846 (-)
LOC103023605 napb,LOC106610947,LOC106599679,LOC103023605,LOC108411873,LOC108258064,LOC107756672,LOC107742707,LOC107593246,LOC107667620 coding upstream 681233 45441438 ~ 45448166 (-)
gpcpd1 gpcpd1,LOC107697181 coding upstream 691081 45451286 ~ 45465612 (-)
G26240 NA non-coding downstream 38252 44698411 ~ 44698915 (-)
G26238 NA non-coding downstream 48345 44683188 ~ 44688822 (-)
LOC111197214 NA non-coding downstream 121586 44614210 ~ 44615581 (-)
G26158 cdc42bpb,LOC106607646 non-coding downstream 292205 44441661 ~ 44444962 (-)
G26154 NA non-coding downstream 359640 44377323 ~ 44377527 (-)
G26278 NA non-coding upstream 92863 44853068 ~ 44853571 (-)
G26290 NA non-coding upstream 101979 44862184 ~ 44865066 (-)
LOC111197337 NA non-coding upstream 352333 45112538 ~ 45113961 (-)
G26345 NA non-coding upstream 382685 45142890 ~ 45160930 (-)
G26347 NA non-coding upstream 479696 45239901 ~ 45240218 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 837407 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 1058305 43675025 ~ 43678862 (-)
LOC103027084 LOC108416115,LOC103358919 other downstream 1220010 43495419 ~ 43517157 (-)
G25785 NA other downstream 1625766 43098822 ~ 43111401 (-)
G25678 NA other downstream 2018778 42717666 ~ 42718389 (-)
fkbp1b fkbp1b other upstream 9059 44769264 ~ 44799505 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 95894 44856099 ~ 44870690 (-)
G26295 atad2b,LOC107697175,LOC107603081 other upstream 122573 44882778 ~ 44885801 (-)
G26388 NA other upstream 675904 45436109 ~ 45437585 (-)
G26588 NA other upstream 1174948 45935153 ~ 45935622 (-)

Expression


Co-expression Network