LOC103030220 (rpgrip1,LOC107664673,LOC107742250,LOC107550023)


Basic Information

Item Value
gene id LOC103030220
gene name rpgrip1,LOC107664673,LOC107742250,LOC107550023
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 8844498 ~ 8868718 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239768.3
aaaaaatgacaacatTTATGAAATTAGGAACAGAGAATCAATTTGATGACACTCAATACCACAATTTTTGTTGAATACAAATGGAAGAAGATATCTGAGATAAAAGGAGGAGgtgctgagaaagagagagagagagctaagcAGATTAGATTAGGATCAATGAATCCACATCTTTCTCTagagagaggggaaagagaTTTACCCTCCTGCCTTAAACTGAAGAACTGAGGAAAGAATGATATCACTCAGCTGAAAGTACAGGAAAGATGGAATCAGATGAATAGAAGGACCGATCTTTTACAAAGATGAGGAATAGGACAGACAAGAAGAAAGATAGAAGGATTAACAGAGACTATGTGACTGTCAGTCAGGCAGATGAACAAGAACAAGGCAACTTTCGCCACCAGAAGTTCAGTGTCAACCTTCTGCAGTAAATAAATAGGCAAACACAACAGTTGAAATGTCACTGACGATGGACGAAACAGCGGGGGACCTACCAGTAAGGGATGTGGGCCTCAGAGGAGGAGCCATGATTGTCACACAAGAACAAGAAACAAGGTCCTGGAAAAGACCTGCACAGGTCTTAAGCCTTAAAGAAAGGCAGCGTGTGTTCAAGGTACCGCGAGAGCATCTGGAGGAGCAGTGTCTACGCCTGCAGGAAGAAAACACACTGCTCAAACAACACACCCGTATACAAGAACAGAAACTACGCAGGTTGTCCACTAAGCTACTAAGGCTGAGGTATGGGCACCCTGGCTCAGCTGGGGGACGGGAGGCTGACACAGAGGACACGATTCAGGAGCTGGAGACTCGTGTGGCCACTCTGGAGGGTCAGAAAGAGGCGCTGCAGGGCAAACTCAGTGTGGCCAGACAGCAGATTCTGAGTCTGACTGGACGACCTCACCATAGACCCCGCACAGCACGAGGTGTAGAAGTGGATGGAGGGGTCAGACGGGCGGCTCAGACAGCTCCTGCCCGCTATGCCCACAGCTCCCTGGAGGACACCAGAGAAGAGATTGAGAAATTACATGCATTACTCAGCAGGTCTAGTGTTCTGGAAACCCAGAATATGAGGGTAACAGAGCTTGAGCTGGCTGCTCAGTCCCTCAGAGACACTcttaaagagaaggagagagaaattGAAGACACAGTGAAAGAGTTGCGCAGACAACAAGTCGATGGACACAGACTCAGcataaaagaaaatgtagaTGTGATCAGACTGCAGAAGCAACTTTCTGAGAAGAGTACAGCCCTTCTGGTTCTTCAGGAGAAGTTTACCAGTCTGCAGGAGGCTTATGAGGCCAAGCTGGAGGAGGATCAGAAGTCACTGCGAGAGAGTCAGGGGGCCTTGCTGGGAAAGGTTGAAGAGCTGAGTGAACAGCTGAAAGAGGAAAAGCAGAGAGTGCTGATGCTGGAAGGTCAGCTCAGTACCGCTGCTCTATCACTGCAGAGCCTGCAAGAGCTTCAGGAGAAGGTTACAGACCTCGAAGGAGAGAGGAACCTTTTGAAGAAAGGATATGATACTCTTCTGGAGAGCACTTTGTCTGCCCAAAGCCATCAAGAAGAACACGaggacaaagaaagagagcggGAGCGAAGGAGAGAGGAGAAGCGGAGAGCTGAACTCCAGAGACTTGAGGAGATACTGGaacaggagaggagagagagggacgaTCTCGAAATAGCAAAAGACAGGATGAGACGAGAGCATGAAAGGACTCtggaagagagagaacaggagaaGGCTCTGGCCACTGAACTCAGAGAAAAACATGTCTCTATGGAGCAGGAAGTTCTACAGCACAAGCAGGAGGCAGCATCTCTGCAAGAAAAACTGAGCAGAGTAACACAAGAGTTTGATATGAGTGTGGAGGACCTTAGTGAAACTCTGATGCAGATTAAGGCTTTTAGACTGCAGCTGAAGAGTCAGGAGGGCCTGCGTTTTTTGGTGACTGAGGAGAAGATGATGGACTCATCTCAAGAGCTTTCAGCTCTACAGGCCTCACACGCAGAAACCGTAGTAGAGCTTCATAAAACCCAACACCTGCTGTTAATGCAGCATCGGCTCTGCAATGACCTGCAGGCAGAGTTAAAACTGGAGCTGGAGAGAGCTGAAATGGAAAGACAGGAAAATAGAAAGTGGGCCACTGAAAAAGACAAGTTGTTGAAAAGCAGAGCTCTTCAAATCAACAGCTTACAAGGTCAGCTTAAAGATTTTGCCTACAGTCCTAGGAACTACAATCGAGCCATACCCCAGCAGTACACGTGGACAGGGGTGGAGCAGGAGGTCATGCAGCCAATGGAGGAAAACACCAGCATCACTCTGCTACGAGAGGGAGAGTCTCTGCTCGAAATTCATCTCCTGGGAGCCACATTTACTCCTGTGGGACTGAGAACCATGAAACAGGACAGAGCTGGGGACACCAGGGGGCAGCAGGAAGTTGTAACATTCTGCACCTATGCATTCCTAGACTTTGAGATGCACTCAACACCACTGATTTCAGGCTCTCAGCCTAATTATGGCTTCACGTCCTCCTACACCCTTTCTGCCCATGATCTCACCAAGCTCGGAGGTCAGGGAGCGTCTGTGCATGCTGAACTACACCAGGCTCTGGGAGGGGTGCAATTCATAACCAGGGGCAGAGCGAGGATTCCCCTGGAGGGGGTGCTGCAGCGCAGAGGAGAACAAATAAAAGGAAGAGCTAACCTGACAGGTTCTGAGGGGGAGATATTAGGGGTCCTGGAATTCTGGGTACGTCTACATCCTCAAATCGAGCCAAAAGAGGCTCACAAAGACAGAGCCACAGACAGAACAGCTGAGAGATGGGCCACACACAAACCTATGGACTGGAGTCACATACAGCCAGAGACTCAGGAGATATTTGACTATGGTGGAGGGATACCGAATGAGCTGGAAGTGGTACTGGAACGCTGTGTGGGTCTCAGCTCACGCTGGCCAGGACTTCTCCCAGATTCTTATTTAACTTATCGTCTTTATGATCTGCCACCACACTCCACTCCCACAGTACTGTGCTGTGAAGACCCCGTGTTCTCAGACTCTACCACCTACCCACTAGCAGTTACAGCAGATCTGATGGAATACCTGAAGGTGGGCAGCCTCTGGGTTTATGTATTTGACGACAGTGAAGGCCGGGCTCCCCAAACTTACCTGGCCAAGACTCCAGTCCCACTCCAGCCCCTGGCAGCTGGAAGACCAATTAAAGGTGATTATGTCCTGAGGGACCCTGCAGGGGCACCTAGAGGTACAGTGAGGGTACATCTTCAGTGGAGGTATCCTTTCCAAACGCCAGAAGCTCCATCTAGACCAAGTGGAAAGGAGAGAAGAGTGAGGGAAGAAGAAAGGCTGGGAAAAACTGAACACAGGACTGAAGTGTCACACAGGCCTATTGCTAAACCCAGGTTAAAAACAGCACAACAGAAACTGAGCCCTCGGAAAGATGACAGAGaccaaTTTGTACCACATCCTCCACCAATCAAAATACACAGACCTGATAGCTCACCTGCTCAAAGCGTTCGCGCAAAGCCTCTCAGTAAGGTTCGACCCAAGACCACCAGGTCACCTGATTCTGACCGTACTACAGATCTGCGATCACCTGTCTCAACAACAAGCAGCTATCAAAGAAGATCAGCAAGCGATACGAGTGTACAAGATGTAATAGAAGTAGAAGAggtagaggaagaggaagaggagcagcAGTCTGCAAGTGCAAGAGTTCTAGAGGACAGTGATATCCCTGAGTCTGAGGAATCGAGTGGCAGTGATGTAATCATAATCCCTCAACCACCAAAACCTATCAAAAAGggTGACAGACTCAGAGTGGAGATCTTATCCCTCTTATTTGACCCTTCCTCCAGTGTTGCCCTGGACCAGTCAGTGCAGCAAGTCTATGTAGAATATCGACTCTTAGGCATTCCTATGGAGACCACCGAGACCCCCATGTCTCTGCGGAAACCAACAAAGGGAGAGGAAGTACATTACAACTTCTCCAGAGTCATACACGTGGACTCCATGGAGGCGGCTCCTCTGAGGCACTACCTTTACACTATGCTGGAAGGCACTGATCCCAACAGTGGCAGGTTAAAGTTCACTGTGGTCAGTGAGCCACTGAACGATGAAGATGAGTGTGAGGATGTTGGCCAAGCCTATCTGGATCTCCAGGAACTTCTGCTTACAGGAAATGATGTAGTTGAAAAGCAAATCGACATCATCAGTATGGATGAAGAGCAGGAGCTGGTGGGGAAGCTGCGAGTGTCTCTGGAAGCGGCTCAGGCTTTAACAGGAATCTACTGGGAGTATCATGACcagaaagagaagaaggaggTAACAGAGGAAACAGAGGACACAGAggaaaatgaagaagaagaggaggcaAGAGAAGAGCCTATGAAGAAAGGCAAGAAGAAGCAAGTGGCTGATTTAGATGTTGATGATGACTCTTTCTAAAGGAAAGATATAAAtggagtatttatttaaatgtaaatgtaaataaaaatctcAGGCTGCTGTAATGCTAAGAAAATTGTTTTCTGCTGTATGCTTCTCTGCTTATACTGATGCAATGTGCATCATTCATGTACAGTGTTACTGGAGTTtggaattaaatacaaaaatgacaAA
>XM_022680035.1
aaaaaatgacaacatTTATGAAATTAGGAACAGAGAATCAATTTGATGACACTCAATACCACAATTTTTGTTGAATACAAATGGAAGAAGATATCTGAGATAAAAGGAGGAGgtgctgagaaagagagagagagagctaagcAGATTAGATTAGGATCAATGAATCCACATCTTTCTCTagagagaggggaaagagaTTTACCCTCCTGCCTTAAACTGAAGAACTGAGGAAAGAATGATATCACTCAGCTGAAAGTACAGGAAAGATGGAATCAGATGAATAGAAGGACCGATCTTTTACAAAGATGAGGAATAGGACAGACAAGAAGAAAGATAGAAGGATTAACAGAGACTATGTGACTGTCAGTCAGGCAGATGAACAAGAACAAGGCAACTTTCGCCACCAGAAGTTCAGTGTCAACCTTCTGCAGTAAATAAATAGGCAAACACAACAGTTGAAATGTCACTGACGATGGACGAAACAGCGGGGGACCTACCAGTAAGGGATGTGGGCCTCAGAGGAGGAGCCATGATTGTCACACAAGAACAAGAAACAAGGTCCTGGAAAAGACCTGCACAGGTCTTAAGCCTTAAAGAAAGGCAGCGTGTGTTCAAGGTACCGCGAGAGCATCTGGAGGAGCAGTGTCTACGCCTGCAGGAAGAAAACACACTGCTCAAACAACACACCCGTATACAAGAACAGAAACTACGCAGGTTGTCCACTAAGCTACTAAGGCTGAGGTATGGGCACCCTGGCTCAGCTGGGGGACGGGAGGCTGACACAGAGGACACGATTCAGGAGCTGGAGACTCGTGTGGCCACTCTGGAGGGTCAGAAAGAGGCGCTGCAGGGCAAACTCAGTGTGGCCAGACAGCAGATTCTGAGTCTGACTGGACGACCTCACCATAGACCCCGCACAGCACGAGGTGTAGAAGTGGATGGAGGGGTCAGACGGGCGGCTCAGACAGCTCCTGCCCGCTATGCCCACAGCTCCCTGGAGGACACCAGAGAAGAGATTGAGAAATTACATGCATTACTCAGGTCTAGTGTTCTGGAAACCCAGAATATGAGGGTAACAGAGCTTGAGCTGGCTGCTCAGTCCCTCAGAGACACTcttaaagagaaggagagagaaattGAAGACACAGTGAAAGAGTTGCGCAGACAACAAGTCGATGGACACAGACTCAGcataaaagaaaatgtagaTGTGATCAGACTGCAGAAGCAACTTTCTGAGAAGAGTACAGCCCTTCTGGTTCTTCAGGAGAAGTTTACCAGTCTGCAGGAGGCTTATGAGGCCAAGCTGGAGGAGGATCAGAAGTCACTGCGAGAGAGTCAGGGGGCCTTGCTGGGAAAGGTTGAAGAGCTGAGTGAACAGCTGAAAGAGGAAAAGCAGAGAGTGCTGATGCTGGAAGGTCAGCTCAGTACCGCTGCTCTATCACTGCAGAGCCTGCAAGAGCTTCAGGAGAAGGTTACAGACCTCGAAGGAGAGAGGAACCTTTTGAAGAAAGGATATGATACTCTTCTGGAGAGCACTTTGTCTGCCCAAAGCCATCAAGAAGAACACGaggacaaagaaagagagcggGAGCGAAGGAGAGAGGAGAAGCGGAGAGCTGAACTCCAGAGACTTGAGGAGATACTGGaacaggagaggagagagagggacgaTCTCGAAATAGCAAAAGACAGGATGAGACGAGAGCATGAAAGGACTCtggaagagagagaacaggagaaGGCTCTGGCCACTGAACTCAGAGAAAAACATGTCTCTATGGAGCAGGAAGTTCTACAGCACAAGCAGGAGGCAGCATCTCTGCAAGAAAAACTGAGCAGAGTAACACAAGAGTTTGATATGAGTGTGGAGGACCTTAGTGAAACTCTGATGCAGATTAAGGCTTTTAGACTGCAGCTGAAGAGTCAGGAGGGCCTGCGTTTTTTGGTGACTGAGGAGAAGATGATGGACTCATCTCAAGAGCTTTCAGCTCTACAGGCCTCACACGCAGAAACCGTAGTAGAGCTTCATAAAACCCAACACCTGCTGTTAATGCAGCATCGGCTCTGCAATGACCTGCAGGCAGAGTTAAAACTGGAGCTGGAGAGAGCTGAAATGGAAAGACAGGAAAATAGAAAGTGGGCCACTGAAAAAGACAAGTTGTTGAAAAGCAGAGCTCTTCAAATCAACAGCTTACAAGGTCAGCTTAAAGATTTTGCCTACAGTCCTAGGAACTACAATCGAGCCATACCCCAGCAGTACACGTGGACAGGGGTGGAGCAGGAGGTCATGCAGCCAATGGAGGAAAACACCAGCATCACTCTGCTACGAGAGGGAGAGTCTCTGCTCGAAATTCATCTCCTGGGAGCCACATTTACTCCTGTGGGACTGAGAACCATGAAACAGGACAGAGCTGGGGACACCAGGGGGCAGCAGGAAGTTGTAACATTCTGCACCTATGCATTCCTAGACTTTGAGATGCACTCAACACCACTGATTTCAGGCTCTCAGCCTAATTATGGCTTCACGTCCTCCTACACCCTTTCTGCCCATGATCTCACCAAGCTCGGAGGTCAGGGAGCGTCTGTGCATGCTGAACTACACCAGGCTCTGGGAGGGGTGCAATTCATAACCAGGGGCAGAGCGAGGATTCCCCTGGAGGGGGTGCTGCAGCGCAGAGGAGAACAAATAAAAGGAAGAGCTAACCTGACAGGTTCTGAGGGGGAGATATTAGGGGTCCTGGAATTCTGGGTACGTCTACATCCTCAAATCGAGCCAAAAGAGGCTCACAAAGACAGAGCCACAGACAGAACAGCTGAGAGATGGGCCACACACAAACCTATGGACTGGAGTCACATACAGCCAGAGACTCAGGAGATATTTGACTATGGTGGAGGGATACCGAATGAGCTGGAAGTGGTACTGGAACGCTGTGTGGGTCTCAGCTCACGCTGGCCAGGACTTCTCCCAGATTCTTATTTAACTTATCGTCTTTATGATCTGCCACCACACTCCACTCCCACAGTACTGTGCTGTGAAGACCCCGTGTTCTCAGACTCTACCACCTACCCACTAGCAGTTACAGCAGATCTGATGGAATACCTGAAGGTGGGCAGCCTCTGGGTTTATGTATTTGACGACAGTGAAGGCCGGGCTCCCCAAACTTACCTGGCCAAGACTCCAGTCCCACTCCAGCCCCTGGCAGCTGGAAGACCAATTAAAGGTGATTATGTCCTGAGGGACCCTGCAGGGGCACCTAGAGGTACAGTGAGGGTACATCTTCAGTGGAGGTATCCTTTCCAAACGCCAGAAGCTCCATCTAGACCAAGTGGAAAGGAGAGAAGAGTGAGGGAAGAAGAAAGGCTGGGAAAAACTGAACACAGGACTGAAGTGTCACACAGGCCTATTGCTAAACCCAGGTTAAAAACAGCACAACAGAAACTGAGCCCTCGGAAAGATGACAGAGaccaaTTTGTACCACATCCTCCACCAATCAAAATACACAGACCTGATAGCTCACCTGCTCAAAGCGTTCGCGCAAAGCCTCTCAGTAAGGTTCGACCCAAGACCACCAGGTCACCTGATTCTGACCGTACTACAGATCTGCGATCACCTGTCTCAACAACAAGCAGCTATCAAAGAAGATCAGCAAGCGATACGAGTGTACAAGATGTAATAGAAGTAGAAGAggtagaggaagaggaagaggagcagcAGTCTGCAAGTGCAAGAGTTCTAGAGGACAGTGATATCCCTGAGTCTGAGGAATCGAGTGGCAGTGATGTAATCATAATCCCTCAACCACCAAAACCTATCAAAAAGggTGACAGACTCAGAGTGGAGATCTTATCCCTCTTATTTGACCCTTCCTCCAGTGTTGCCCTGGACCAGTCAGTGCAGCAAGTCTATGTAGAATATCGACTCTTAGGCATTCCTATGGAGACCACCGAGACCCCCATGTCTCTGCGGAAACCAACAAAGGGAGAGGAAGTACATTACAACTTCTCCAGAGTCATACACGTGGACTCCATGGAGGCGGCTCCTCTGAGGCACTACCTTTACACTATGCTGGAAGGCACTGATCCCAACAGTGGCAGGTTAAAGTTCACTGTGGTCAGTGAGCCACTGAACGATGAAGATGAGTGTGAGGATGTTGGCCAAGCCTATCTGGATCTCCAGGAACTTCTGCTTACAGGAAATGATGTAGTTGAAAAGCAAATCGACATCATCAGTATGGATGAAGAGCAGGAGCTGGTGGGGAAGCTGCGAGTGTCTCTGGAAGCGGCTCAGGCTTTAACAGGAATCTACTGGGAGTATCATGACcagaaagagaagaaggaggTAACAGAGGAAACAGAGGACACAGAggaaaatgaagaagaagaggaggcaAGAGAAGAGCCTATGAAGAAAGGCAAGAAGAAGCAAGTGGCTGATTTAGATGTTGATGATGACTCTTTCTAAAGGAAAGATATAAAtggagtatttatttaaatgtaaatgtaaataaaaatctcAGGCTGCTGTAATGCTAAGAAAATTGTTTTCTGCTGTATGCTTCTCTGCTTATACTGATGCAATGTGCATCATTCATGTACAGTGTTACTGGAGTTtggaattaaatacaaaaatgacaAA
>XM_022680040.1
aaaaaatgacaacatTTATGAAATTAGGAACAGAGAATCAATTTGATGACACTCAATACCACAATTTTTGTTGAATACAAATGGAAGAAGATATCTGAGATAAAAGGAGGAGgtgctgagaaagagagagagagagctaagcAGATTAGATTAGGATCAATGAATCCACATCTTTCTCTagagagaggggaaagagaTTTACCCTCCTGCCTTAAACTGAAGAACTGAGGAAAGAATGATATCACTCAGCTGAAAGTACAGGAAAGATGGAATCAGATGAATAGAAGGACCGATCTTTTACAAAGATGAGGAATAGGACAGACAAGAAGAAAGATAGAAGGATTAACAGAGACTATGTGACTGTCAGTCAGGCAGATGAACAAGAACAAGGCAACTTTCGCCACCAGAAGTTCAGTGTCAACCTTCTGCAGTAAATAAATAGGCAAACACAACAGTTGAAATGTCACTGACGATGGACGAAACAGCGGGGGACCTACCAGTAAGGGATGTGGGCCTCAGAGGAGGAGCCATGATTGTCACACAAGAACAAGAAACAAGGTCCTGGAAAAGACCTGCACAGGTCTTAAGCCTTAAAGAAAGGCAGCGTGTGTTCAAGGTACCGCGAGAGCATCTGGAGGAGCAGTGTCTACGCCTGCAGGAAGAAAACACACTGCTCAAACAACACACCCGTATACAAGAACAGAAACTACGCAGGTTGTCCACTAAGCTACTAAGGCTGAGGTATGGGCACCCTGGCTCAGCTGGGGGACGGGAGGCTGACACAGAGGACACGATTCAGGAGCTGGAGACTCGTGTGGCCACTCTGGAGGGTCAGAAAGAGGCGCTGCAGGGCAAACTCAGTGTGGCCAGACAGCAGATTCTGAGTCTGACTGGACGACCTCACCATAGACCCCGCACAGCACGAGGTGTAGAAGTGGATGGAGGGGTCAGACGGGCGGCTCAGACAGCTCCTGCCCGCTATGCCCACAGCTCCCTGGAGGACACCAGAGAAGAGATTGAGAAATTCAGGTCTAGTGTTCTGGAAACCCAGAATATGAGGGTAACAGAGCTTGAGCTGGCTGCTCAGTCCCTCAGAGACACTcttaaagagaaggagagagaaattGAAGACACAGTGAAAGAGTTGCGCAGACAACAAGTCGATGGACACAGACTCAGcataaaagaaaatgtagaTGTGATCAGACTGCAGAAGCAACTTTCTGAGAAGAGTACAGCCCTTCTGGTTCTTCAGGAGAAGTTTACCAGTCTGCAGGAGGCTTATGAGGCCAAGCTGGAGGAGGATCAGAAGTCACTGCGAGAGAGTCAGGGGGCCTTGCTGGGAAAGGTTGAAGAGCTGAGTGAACAGCTGAAAGAGGAAAAGCAGAGAGTGCTGATGCTGGAAGGTCAGCTCAGTACCGCTGCTCTATCACTGCAGAGCCTGCAAGAGCTTCAGGAGAAGGTTACAGACCTCGAAGGAGAGAGGAACCTTTTGAAGAAAGGATATGATACTCTTCTGGAGAGCACTTTGTCTGCCCAAAGCCATCAAGAAGAACACGaggacaaagaaagagagcggGAGCGAAGGAGAGAGGAGAAGCGGAGAGCTGAACTCCAGAGACTTGAGGAGATACTGGaacaggagaggagagagagggacgaTCTCGAAATAGCAAAAGACAGGATGAGACGAGAGCATGAAAGGACTCtggaagagagagaacaggagaaGGCTCTGGCCACTGAACTCAGAGAAAAACATGTCTCTATGGAGCAGGAAGTTCTACAGCACAAGCAGGAGGCAGCATCTCTGCAAGAAAAACTGAGCAGAGTAACACAAGAGTTTGATATGAGTGTGGAGGACCTTAGTGAAACTCTGATGCAGATTAAGGCTTTTAGACTGCAGCTGAAGAGTCAGGAGGGCCTGCGTTTTTTGGTGACTGAGGAGAAGATGATGGACTCATCTCAAGAGCTTTCAGCTCTACAGGCCTCACACGCAGAAACCGTAGTAGAGCTTCATAAAACCCAACACCTGCTGTTAATGCAGCATCGGCTCTGCAATGACCTGCAGGCAGAGTTAAAACTGGAGCTGGAGAGAGCTGAAATGGAAAGACAGGAAAATAGAAAGTGGGCCACTGAAAAAGACAAGTTGTTGAAAAGCAGAGCTCTTCAAATCAACAGCTTACAAGGTCAGCTTAAAGATTTTGCCTACAGTCCTAGGAACTACAATCGAGCCATACCCCAGCAGTACACGTGGACAGGGGTGGAGCAGGAGGTCATGCAGCCAATGGAGGAAAACACCAGCATCACTCTGCTACGAGAGGGAGAGTCTCTGCTCGAAATTCATCTCCTGGGAGCCACATTTACTCCTGTGGGACTGAGAACCATGAAACAGGACAGAGCTGGGGACACCAGGGGGCAGCAGGAAGTTGTAACATTCTGCACCTATGCATTCCTAGACTTTGAGATGCACTCAACACCACTGATTTCAGGCTCTCAGCCTAATTATGGCTTCACGTCCTCCTACACCCTTTCTGCCCATGATCTCACCAAGCTCGGAGGTCAGGGAGCGTCTGTGCATGCTGAACTACACCAGGCTCTGGGAGGGGTGCAATTCATAACCAGGGGCAGAGCGAGGATTCCCCTGGAGGGGGTGCTGCAGCGCAGAGGAGAACAAATAAAAGGAAGAGCTAACCTGACAGGTTCTGAGGGGGAGATATTAGGGGTCCTGGAATTCTGGGTACGTCTACATCCTCAAATCGAGCCAAAAGAGGCTCACAAAGACAGAGCCACAGACAGAACAGCTGAGAGATGGGCCACACACAAACCTATGGACTGGAGTCACATACAGCCAGAGACTCAGGAGATATTTGACTATGGTGGAGGGATACCGAATGAGCTGGAAGTGGTACTGGAACGCTGTGTGGGTCTCAGCTCACGCTGGCCAGGACTTCTCCCAGATTCTTATTTAACTTATCGTCTTTATGATCTGCCACCACACTCCACTCCCACAGTACTGTGCTGTGAAGACCCCGTGTTCTCAGACTCTACCACCTACCCACTAGCAGTTACAGCAGATCTGATGGAATACCTGAAGGTGGGCAGCCTCTGGGTTTATGTATTTGACGACAGTGAAGGCCGGGCTCCCCAAACTTACCTGGCCAAGACTCCAGTCCCACTCCAGCCCCTGGCAGCTGGAAGACCAATTAAAGGTGATTATGTCCTGAGGGACCCTGCAGGGGCACCTAGAGGTACAGTGAGGGTACATCTTCAGTGGAGGTATCCTTTCCAAACGCCAGAAGCTCCATCTAGACCAAGTGGAAAGGAGAGAAGAGTGAGGGAAGAAGAAAGGCTGGGAAAAACTGAACACAGGACTGAAGTGTCACACAGGCCTATTGCTAAACCCAGGTTAAAAACAGCACAACAGAAACTGAGCCCTCGGAAAGATGACAGAGaccaaTTTGTACCACATCCTCCACCAATCAAAATACACAGACCTGATAGCTCACCTGCTCAAAGCGTTCGCGCAAAGCCTCTCAGTAAGGTTCGACCCAAGACCACCAGGTCACCTGATTCTGACCGTACTACAGATCTGCGATCACCTGTCTCAACAACAAGCAGCTATCAAAGAAGATCAGCAAGCGATACGAGTGTACAAGATGTAATAGAAGTAGAAGAggtagaggaagaggaagaggagcagcAGTCTGCAAGTGCAAGAGTTCTAGAGGACAGTGATATCCCTGAGTCTGAGGAATCGAGTGGCAGTGATGTAATCATAATCCCTCAACCACCAAAACCTATCAAAAAGggTGACAGACTCAGAGTGGAGATCTTATCCCTCTTATTTGACCCTTCCTCCAGTGTTGCCCTGGACCAGTCAGTGCAGCAAGTCTATGTAGAATATCGACTCTTAGGCATTCCTATGGAGACCACCGAGACCCCCATGTCTCTGCGGAAACCAACAAAGGGAGAGGAAGTACATTACAACTTCTCCAGAGTCATACACGTGGACTCCATGGAGGCGGCTCCTCTGAGGCACTACCTTTACACTATGCTGGAAGGCACTGATCCCAACAGTGGCAGGTTAAAGTTCACTGTGGTCAGTGAGCCACTGAACGATGAAGATGAGTGTGAGGATGTTGGCCAAGCCTATCTGGATCTCCAGGAACTTCTGCTTACAGGAAATGATGTAGTTGAAAAGCAAATCGACATCATCAGTATGGATGAAGAGCAGGAGCTGGTGGGGAAGCTGCGAGTGTCTCTGGAAGCGGCTCAGGCTTTAACAGGAATCTACTGGGAGTATCATGACcagaaagagaagaaggaggTAACAGAGGAAACAGAGGACACAGAggaaaatgaagaagaagaggaggcaAGAGAAGAGCCTATGAAGAAAGGCAAGAAGAAGCAAGTGGCTGATTTAGATGTTGATGATGACTCTTTCTAAAGGAAAGATATAAAtggagtatttatttaaatgtaaatgtaaataaaaatctcAGGCTGCTGTAATGCTAAGAAAATTGTTTTCTGCTGTATGCTTCTCTGCTTATACTGATGCAATGTGCATCATTCATGTACAGTGTTACTGGAGTTtggaattaaatacaaaaatgacaAA

Function

symbol description
rpgrip1 Acts upstream of or within photoreceptor cell outer segment organization and retinal rod cell development. Predicted to be located in cilium. Predicted to be active in photoreceptor connecting cilium. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 6; Leber hereditary optic neuropathy; cone-rod dystrophy 13; and retinitis pigmentosa. Orthologous to human RPGRIP1 (RPGR interacting protein 1).

