btg4 (btg4)


Basic Information

Item Value
gene id btg4
gene name btg4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 1664596 ~ 1669346 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245239.3
AGTGACCGTTGACCTCTTTAAAAAGCAGCTCCCTGCTGTGTTCTGAATACTGAAAACATGCCTGCTCCTGCTCTCTGTTTTTGAGCTTGTTTCTGCCAGTTTTGATCAGTTTTTAAGAGCaaatttgtttgcttgtttggaagatcttgtttttattctagtttttagacttttagatTGGAAAGAAGTGAGCAGTAGtttttgttagtgtgtgtgaaaCTCTGAAacttaaagtaaaaatgaaagaagaaaTTGCAGCCACAGTTTTCTTTGTTGTGAGACTGGCGAAGAAACATGGAAGACTTGATCGCTCACGCAGAGAGAAGTTTGCGGTAGCTTTTACGTCTGTTCTGTTCGAGAACTACAAAGGCCACTGGTACCCTGAGAACCCGTGCAAAGGACAGGGTTTTAGGTGTTTGAGGACCAACAGATCCCAGGTTAGACACCCAATAATTGATGGTGCTTGCAAACGGAGTGGTATCAACTATGAAGACCTGGGTTTACCAAAGGAGATCACCATTTGGGTAGATCCAGGAGAGGTGTCCTGCCGGTATGGTGAGAAGAACACGCCGTTCTGTGTGACTCTTCTTGAAGGGGAGAAGGGAGACAGTGAGTTCTCACGCAGGATTAACAACGCTGTGGAACGGGCTACCTCAGACTATCACTCTGGAACCTCCTCTGATGAGGAGAGCTGCAACAGCAGCATGatcagcagtagcagcagcagcaccacactCTCAGCTCCAGAGCCGAAGTGCATCCCAACCGTGTCCAACCCAAACAGTGTCTACCAGTTCAGTGAGTTTGCGCCCCCTGCACCCATCCAGTCCTGGGCTCCCTATCCCAAAAGGAAGCCCTATAATGGAAATGGTTACCAGCAGCATTCGAATGGACCGTACCCTCCTCCACACAACGGCTTCAAAAATTACAGGCCCTCCTATGCTTTCTCTGGTCCGCGGGTGGACAAATACCATTGGGTCAGCAAGAATCGCTCCTAGAGACGGGTCCTTCACGCCCCCTCTCCCCCCGTCCCTGTCCCTACTTGTTTCTGTGCAGGCATGTGACCATGGCttaatttaagtgtttaagaAACTTTATTTATGAGAATCTATTGAGGTATTGCCTTACAGGCATTTTaatatttgctgttttaataaattatgcaataaatcaaatgtaattaagtctaaata

Function

symbol description
btg4 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in ovary. Orthologous to human BTG4 (BTG anti-proliferation factor 4).

NR:

description
maternal B9.15 protein-like

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245239.3 True 1193 mRNA 0.46 4 1664596 1669346

Neighbor

gene id symbol gene type direction distance location
LOC103032850 ppp2r1a,LOC103032850,LOC108428700,LOC108260120,LOC107691746,LOC107745127,LOC107603174,LOC107663771 coding upstream 85098 1559849 ~ 1579498 (+)
alg9 alg9,LOC107691744 coding upstream 114839 1534029 ~ 1549757 (+)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203 coding upstream 164051 1497708 ~ 1500545 (+)
LOC103029064 LOC103029064,LOC108428730 coding upstream 194707 1457470 ~ 1469889 (+)
cryab cryab,LOC108259721 coding upstream 222487 1437806 ~ 1442109 (+)
LOC103036563 hepacam coding downstream 518040 2187386 ~ 2203190 (+)
ccdc15 ccdc15 coding downstream 540299 2209645 ~ 2220704 (+)
slc37a2 slc37a2,LOC107691751 coding downstream 554690 2224036 ~ 2240887 (+)
LOC103037703 LOC108427349,LOC108259736,LOC107664292,LOC107556423,LOC107600796,LOC107712935,LOC571737,LOC107744331 coding downstream 575115 2244461 ~ 2259339 (+)
LOC103038019 LOC108428643 coding downstream 612410 2281756 ~ 2295500 (+)
G15818 NA non-coding upstream 28345 1586778 ~ 1636251 (+)
G15831 NA non-coding upstream 40219 1623926 ~ 1624377 (+)
G15813 NA non-coding upstream 82650 1581513 ~ 1581946 (+)
G15771 NA non-coding upstream 207168 1454327 ~ 1457428 (+)
G15749 NA non-coding upstream 243788 1415182 ~ 1420808 (+)
G15845 NA non-coding downstream 60484 1729830 ~ 1730349 (+)
G15890 NA non-coding downstream 159438 1828784 ~ 1829016 (+)
G15892 NA non-coding downstream 161195 1830541 ~ 1830742 (+)
G15920 NA non-coding downstream 325079 1994425 ~ 1994863 (+)
G15932 NA non-coding downstream 404193 2073539 ~ 2073838 (+)
fdxacb1 fdxacb1 other upstream 135179 1516497 ~ 1529417 (+)
LOC103025578 NA other upstream 323796 1322516 ~ 1340800 (+)
LOC103031762 gnb2,LOC108428986,LOC107663406,LOC105023919 other upstream 1543415 70784 ~ 121181 (+)
G15839 NA other downstream 11813 1681159 ~ 1682022 (+)
nrgn NA other downstream 481284 2150630 ~ 2171207 (+)
LOC103038305 NA other downstream 2846651 4515997 ~ 4517309 (+)
LOC103025913 NA other downstream 4499414 6168760 ~ 6177884 (+)
G16820 NA other downstream 4863050 6532396 ~ 6532868 (+)

Expression


Co-expression Network