G59602


Basic Information

Item Value
gene id G59602
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14164892 ~ 14214853 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU67870
GTGACACTGAAGACTGGAGTAACAGCTCTGTAAAATTCAATGTTGCATCACAGGAATAAATTACATCTTAAAACGTATTCAAAAAGAAAAGTGTCACTTTAAATTGTAATAATATTTTACAATATTACAGTTTTTACAGTATTTTTGATCAAATGCAGCCTTGGCTTCATTCAAAAACATTATCAAACCCAAACTTTTGAATGGTAGTGTGTGTATGTCTACTTTAATTATGAAAAAAGCCACATGAGACTTGATGCCAACGATTCATGAATTATATTTATCAAAACAGACAGATTCACGGGAATAAATAAATCCTGCCAATTTATCAACACTTTTTTGCTGCTGCGGTCAGCAGACACGAAAACAGGCTCACACTTGCAAGTCACAAGACAAGGAGGGATTGTGCCAATGGACAAAAACACAAAGCATTAAATTCACTGCGATGGTCACAATTTCGATATATAATCGCCTAGCACAAGTGCCTACAGTTCTGATAAAGCACTTAGAGAAACCCTACACATCAGCAACAGGCATAAAGTAACAGTTTGTTTTGAACATCCTACCGGCATTGCTCCACCTTTCTTTCTTTACATGTGATCAATCTCTATTTGAGCATGTTTCACTGCATATTCACTTACCCAAGATTATAAAGCAGTGGATGGTGCTCCGATCTCACACAGCCTTGAACAAGATCTTCCTGCTGAGAGTCTCCACTTCTTCGGGTGTGAATGCGGCGATCGGCACCTCAATACAGATTCAAAGGACCCCCGTCCGCCATTGGAATAAAGTTGAGAGCCCACCTCTAATCTCGATGATGTTCCCGGGAACGATGTAGATCTGTTTGATCACACGAGCGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67870 True 859 lncRNA 0.40 2 14164892 14214853

Neighbor

gene id symbol gene type direction distance location
CI01000009_14052206_14053489 NA coding downstream 110939 14051969 ~ 14053953 (-)
CI01000009_14012800_14024940 ITGB2 coding downstream 139661 14011950 ~ 14025231 (-)
CI01000009_13990326_14004387 VIL1 coding downstream 160066 13989732 ~ 14004826 (-)
CI01000009_13983271_13988001 NA coding downstream 176544 13983208 ~ 13988348 (-)
CI01000009_13975122_13976026 NA coding downstream 187768 13975099 ~ 13978614 (-)
CI01000009_14248805_14255014 NA coding upstream 32790 14247643 ~ 14255775 (-)
CI01000009_14342067_14344332 NA coding upstream 127134 14341987 ~ 14344934 (-)
CI01000009_14476688_14573629 HDAC4 coding upstream 260871 14475724 ~ 14573629 (-)
CI01000009_14626182_14652953 NA coding upstream 410978 14625831 ~ 14653259 (-)
CI01000009_14763341_14773678 NA coding upstream 548359 14763212 ~ 14773681 (-)
G59552 NA non-coding downstream 89059 14075624 ~ 14075833 (-)
G59491 NA non-coding downstream 124999 14039324 ~ 14039893 (-)
G59488 NA non-coding downstream 224264 13939445 ~ 13940628 (-)
G59489 NA non-coding downstream 233211 13883972 ~ 13931681 (-)
G59470 NA non-coding downstream 300289 13826486 ~ 13864603 (-)
G59590 NA non-coding upstream 399245 14614098 ~ 14711193 (-)
G59583 NA non-coding upstream 468016 14682869 ~ 14684152 (-)
G59754 NA non-coding upstream 501265 14716118 ~ 14716332 (-)
G59768 NA non-coding upstream 521164 14736017 ~ 14736281 (-)
G59490 NA other downstream 127019 14033564 ~ 14037873 (-)
G59097 NA other downstream 1875374 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 5304329 8856310 ~ 8860563 (-)
G55814 NA other downstream 5736880 8425821 ~ 8428012 (-)
G59811 NA other upstream 647544 14862397 ~ 14887464 (-)
G59941 NA other upstream 917251 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 1161407 15318811 ~ 15390382 (-)
CI01000009_15654061_15662554 ARPC2 other upstream 1431922 15653760 ~ 15663026 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location