LOC103025777 (mep1a)


Basic Information

Item Value
gene id LOC103025777
gene name mep1a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 72833413 ~ 72847814 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245386.3
TTCAATCTCTATACCTTTATTGGCATGTTGATGCTGCCAGTGCGACACAAGCGCTCATCCTCTGCAGTTGACATGGATATCTCATGGAAAATCTTTTTCTTGGGTGTTCTGCTCACATTAAAGggACAAGCTCTCCCTGCAGATTATGGTGGAGATGCTGATGCTGGGGAATTGCGGGAGGACATTCTTGAAATAAATTTAGAATCCCAGAGAGATTTGTTTGAGGGAGACATTGCTGTGGACCCAAGAAGGAATGCTATTGTGGATGAAAAAGCAAGGTGGAAGTTTCCCATCCCCTATATACTGACTGATAGTTTagATCTTAATGCAAAAGGTGTAATCCTTCAAGCGTTTGAAGTTTACCGCCTGAAGTCCTGTGTGGACTTTAAGCCCTATGAAGGAGAGAGTACCTACATTTCTTTTACCAAGCTGGACGGGTGCTGGTCATTTGTTGGAGATTTACATACAGGGCAGAATGTCTCTATTGGAGAAAGATGTGACACAAAAGCCATAGTAGAGCATGAGCTGCTCCATGCTCTGGGCTTCTACCACGAGCAGTCACGCTCAGACAGGGACGACTATGTTAAAATCTGGTGGGACCAAATCATTTCAGGAAAGGAGCACAACTTCAACAAATACACTGATGACTTCATCACCGATCTGAACACACCATATGATTATGAGTCTATCATGCACTACAGGCCTTTATCTTTTAATAAAGAGCCCGACATTCCCACCATCACCACAGCTATTCCTGCCTTTAATGAGATCATTGGACAACGTCTTGATTTCAGCGCCATTGATCTGGAGAGGCTGAACCGCATGTATGACTGTGCTGAGACTCATACACTGCTGGACCAGTGTGCCTTTGAGCAGATCAACATCTGTGGGATGATCCAGAATGAGAATGATGATGACGACTGGGTGCAAACTTTGAGCTCCACGGACATAAATGATCACACTCTAGGAGGACAATGCAGAGatgctggCTATTTTATGAAATTTGATACTGCTAACAAAGAGGTTGGACACAGTGCTATTCTGGAGTCTCGCATTCTATACCCTAAGAGGGGCTACCAATGTCTGCAGTTCTTCTACAGGATTATTGGAGGTCCGGGTGATATGCTGGTGATTTGGCTCAGAATGGATGATGGCACTGGCACTGTGCGCAAACCCAGGAAAGTGCACACTATTCATGGTGATGATAACAGCTCATGGAAGATCGCCCACGTGACTCTGAACACCGAAGACAAATTCCGCTACTTTTTTCAGGGCACTGTGACTTCAAAAAAGGCATTTGGTGGAATTCTCATTGATGACATCATTCTGTCTGAGACCACCTGCCCAAGTGGTGTCTGGATGGTCCAGAACTTTACCGGATTGCTTCTGAGCACCGCACACGGCACAAGCGTCCGCAGTGATTGTTTCTACAACTCTGAGGGCTACGGCTATGGCATTGATGTGTATCCTAATGGCAGAATTAATGCGTCTGCAGACTATGTGGGAGTAACTTTTCACTTGTGCAGTGGTGAGGATGATGCAGTATTAGAATGGCCAGCTATTAACAGGCAGGCTACCATTACTATAATGGATCAGGATCCAGATGCGACCCTCCAGATGTCCAACAGCAGAAGCTTCACCACTGATGAATCTGAATTGTGGAATAAGCCGTCTATATTTGGGACATGGGATGACACCTGCAATTGCTTCAGAGGACCCGAGTTTGGCTGGAGCACCTTTATCTCCCATCAGCAGCTCAAGAGAAGAAGCTTCTTGAAGAACGATGACTTAATCGTTACTGTTAATTTTGATGACTTGACTCATCTCATCAAATCAGAGGTTCCTGTCCAAAATGAAGCCTCTTATGAGTCTCCAGCTATAGACAAAAGCGTACCGCTGGGGCCAAAAGTTCGAGAAGCCCGTGCTCTCAGTGACCCCTGTGAGCCTAACCCCTGCAGCAACGGAGGAGTGTGCATCAATAGCAAAGGCAAAGCTTCATGCAGGTGCCCCTCAGGACAGATGACTGTGTTCTCAGGGGAAGCATGTGAGAAACAGCACATTAGTGGAGAAGTGCTGGGGGTTCTGTTTGGTGGTGCTGCAGGCACTGTGGCTCTCGCTGCTGCCATTATAGCAACCATCCGCAGACAACACCGCAGTTCATTATGAATACTTCTAACatcaacaatatatttttaatataaacgcAATCAGAATATGCTGATGTATTCATGATGCATTTGTACAGATACCTAATCATCAAGgtatttcagttaaaaatagACTTGTCCTTCAATGAATTCAGTCTCTGTAGAGGGAAGACAGAAGTTTATTTGTTGATTcagaaatgtttataatttataacaaaaaaagctttcaaTAAACAGCTCAGTTATCTTCTATTGACTTCTATTTGTCCCACACTGAAAAACAGGtacaaacataaagtaattTGCTATACAAAGAAAAACTGATATAGTAGACATATGTACTACACAGTCTATCTAGTAATaggaaaataaactttttacattatattaacaataaaatgacTGCAGTCAAACCGGTATCAGAAGAACAAATGATAAAAGAGAAGCAGGGCTACTATCTAGCTAACATGGGTGCCATAGCATTATAACAGTGTGATACtttctaaatatatacaatatcaGCTTCTGTTGATATATACATGATGCATTGTTAATTCACCTAATCTAAATGCTGCTGAAGGCATTAAAAGAATTTCATCAAACATGGCTTCATATCAACAAATGCAAGATACATTATTTCTTAGTGCAGCATTAATGAGTTCTGATATTttcaaaattacaataaattattggctattcagtttttatatttttgtgactttacaaatatttaatatacacagtgccttgcaaaagtattggaattCCTTTAAAGTCATTAGAATATTCTGGATTACAAATGACTTGTAATGTAAAACTAATGTGAGACTGAAGTATTTATTTCCTtcacatatttttaatattgccCTAATGAGAATTCACATTGGCCTAAAtcattaaaaaggtaaaatgtttaaagtaaGACCAAATATAATTTTAAGGCAATTAGACATAGAGCTAAACACATAcctcagtgttttgttttgtattactGTTTTCTAAGAAGCTGATTTGTGTCAAcactataaaaacacatttgatttgatttagatCAAATGTTTTAGATATCCCATTGAGCAATATTGAGTCAATAGTAAAGAAAAGGGAAATTGTATCATACCTTACAGGAACTGCCTAAACAAGATTATTCCCTAAATCCAAATGGTTTGTAATACAATACTGGCTGGAACAatttgtgtaagtgttatttaTCATCCAGTCATGGTGTAATGACTTTTAGGggcatgaatacttttgcaagctcATGTGTTTAACATATTTACAGTGTTCTCTCTGTCCATCTCTGTTTGTTCATAAATGTGAACGGGGTGAAGTAGCgttattcttctttacaaaaggCTTATTAACCTGTGAGCACCCCGTGTCTGTTCTCCAGTGCACTGCTGTGACTTCCTGTTCCTCAGTGAGTTGGTTTTAAACCCCTGTAATTTAAGAGAACAGTGAGGAGAGAGGAGCCATTTGGGGTGTATTACAATTTCCTGTTAGCGTTCTAAAATTcttaaaacacaataatagAAATTAGACACAACTCAGTTGTTTTCACAAACCTTTAGGGGTGCATCATTTTTTCGCAGTGGAAACTGTCAGGTTCTTCTTGCTTTCACTTTTGGCTGACCTCTAAAGATACAGAAATACACAGAATATTGAAATGCTGAAAGGGTAGAATAAGTGATTTTTAAAGTGAGCTATTCATGCTTCACCCACAAAGGAACTGTTTTTAGGACGGACAAGCTTTACAATGATGTCAGAATCCTACAGCTATAGCTATGAGCGCTATGTTGTTATTTGACATATTTCAATGCAATATAAactggaataaaaataaa

