LOC103043020 (LOC103043020,LOC108411620,LOC108258012,LOC103375802)


Basic Information

Item Value
gene id LOC103043020
gene name LOC103043020,LOC108411620,LOC108258012,LOC103375802
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46352209 ~ 46360826 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007230704.3
ATCGAACAGCTCTAGTTCTCACTACAACCCGGAAGGAGACGGAGCCGAGctttgtgtttgtggtgtgcgGTGTTGTGTCCGGGCGGACTGTGAGCGCGGTGATGATGGCATTTGGACGGCCAGGATAAAAAAGTTTCAACAGTTGTAATGTGAAGGCTGTTTTAGACCCAGTCTTCCTATGTATCCACATCAGCAGGATCATATAAGACTGAATCCATGCTTTCTGATGAGCTTGACTCCAAACCTGAGCTGCTGGTTGAGTTTGTGCAGAACGCCTCCATACCGTTGGGCCAGGGCCTGGAGGAATCAGACCCTAAGACACCGTGTCTACCTCTCCTTGCCTCTTCTGAAAACTCCATATGCAGCCAGCTAGACCTTCAAGAGAGTACTCTTAGCCATGCGGCTTCTCCATCACTGTCAGAGTTTGGGCCAGAGCGAAGCCCCCTGGTTGTGCAGCTTCAGTCTCACTCCCCAACGACAAGCCCACCGGCACTACTTCAGGAACTTCAGCAACCAGACAGCACCTCTTATGTCCTGCTCAACCTTGCTAAAGGGTTGGCAGCATCCGCGGAGCCGCTGGTGTTTGTGCAGGATGACGTGGATGAGGCAGAGGAGGAGATTTCTGCAGGAGAGTGTGGAGATGGGAGCGCCCCGTGGTACCTGCGGGTGCAGGAGTTGGCCCACGACAGCCTGATCGCTGCCACCCGAGCCCAGCTGGCAAAGGAAGCCAGGGCTAGTAGCAACAGTGACCATATTCACAGCTACCAGACAGAGGCACCAAAAAAGGAGCAACCACCACGGAACAGTCGTACATCTGCAGAGAAGATTCTTAGGTGTCCTTATGAGAACTGCCACAGGACATTTACCTGGCCTGCACATCTGAAGTATCACCTTAAAACACACAGGAATGACCGCACATTCCGCTGCGGAGCTGAGGGCTGTGGAAAGAGCTTTTACGTGCTGCAGAGACTGCAGGTGCACATGAGGACGCACAATGGCGAGAAACCCTTCATTTGTAATGAGAAGAACTGTGGCAAAAAGTTTACCACAGCCGGTAACCTGAAGAACCACAAACGTACACATACTGGTGAGAAGCCCTTCCTTTGTGAAGCAGACAATTGTGGACGTTCCTTTGCAGAATACTCCAGCCTACGCAAACACATGCTGGTGCATTCTGGAGAGAAGCCTCATCAGTGTTCCATATGCGGGAAGACGTTCTCTCAGAGTGGCAGCAGAAACGTCCACATGAGGAAGCGTCATGGAGAGGATGCTCTCAGTTCAGAAAGCAGAGAAACAGGAGAGGCTCTGACTCACAGCAGTTTGTTAGAGGCTGATGGTGCGGTTGGTGAGTCCATGGTAACCATGACAACAGTTGTGGAGCCAGTTAATCTACACCATGCAATGCTGAGGGCACAAGACCCAGTCGTGGTACTCTCTCCACCTCATGATCTGGTCTCTGGAGGTCATGGTTATGGGGAGGACGTTGTGGCATTGCTATAGTagtatttgtaaataaagtaattattgaGTTCATGta
>XM_022687038.1
ATCGAACAGCTCTAGTTCTCACTACAACCCGGAAGGAGACGGAGCCGAGctttgtgtttgtggtgtgcgGTGTTGTGTCCGGGCGGACTGTGAGCGCGGTGATGATGGCATTTGGACGGCCAGGATAAAAAAGTTTCAACAGTTGTAATGTGAAGGCTGTTTTAGACCCAGTCTTCCTATGTATCCACATCAGCAGGATCATATAAGACTGAATCCATGCTTTCTGATGAGCTTGACTCCAAACCTGAGCTGCTGGTTGAGTTTGTGCAGAACGCCTCCATACCGTTGGGCCAGGGCCTGGAGGAATCAGACCCTAAGACACCGTGTCTACCTCTCCTTGCCTCTTCTGAAAACTCCATATGCAGCCAGCTAGACCTTCAAGAGAGTACTCTTAGCCATGCGGCTTCTCCATCACTGTCAGAGTTTGGGCCAGAGCGAAGCCCCCTGGTTGTGCAGCTTCAGTCTCACTCCCCAACGACAAGCCCACCGGCACTACTTCAGGAACTTCAGCAACCAGACAGCACCTCTTATGTCCTGCTCAACCTTGCTAAAGGGTTGGCAGCATCCGCGGAGCCGCTGGTGTTTGTGCAGGATGACGTGGATGAGGCAGAGGAGGAGATTTCTGCAGGAGAGTGTGGAGATGGGAGCGCCCCGTGGTACCTGCGGGTGCAGGAGTTGGCCCACGACAGCCTGATCGCTGCCACCCGAGCCCAGCTGGCAAAGGAAGCCAGGGCTAGTAGCAACAGTGACCATATTCACAGCTACCAGACAGAGGCACCAAAAAAGGAGCAACCACCACGGAACAGTCGTACATCTGCAGAGAAGATTCTTAGGTGTCCTTATGAGAACTGCCACAGGACATTTACCTGGCCTGCACATCTGAAGTATCACCTTAAAACACACAGGAATGACCGCACATTCCGCTGCGGAGCTGAGGGCTGTGGAAAGAGCTTTTACGTGCTGCAGAGACTGCAGGTGCACATGAGGACGCACAATGGCGAGAAACCCTTCATTTGTAATGAGAAGAACTGTGGCAAAAAGTTTACCACAGCCGGTAACCTGAAGAACCACAAACGTACACATACTGGTGAGAAGCCCTTCCTTTGTGAAGCAGACAATTGTGGACGTTCCTTTGCAGAATACTCCAGCCTACGCAAACACATGCTGGTGCATTCTGGAGAGAAGCCTCATCAGTGTTCCATATGCGGGAAGACGTTCTCTCAGAGTGGCAGCAGAAACGTCCACATGAGGAAGCGTCATGGAGAGGATGCTCTCAGTTCAGAAAGCAGAGAAACAGGAGAGGCTCTGACTCACAGCAGTTTGTTAGAGGCTGATGGTGCGGTTGGTGAGTCCATGGTAACCATGACAACAGTTGTGGAGCCAGTTAATCTACACCATGCAATGCTGAGGGCACAAGGCCCTGCAGACCCAGTCGTGGTACTCTCTCCACCTCATGATCTGGTCTCTGGAGGTCATGGTTATGGGGAGGACGTTGTGGCATTGCTATAGTagtatttgtaaataaagtaattattgaGTTCATGta

Function

NR:

description
zinc finger protein 410-like isoform X2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007230704.3 False 1537 mRNA 0.51 12 46352209 46360826
XM_022687038.1 True 1546 mRNA 0.52 12 46352209 46360826

Neighbor

gene id symbol gene type direction distance location
LOC103042705 samd15 coding downstream 14668 46329406 ~ 46337541 (-)
LOC103029737 lrfn5b,LOC108411613,LOC108257655,LOC107712211,LOC107564320 coding downstream 23099 46317964 ~ 46329110 (-)
LOC103025714 NA coding downstream 222967 46108572 ~ 46129242 (-)
LOC103025404 NA coding downstream 246040 46078208 ~ 46106169 (-)
pak5 pak5 coding downstream 296271 45948028 ~ 46055938 (-)
LOC111194350 NA coding upstream 3303 46364129 ~ 46374917 (-)
LOC103044046 NA coding upstream 26833 46387659 ~ 46395067 (-)
LOC107197829 NA coding upstream 35673 46396499 ~ 46404613 (-)
actr10 actr10,LOC106608088,LOC106571574 coding upstream 49630 46410456 ~ 46416421 (-)
peli2 peli2,LOC103047193,LOC108410474,LOC108258111,LOC100334245,LOC107567396,LOC107574485,LOC106571579 coding upstream 119819 46480645 ~ 46499667 (-)
G26605 NA non-coding downstream 190110 46076136 ~ 46162099 (-)
G26612 NA non-coding downstream 285021 46066648 ~ 46067188 (-)
G26564 NA non-coding downstream 502617 45847617 ~ 45849592 (-)
G26563 NA non-coding downstream 507278 45843174 ~ 45844931 (-)
LOC111197418 NA non-coding downstream 609359 45733316 ~ 45742850 (-)
G26663 NA non-coding upstream 892 46361718 ~ 46361918 (-)
G26666 NA non-coding upstream 35135 46395961 ~ 46409064 (-)
LOC111197648 NA non-coding upstream 217461 46578287 ~ 46599431 (-)
G26751 NA non-coding upstream 301293 46662119 ~ 46663963 (-)
G26771 NA non-coding upstream 744489 47105315 ~ 47106324 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other downstream 59403 46292087 ~ 46292806 (-)
G26588 NA other downstream 416587 45935153 ~ 45935622 (-)
G26388 NA other downstream 914624 45436109 ~ 45437585 (-)
G26295 atad2b,LOC107697175,LOC107603081 other downstream 1466408 44882778 ~ 44885801 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other downstream 1481519 44856099 ~ 44870690 (-)
naa30 naa30,LOC108270341 other upstream 66591 46427417 ~ 46435925 (-)
G26695 prpf39,LOC107729032 other upstream 158045 46518871 ~ 46525996 (-)
fkbp3 fkbp3 other upstream 172869 46533695 ~ 46535835 (-)
G26754 NA other upstream 343521 46704347 ~ 46738736 (-)
LOC103039734 LOC108424428 other upstream 1856680 48217506 ~ 48324662 (-)

Expression


Co-expression Network