NR:

description
PREDICTED: protein fantom-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239768.3 True 4642 mRNA 0.48 29 8844498 8868718
XM_022680035.1 False 4639 mRNA 0.48 29 8844498 8868718
XM_022680040.1 False 4627 mRNA 0.48 28 8844498 8868718

Neighbor

gene id symbol gene type direction distance location
LOC103031465 NA coding upstream 1616 8834542 ~ 8842882 (+)
LOC103029568 ptrfb,LOC103029568,LOC108426559,LOC108256430,LOC107550021 coding upstream 33005 8782431 ~ 8811493 (+)
LOC111191756 NA coding upstream 106232 8733715 ~ 8738266 (+)
LOC103037430 NA coding upstream 124023 8675628 ~ 8720475 (+)
LOC103039953 NA coding upstream 133204 8703321 ~ 8711294 (+)
LOC103030535 NA coding downstream 10867 8879585 ~ 8889395 (+)
LOC111191975 NA coding downstream 31507 8900225 ~ 8902254 (+)
LOC111191981 NA coding downstream 35363 8904081 ~ 8921731 (+)
LOC103021367 NA coding downstream 63966 8932684 ~ 8974038 (+)
LOC103046631 zgc:101569,LOC107678482,LOC107730011,LOC107557244 coding downstream 112286 8981004 ~ 9005830 (+)
G17433 LOC102796188,LOC108256678,LOC101465343,LOC103355494,LOC100690057 non-coding upstream 70735 8771847 ~ 8773763 (+)
G17421 NA non-coding upstream 94864 8746869 ~ 8749634 (+)
LOC111194833 NA non-coding upstream 127701 8715728 ~ 8716797 (+)
G17417 NA non-coding upstream 154464 8668990 ~ 8690034 (+)
G17403 NA non-coding upstream 207645 8636622 ~ 8636853 (+)
G17442 LOC108426561,LOC103358366,LOC104935909 non-coding downstream 4214 8872932 ~ 8877126 (+)
LOC111194870 NA non-coding downstream 59974 8928692 ~ 8931760 (+)
LOC111194882 NA non-coding downstream 204776 9073494 ~ 9074499 (+)
G17474 txndc5,LOC107730007,LOC107557239,LOC107678545 non-coding downstream 213370 9082088 ~ 9084442 (+)
G17496 NA non-coding downstream 334671 9203389 ~ 9215506 (+)
G17414 NA other upstream 127711 8675619 ~ 8716787 (+)
LOC103041197 NA other upstream 659661 8168839 ~ 8184837 (+)
LOC103032995 NA other upstream 1415107 7422571 ~ 7429391 (+)
G16820 NA other upstream 2311630 6532396 ~ 6532868 (+)
LOC103025913 NA other upstream 2666614 6168760 ~ 6177884 (+)
LOC111191971 NA other downstream 22526 8891244 ~ 8899645 (+)
LOC111191978 NA other downstream 31222 8899940 ~ 8904004 (+)
G17443 NA other downstream 47868 8916586 ~ 8950159 (+)
G17745 NA other downstream 1412506 10281224 ~ 10281976 (+)
G17904 abr other downstream 2309190 11177908 ~ 11190080 (+)

Expression


Co-expression Network