Function

symbol description
mep1a Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Located in extracellular exosome. Part of meprin A complex.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: meprin A subunit alpha

GO:

id name namespace
GO:0045766 positive regulation of angiogenesis biological_process
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01395 MEP1A; meprin A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245386.3 True 3994 mRNA 0.40 14 72833413 72847814

Neighbor

gene id symbol gene type direction distance location
LOC103025272 LOC108440976 coding upstream 1798 72823559 ~ 72831615 (+)
LOC103024428 LOC103024428,LOC108440977 coding upstream 11136 72815642 ~ 72822277 (+)
tdrd6 NA coding upstream 29624 72786996 ~ 72803789 (+)
LOC103023468 vsnl1a,LOC103023468,LOC103379314,LOC107378186,LOC102798040,LOC104929407,LOC107553484 coding upstream 56356 72743018 ~ 72777057 (+)
LOC111191362 LOC108416099,LOC107559745,LOC107712833,LOC108248366 coding upstream 154330 72654819 ~ 72679083 (+)
opn5 opn5 coding downstream 371712 73219526 ~ 73247185 (+)
LOC103034574 ptgs2b,LOC108442416,LOC107732418,LOC107698381,LOC107553505,LOC107726413,LOC107696154,LOC107599092 coding downstream 967156 73814970 ~ 73820823 (+)
pdc pdcb,pdc,LOC108442415,LOC106560557,LOC108257608,LOC107553454 coding downstream 1031852 73879666 ~ 73884428 (+)
LOC103035930 tpr coding downstream 1060048 73907862 ~ 73931368 (+)
scyl3 scyl3,LOC104956565 coding downstream 1098264 73946078 ~ 73954704 (+)
G32716 NA non-coding upstream 131607 72701522 ~ 72701806 (+)
G32713 NA non-coding upstream 135648 72697449 ~ 72697765 (+)
G32644 NA non-coding upstream 206728 72626396 ~ 72626685 (+)
G32630 NA non-coding upstream 237735 72565009 ~ 72595678 (+)
G32579 NA non-coding upstream 470072 72362951 ~ 72363341 (+)
LOC111191374 NA non-coding downstream 29230 72877044 ~ 72877730 (+)
G32787 NA non-coding downstream 97000 72944814 ~ 72945464 (+)
G32793 NA non-coding downstream 133198 72981012 ~ 72984863 (+)
G32778 NA non-coding downstream 199188 73047002 ~ 73079574 (+)
G32806 NA non-coding downstream 213891 73061705 ~ 73062665 (+)
sf3b6 SF3B6,sf3b6,pm14 other upstream 47050 72781793 ~ 72786363 (+)
G32641 NA other upstream 236476 72595906 ~ 72596937 (+)
usp24 usp24 other upstream 336349 72403534 ~ 72497064 (+)
dab1 dab1,LOC107581465 other upstream 853050 71463100 ~ 71980363 (+)
G32229 NA other upstream 1663857 71167524 ~ 71169556 (+)
cd2ap cd2ap other downstream 296836 73144650 ~ 73196220 (+)
LOC103030552 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC107095392,LOC106527994,LOC108248696,LOC108440801,LOC106571455 other downstream 591242 73439056 ~ 73506987 (+)
selp NA other downstream 1140687 73988501 ~ 74016347 (+)

Expression


Co-expression Network