G58591


Basic Information

Item Value
gene id G58591
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14548250 ~ 14582261 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66731
TTATAATTCATAATGCATTCAATACTGAAAAGTAGTTAAACATTGATTATTTTACCCAGTACTTGTGTACAATATATTTTATGCTTCCTGCTTATGTAGAGTTTTTCAATTCAGTCATTGGTTTGGATGGATGGATGGATGGATGGATGGCAATTCATTCAAAACTAAAAAATCCTGATTCTCCAGTGAGAAAGATTTTTCGTCTTAAGCAGTGAAAAGATTGCTTTAGGACTGATTCTGTGAAATCCAACTGTTAAGTAAGCAAGAAGTTTGAAACTAGCTTGACCTGACCCAAGCAACTAATTAATTAATTCTTATAAAAGAGGCTATCTCGGGTCACTCATTATGTTTGTGAATTCAGATTCCCATTGAAAAACAATGGCGCAAACCAGCATTTGAACAACTTCCAGCTTGGCACAGCAACTTGCCCAAAAGTTTAATCAAGTCCGTCAAAGTGTAAATGCTGCAAATGAATACCCTCGGTTCAGAGTGATTTCAGTTAAACAGTTTGCAAACACATGCTCTTGAAGTGCGACGTAGCGTGTCAGAACAGGCCTGCCACTAAGGTGGCGCACAGGCCTGGCCAGCAATTACCAAAATGAAAGTTCACCGCGAGGGTCATGCCTACTTGAAGCTGTCGTGGCACGGACGTTTTCTCCCATTAGCCACTGCTGACATTTTCACCTGCTCACATACTCCAACAAAGACCTCTCGATCCCTCTCTTGCCCTAATTGTGCTCTGACGCTTGATCCTTGCTTCGTTTGTGACCTTGTGTCAAAACGTACATGGCCCAAAAACGAGAGCACGCAAAGTTCATTAGGAACAATGCAGGCCTGGCCACTGTAAGGTGGACTCAATAGTCATTTAGAACAGAATCTCAAGCACCCTTTGCCATCTCCTGACACTAACAAAAGCTATAAATGAACCTGTCAAAGTGTTCAAATCATGCACACAGATTTGCCTTGGGTGTTGAGGGGCATGTTTTTCCAGCCATTAAAAAGAATATAGAATATTGCAAAAAAGTTTTTTTTCTTACCCCATTTAATATCCCAAGTATTTAAGCATAAACTTAATTTTTTGTAAACATTTATGCTTAAAACAGGAAAAAATTTAAATGGGTTAAGAAAATTAAACTAAACTCTCTCTCTATATATATCTGGGTAACACTTACATCAAATGTTATACAATATAATATTAGTTAAAGTGCCGCTATTATGGATTTTTAAAAAAGTACCTTTCACGCAGTGTGTAATGTACAGTCAAACCAAAAATTATTCAGACATTTTTTATATTTTTGATATATTTTTACTAGTGGGTACAGGTATAGTTCAATTATGTAAGTGAGGATAGCAAAATAAAGTAAACTGTGACATATTATACCCAAAAATTCTTCATACAGTGGACTACCAGTAAAACTGATACAAATTTGGAACCAAAAATTATTCAGACACTTTGACCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66731 True 1463 lncRNA 0.37 2 14548250 14582261

Neighbor

gene id symbol gene type direction distance location
CI01000009_14474300_14474593 NA coding upstream 73480 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 96708 14432716 ~ 14451542 (+)
CI01000009_14380226_14386430 ASB1 coding upstream 161384 14380226 ~ 14386866 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding upstream 172567 14348389 ~ 14375683 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding upstream 233901 14296451 ~ 14314349 (+)
CI01000009_14595691_14611767 NA coding downstream 13175 14595436 ~ 14612569 (+)
CI01000009_14616605_14620028 NA coding downstream 33110 14615371 ~ 14620238 (+)
CI01000009_14659692_14664324 NA coding downstream 76918 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 99393 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 275452 14857713 ~ 14859636 (+)
G58558 NA non-coding upstream 48004 14496936 ~ 14501514 (+)
G58454 NA non-coding upstream 144668 14402649 ~ 14403582 (+)
G58447 NA non-coding upstream 145860 14393814 ~ 14402390 (+)
G58456 NA non-coding upstream 148899 14304940 ~ 14399351 (+)
G58613 NA non-coding downstream 2795 14585056 ~ 14585281 (+)
G58614 NA non-coding downstream 3054 14585315 ~ 14585606 (+)
G58615 NA non-coding downstream 3429 14585690 ~ 14585910 (+)
G58616 NA non-coding downstream 3860 14586121 ~ 14586586 (+)
G58618 NA non-coding downstream 7430 14589691 ~ 14590156 (+)
G58455 NA other upstream 289724 14246695 ~ 14258526 (+)
G58382 NA other upstream 508349 14039757 ~ 14039901 (+)
G58028 NA other upstream 1404642 13140378 ~ 13143608 (+)
G57701 NA other upstream 1525112 13006643 ~ 13023138 (+)
G58649 NA other downstream 67463 14649724 ~ 14652022 (+)
G58711 NA other downstream 184398 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 342968 14924621 ~ 14952571 (+)
G60028 NA other downstream 769786 15352047 ~ 15376169 (+)

Expression


Co-expression Network