ywhaq (ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239)


Basic Information

Item Value
gene id ywhaq
gene name ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41534105 ~ 41545497 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235253.3
GCGAAAGTGGACGTCAGAAAAGGTTCCGATTGGATTAGAGGGCTGCTGACCACGCCCTCTCTTTTCAGGTTCGGTTGGACGTTAATCGGAGTCTTTTCTCCCTCCGAAGACAGCCGAAGCGGGCAGCGCGGTAGTGGAGCCCCGGTAGAAGGTCCGTTGGTCGGTAGCTAAACCCTGGATTACTTTACCCGTTCCTTTGTTTCTTCGTGTCTGAGCCACTCCTCTCCTTCCTTTCACTGATTCTCCTTCCTTAACCTCCACCTGGACTCGCCGCTCTGCCGGAGTTAGTAAACACAGTCTTCAGCTAGCTTTCTCTCCGCCATCTAAAACCATGGATAAAACGGAGCTCATTCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCGGCGTCCATGAAGCTGGTGACAGAGCAGGGCAGCGAGCTCACGAACGAGGAGAGGAACCTGCTGTCCGTTGCCTACAAGAACGTGGTGGGGGCACGGAGGTCAGCGTGGAGGGTCATCTCGAGTATTGAGCAGAAGACGGAGGGCAGCGACAAGAAACTTCAGATGGTGAAGGAGTACAGGGAGAAAGTGGAGGAAGAGCTGCGCGAAATTTGCAACGACGTGCTGGGGCTTCTGAGCAAATATTTGATTGAGAACTCCTCCAGTGCTGAGAGCAAAGTCTTCTATTTAAAGATGAAGGGTGACTACTACAGATATCTTGCAGAGGTTGCCTCAGGAGATGATAAGAAGGATACGATAAGTAATTCGCAGAGCGCTTACCAGGATGCATTTGACATTAGTAAGAAAGAGATGCAACCTACGCACCCCATTCGCCTGGGTCTGGCCCTCAACTTTTCCGTCTTCTACTATGAAATCCTTAACTCTCCTGAGCAGGCTTGTGCCCTGGCTAAGCAGGCTTTTGAtgaagccattgcagagcttgATACGCTGAATGAAGACTCATACAAAGACAGCACACTCATCATGCAGCTGCTTAGAGACAACCTCACATTATGGACGTCTGACAATGCAGCAGATGAGGGTGAAGGAGGAGAcggaggagagaactaagaccCTGTGTGTTCTCTCCACAgttaaaagaaaagtaaaaaaagaaaaaaaaaatttttacacATCTCCATTCCTTATTGTTTCACGTATGATTATTCTAGCCCTGTAAATCCATGATCATTACCAATGAGCTGTGTGTAAGGAAAATTCCAGTCATcctgatttatttttcttccccCACCCTCCTTCCACCCCCCACCTTGCTTGTGGTGGTcatcaaaaacattacattaaggTAACTCCTCCATTCCTCCTTTGGTTTTGTGGTTTTGTCATTTTGGCCTGTATGTGCAGTGTCTGCTGTAGAAAAGCATTAGCCTCACATTGCATTAACAGTCTGTTAATGGTCAGAGAACAACTAGTGTATGCCGACTGCAAATTTGGTAAATTAGAAATGTCAGTAACGAGCAAAGACTGCCTTGGGCAGAGCATTGGCCAGCACACGTCTTGCTGACGATTAAATCCTGGTGGACCATCATGGCTTGAACACTCCTTCACTCAAGTACTGTTCAGATGAAAGGTTGCTGTTTTTCATCTGCTCACTGTTCtgtaatttctttctttttttaaccctcTCTTCCTTCTCAGCAGGCTCTTTTAGCCAGGGCTTCTTGGAAGTCACAAAATAAAGCACTCCTTCCTCACGAAATTCACTTTGTGTTACTTTGAAGCATGTCTTGAGTCAAATGGTGCCACTATGAAGGCTTGTAATAGACTTAAACAGtcatatgattaaaaaaagaccATGCATGCCCATTTTTCAGTGTACACTGGTATGGGAACTGATCTTGCATACACACTGCTCCACTGTTTGGTTAAATACTTTCATTGCAGGTTTGTGCACATGTTGAGGATGTTTGATTTGTCCAGTGATGTCGATAGATATTCGAaccactgttgtgtttttgctaATCATTGATTGTAGTCCCCAAGAGCCttgtgaaaatgtttaaatgcccTACGTATCAGCTATGTATCCTGAATTAAAATGACCATTTTATAAACCA

Function

symbol description
ywhaq Enables identical protein binding activity and protein N-terminus binding activity. Involved in negative regulation of transcription, DNA-templated. Located in cytoplasm. Part of protein-containing complex.

NR:

description
PREDICTED: 14-3-3 protein theta

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235253.3 True 2076 mRNA 0.46 6 41534105 41545497

Neighbor

gene id symbol gene type direction distance location
fmn1 fmn1 coding upstream 105935 41403996 ~ 41428170 (+)
aven NA coding upstream 254168 41254714 ~ 41279937 (+)
emc7 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 coding upstream 284534 41244537 ~ 41249571 (+)
katnbl1 katnbl1 coding upstream 291757 41236256 ~ 41242348 (+)
slco5a1 slco5a1,LOC107741005,LOC107686683,LOC108256392,LOC107695420,LOC107584939,LOC107758302 coding upstream 317955 41122279 ~ 41216150 (+)
LOC103041996 LOC108410928 coding downstream 2477 41547974 ~ 41567160 (+)
LOC103038512 asap2,LOC108410950,LOC108257785,LOC105894440 coding downstream 43255 41588752 ~ 41621272 (+)
LOC103039741 mboat2b,LOC103039741,LOC108410960,LOC108257786,LOC107668249,LOC107601827,LOC107693237,LOC107756580,LOC106607658 coding downstream 89458 41634955 ~ 41705390 (+)
kidins220 LOC103040274,LOC108410983,LOC108258057 coding downstream 163273 41708770 ~ 41733546 (+)
rnaseh1 LOC107693208 coding downstream 772026 42317523 ~ 42326404 (+)
LOC111196462 NA non-coding upstream 14810 41507988 ~ 41519295 (+)
G25355 NA non-coding upstream 36366 41495866 ~ 41497739 (+)
G25351 NA non-coding upstream 47837 41485489 ~ 41486268 (+)
G25339 NA non-coding upstream 91566 41439812 ~ 41442539 (+)
G25287 NA non-coding upstream 237417 41293464 ~ 41296688 (+)
G25407 NA non-coding downstream 30786 41576283 ~ 41577638 (+)
G25426 NA non-coding downstream 42602 41588099 ~ 41588458 (+)
G25428 NA non-coding downstream 79284 41624781 ~ 41632161 (+)
G25458 NA non-coding downstream 188506 41734003 ~ 41734204 (+)
G25459 NA non-coding downstream 189090 41734587 ~ 41735710 (+)
G24972 NA other upstream 1708387 39819276 ~ 39825718 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 2136227 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 2193134 39325083 ~ 39340971 (+)
G24719 NA other upstream 2488324 39045170 ~ 39045781 (+)
G24583 NA other upstream 2586883 38939357 ~ 38947222 (+)
G25601 NA other downstream 846143 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 952225 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 1714123 43259620 ~ 43262099 (+)
rps29 NA other downstream 1814972 43360469 ~ 43363444 (+)
G25879 NA other downstream 1876274 43421771 ~ 43422046 (+)

Expression


Co-expression Network