G58421


Basic Information

Item Value
gene id G58421
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14050977 ~ 14051404 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66536
ACAAGACAAAGCAGGTTACTTTTGATATGAAACAAAGTCTCAAATTTCAATTTTTTTCATTTTTAAAAACATTTAAACAATAAATACCATTTTGTGGCTCTTTAATGTGTCGTGACAGATCGCTGTAGTGCCTCAGTTCAAGCGGCTCGTGAACCAATCATCTCTTCCTACCAGCAGCCATATCACCCTGTAGCCCATGACTGGTTGCCCACTGAAGCTAAGCAGGGCTGAGCCTGGTTAGTACCTGGATGGGAGACCTTCTGGGAAAACTAGGTTGCTGCTGGAAGAGGTGTTAGTGAGGCCAGCAGGGGGTGCTCACCCTGTGGTCTGTGTGGGTCCTAACACCCCAGTATAGTGATGGGGACACTATACTGTCAAAAAGCACCGTCCTTCGGATGAGACTTTAAACCGAGGTCCTGACTCTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66536 True 428 lncRNA 0.46 1 14050977 14051404

Neighbor

gene id symbol gene type direction distance location
CI01000009_14039505_14043545 RETSATL coding upstream 7368 14039209 ~ 14043609 (+)
CI01000009_14033666_14036472 RETSATL coding upstream 14505 14033559 ~ 14036472 (+)
CI01000009_14007631_14010487 NA coding upstream 40284 14007087 ~ 14010693 (+)
CI01000009_13942733_13946356 FRZB coding upstream 104572 13942521 ~ 13946405 (+)
CI01000009_13884165_13939556 NCKAP1 coding upstream 111289 13883847 ~ 13939688 (+)
CI01000009_14095330_14128580 NA coding downstream 42241 14093645 ~ 14128582 (+)
CI01000009_14170062_14192930 NA coding downstream 117817 14169221 ~ 14193332 (+)
CI01000009_14242224_14243004 NA coding downstream 190713 14242117 ~ 14243724 (+)
CI01000009_14264935_14273006 NA coding downstream 212019 14263423 ~ 14277555 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding downstream 245047 14296451 ~ 14314349 (+)
G58384 NA non-coding upstream 32504 14011905 ~ 14018473 (+)
G58388 NA non-coding upstream 46895 13996825 ~ 14004082 (+)
G58389 NA non-coding upstream 72373 13975388 ~ 13978604 (+)
G58310 NA non-coding upstream 215098 13833541 ~ 13835879 (+)
G58301 NA non-coding upstream 302154 13745821 ~ 13748823 (+)
G58467 NA non-coding downstream 46087 14097491 ~ 14097703 (+)
G58489 NA non-coding downstream 73916 14125320 ~ 14156231 (+)
G58452 NA non-coding downstream 147234 14198638 ~ 14201846 (+)
G58456 NA non-coding downstream 253536 14304940 ~ 14399351 (+)
G58382 NA other upstream 11076 14039757 ~ 14039901 (+)
G58028 NA other upstream 907369 13140378 ~ 13143608 (+)
G57701 NA other upstream 1027839 13006643 ~ 13023138 (+)
G57691 NA other upstream 1132512 12906444 ~ 12918465 (+)
G57682 NA other upstream 1158638 12825469 ~ 12892339 (+)
G58455 NA other downstream 195291 14246695 ~ 14258526 (+)
G58558 NA other downstream 445532 14496936 ~ 14501514 (+)
G58649 NA other downstream 598320 14649724 ~ 14652022 (+)
G58711 NA other downstream 715255 14766659 ~ 14773773 (+)
CI01000009_14857765_14859526 NA other downstream 767815 14857713 ~ 14859636 (+)

Expression


Co-expression Network