Item | Value |
---|---|
gene id | LOC103043586 |
gene name | mark3b,LOC108412004,LOC107697167,LOC108258043 |
gene type | misc |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035899.1 |
NCBI id | CM008302.1 |
chromosome length | 74127438 |
location | 61831841 ~ 61890729 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
mark3b | Predicted to enable protein serine/threonine kinase activity and tau-protein kinase activity. Predicted to be involved in intracellular signal transduction and microtubule cytoskeleton organization. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in dendrite. Predicted to be active in cytoplasm and plasma membrane. Human ortholog(s) of this gene implicated in visual impairment and progressive phthisis bulbi. Orthologous to human MARK3 (microtubule affinity regulating kinase 3). |
description |
---|
PREDICTED: MAP/microtubule affinity-regulating kinase 3 isoform X5 |
id | name | namespace |
---|---|---|
GO:0006468 | protein phosphorylation | biological_process |
GO:0005524 | ATP binding | molecular_function |
GO:0004674 | protein serine/threonine kinase activity | molecular_function |
id | description |
---|---|
K08798 | MARK; MAP/microtubule affinity-regulating kinase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_007238748.3 | False | 3776 | mRNA | 0.47 | 17 | 61837379 | 61887888 |
XM_022664088.1 | False | 3831 | mRNA | 0.49 | 19 | 61831841 | 61887888 |
XM_022664095.1 | False | 3810 | mRNA | 0.49 | 19 | 61831841 | 61887888 |
XM_022664102.1 | False | 3804 | mRNA | 0.49 | 18 | 61831841 | 61887888 |
XM_022664104.1 | False | 3786 | mRNA | 0.49 | 18 | 61831841 | 61887888 |
XM_022664110.1 | True | 4645 | mRNA | 0.50 | 19 | 61831841 | 61890729 |
XM_022664112.1 | False | 3759 | mRNA | 0.49 | 17 | 61831841 | 61887888 |
XM_022664115.1 | False | 4622 | mRNA | 0.50 | 19 | 61831841 | 61890727 |
XM_022664119.1 | False | 3651 | mRNA | 0.48 | 18 | 61831841 | 61887888 |
XM_022664124.1 | False | 3585 | mRNA | 0.48 | 17 | 61831841 | 61887888 |
XM_022664131.1 | False | 3579 | mRNA | 0.48 | 16 | 61831841 | 61887888 |
XM_022664137.1 | False | 4429 | mRNA | 0.50 | 18 | 61831841 | 61890714 |
XM_022664143.1 | False | 4401 | mRNA | 0.50 | 17 | 61831841 | 61890713 |
XM_022664149.1 | False | 4344 | mRNA | 0.50 | 16 | 61831841 | 61890701 |
XM_022664157.1 | False | 4594 | mRNA | 0.50 | 18 | 61831841 | 61890726 |
XM_022664164.1 | False | 4383 | mRNA | 0.50 | 17 | 61831841 | 61890713 |
XR_002649101.1 | False | 2279 | misc_RNA | 0.54 | 19 | 61833448 | 61887888 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC103042845 | daam1b,LOC108412077,LOC107755211,LOC108257948,LOC107701451 | coding | downstream | 16255 | 61707691 ~ 61815586 (-) |
nudt14 | nudt14,LOC107683965,LOC107755236,LOC107718404,LOC107701483 | coding | downstream | 401562 | 61369995 ~ 61430279 (-) |
LOC103028984 | LOC108412120 | coding | downstream | 630618 | 61169502 ~ 61201223 (-) |
btbd6 | btbd6,btbd6b,LOC107755235,LOC107718408,LOC107589075,LOC107701487,LOC107560384 | coding | downstream | 1095990 | 60731202 ~ 60735851 (-) |
xrcc3 | xrcc3 | coding | downstream | 1129588 | 60697286 ~ 60702253 (-) |
LOC103031530 | NA | coding | upstream | 105624 | 61996353 ~ 62008626 (-) |
LOC103031849 | kctd1,LOC108414594,LOC103031849,LOC108442723,LOC106599692,LOC107723550,LOC107561046,LOC107684804,LOC107746021,LOC107701518 | coding | upstream | 119078 | 62009807 ~ 62039839 (-) |
LOC103030167 | LOC108414838,LOC107684806,LOC107723431 | coding | upstream | 155962 | 62046691 ~ 62057863 (-) |
LOC111191939 | NA | coding | upstream | 322431 | 62213160 ~ 62214666 (-) |
LOC103030680 | cdh2,LOC108416271,LOC108258170,LOC107561048,LOC107746014,LOC107701519,LOC107571545 | coding | upstream | 410418 | 62301147 ~ 62362260 (-) |
G29937 | NA | non-coding | downstream | 448007 | 61367275 ~ 61383834 (-) |
G29930 | NA | non-coding | downstream | 503723 | 61307103 ~ 61328118 (-) |
G29819 | NA | non-coding | downstream | 938790 | 60892696 ~ 60893051 (-) |
G29803 | NA | non-coding | downstream | 1038050 | 60792776 ~ 60793791 (-) |
G29741 | NA | non-coding | downstream | 1306457 | 60520240 ~ 60525384 (-) |
G30001 | NA | non-coding | upstream | 17974 | 61908703 ~ 61917427 (-) |
G30011 | NA | non-coding | upstream | 46001 | 61936730 ~ 61937164 (-) |
G30014 | NA | non-coding | upstream | 59688 | 61950417 ~ 61979462 (-) |
G30017 | NA | non-coding | upstream | 71021 | 61961750 ~ 61966803 (-) |
G30020 | NA | non-coding | upstream | 79820 | 61970549 ~ 61973807 (-) |
LOC103029720 | jag2,jag2b,LOC107718403,LOC107755239 | other | downstream | 466963 | 61292876 ~ 61364878 (-) |
LOC111191938 | NA | other | downstream | 1462227 | 60369046 ~ 60369614 (-) |
LOC103035785 | ppm1a,LOC108434987,LOC108258036 | other | downstream | 1467097 | 60351272 ~ 60364744 (-) |
LOC103034188 | LOC108434976 | other | downstream | 1669775 | 60149397 ~ 60162066 (-) |
snx17 | snx17 | other | downstream | 2278931 | 59506926 ~ 59552910 (-) |
fryl | fryl,LOC107683942,LOC107665346 | other | upstream | 1246222 | 63136951 ~ 63288108 (-) |
G30376 | NA | other | upstream | 1439315 | 63330044 ~ 63334846 (-) |
usp46 | usp46 | other | upstream | 1543063 | 63433792 ~ 63485021 (-) |
scfd2 | scfd2 | other | upstream | 1637552 | 63528281 ~ 63763673 (-) |
LOC103036530 | cyp2p7,cyp2j20,LOC108415355 | other | upstream | 2883955 | 64774684 ~ 64799176 (-) |