ppil6 (ppil6)


Basic Information

Item Value
gene id ppil6
gene name ppil6
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73749986 ~ 73755516 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245412.3
GGCTGTGAGGCGGTTGCTAAGCAACCCCACGCTCAGCCTGCTGGTGGTGGCGGTGAAGGTGTGGAGAAATGGCTCCTGAGGTCCGTGTGGAGATCACTGGGCTGATGAAAGTTCATCGCTTTCAGGTCGCTAAAAGCATCGCAGAGGGCTTAAAACAAAAATTCCCAGATTCATTTTTTGAGCCCACCATTTGTCCACTGCTTGAGCTTGACTGGAATATGTATCTAGCAGATAAAAAGCAGGAGCTGAAAGGGGAGATGTTGCAGTACAGAGGGAGTGTGGTGTGTTTCGTGAATGGTCAGTTTATCGGGGATGAAAAAGATCTGTCCAGGTGGGCAGAGAAACAGTGGCTGTTCACTTTCTACCGCCCCCCGGCACTTTATGCTGCCATTACTGACGAATACTACCAGCAGCACCTGCTCAACACTGGGCATGTATTTGTGTACATGGATGTTGAGATTGGAGGGGAAGCAGCTGGTCGATTACTGTTTGAGctctTCTCAGACCTGTGTCCAAAGACATGTAAAAACTTTAAAGCCCTGTGTACTGGAGAGGCAGGCATGTCCCAGAACCAGCTCATGCTCAGCTACAAGAACTCCCTGTTCCACAGAGTGGTGCCTAATGGCTGGTTGCAAGGAGGAGatattacTCCCGCTGGGAAAGGCAATGGTGGAGAATCCATTTATGGTGCAACTTTTGGAGATGAGGGTTTTGCTGTATCTCACAACAAGCGAGGGATCTTGGGAATGGCCAACCAAGGACCCCACAGTAACGGTTCCCAGTTCTACATCACCCTACAGCCAGCCCTATGGATGGATACAAATTATGTGGCTTTTGGGCAAGTTGTTGAAGGCACAGATGTTCTTAGGAAACTAGAGGAAGTGCCCACTTACAATGAAAGACCAAAACAGGACTGCAGAATAGTTGCATGTGGGTTGTTTAATCCTTGACTGTTTATGTTCATTGGTAGGAGTGATTTTTGTAGGTAGTCTACAAATGTGGAACTTTAGAACTTCTAATCAAAATGAATTACAAGGAGTAGACATTTTCCGTTTCTGTGAAATTGCCTTAGGCAAATAAAATCATAACACCTTTCCCATAAACATTCCTAtgcaaaggtttgggcacccctgttgAAATCATCTGTTTTGTTAAACAAGTTGAGAATATGTTAAATTCTCGTACATGTTGATGCAcagttactgtttttattacctCTTGTAACAGTGTCTCATATGTATAAGTTATGACACAATTGAAATattatgttgtgtgttttttttttgcaagatgTCAGCagttatatattaaaagtttCTTATTTTGTCTGAAA
>XM_022666348.1
GGGCTGTGAGGCGGTTGCTAAGCAACCCCACGCTCAGCCTGCTGGTGGTGGCGGTGAAGGTGTGGAGAAATGGCTCCTGAGGTCCGTGTGGAGATCACTGGGCTGATGAAAGTTCATCGCTTTCAGGTCGCTAAAAGCATCGCAGAGGTAATGACTCGCTCTGACGCctataagGGCTTAAAACAAAAATTCCCAGATTCATTTTTTGAGCCCACCATTTGTCCACTGCTTGAGCTTGACTGGAATATGTATCTAGCAGATAAAAAGCAGGAGCTGAAAGGGGAGATGTTGCAGTACAGAGGGAGTGTGGTGTGTTTCGTGAATGGTCAGTTTATCGGGGATGAAAAAGATCTGTCCAGGTGGGCAGAGAAACAGTGGCTGTTCACTTTCTACCGCCCCCCGGCACTTTATGCTGCCATTACTGACGAATACTACCAGCAGCACCTGCTCAACACTGGGCATGTATTTGTGTACATGGATGTTGAGATTGGAGGGGAAGCAGCTGGTCGATTACTGTTTGAGctctTCTCAGACCTGTGTCCAAAGACATGTAAAAACTTTAAAGCCCTGTGTACTGGAGAGGCAGGCATGTCCCAGAACCAGCTCATGCTCAGCTACAAGAACTCCCTGTTCCACAGAGTGGTGCCTAATGGCTGGTTGCAAGGAGGAGatattacTCCCGCTGGGAAAGGCAATGGTGGAGAATCCATTTATGGTGCAACTTTTGGAGATGAGGGTTTTGCTGTATCTCACAACAAGCGAGGGATCTTGGGAATGGCCAACCAAGGACCCCACAGTAACGGTTCCCAGTTCTACATCACCCTACAGCCAGCCCTATGGATGGATACAAATTATGTGGCTTTTGGGCAAGTTGTTGAAGGCACAGATGTTCTTAGGAAACTAGAGGAAGTGCCCACTTACAATGAAAGACCAAAACAGGACTGCAGAATAGTTGCATGTGGGTTGTTTAATCCTTGACTGTTTATGTTCATTGGTAGGAGTGATTTTTGTAGGTAGTCTACAAATGTGGAACTTTAGAACTTCTAATCAAAATGAATTACAAGGAGTAGACATTTTCCGTTTCTGTGAAATTGCCTTAGGCAAATAAAATCATAACACCTTTCCCATAAACATTCCTAtgcaaaggtttgggcacccctgttgAAATCATCTGTTTTGTTAAACAAGTTGAGAATATGTTAAATTCTCGTACATGTTGATGCAcagttactgtttttattacctCTTGTAACAGTGTCTCATATGTATAAGTTATGACACAATTGAAATattatgttgtgtgttttttttttgcaagatgTCAGCagttatatattaaaagtttCTTATTTTGTCTGAAA

Function

symbol description
ppil6 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human PPIL6 (peptidylprolyl isomerase like 6).

NR:

description
peptidyl-prolyl cis-trans isomerase-like 6 isoform X1

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K12739 PPIL6; peptidyl-prolyl cis-trans isomerase-like 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245412.3 False 1333 mRNA 0.44 8 73749986 73755515
XM_022666348.1 True 1361 mRNA 0.44 8 73749986 73755516

Neighbor

gene id symbol gene type direction distance location
enah enah coding downstream 2076 73647169 ~ 73747910 (-)
LOC103032852 lbr coding downstream 110562 73630251 ~ 73639424 (-)
LOC103031805 LOC103031805,LOC105892805 coding downstream 140778 73604327 ~ 73609208 (-)
spats1 spats1 coding downstream 313772 73429168 ~ 73436214 (-)
ptchd4 ptchd4,LOC107553442,LOC107732383,LOC107732542,LOC107690039,LOC107601530 coding downstream 447960 73271560 ~ 73302026 (-)
LOC103034242 pla2g4a,LOC108442417,LOC108257972,LOC106560559 coding upstream 28491 73784007 ~ 73813141 (-)
LOC103035214 NA coding upstream 175881 73931397 ~ 73939674 (-)
c3h1orf112 cunh1orf112 coding upstream 200295 73955811 ~ 73970935 (-)
LOC103037051 si:dkey-51e6.1,LOC103037051,LOC108442414,LOC107555634,LOC107726439,LOC107696171,LOC105907105,LOC108257519 coding upstream 221675 73977191 ~ 73979734 (-)
LOC103031184 LOC108443214 coding upstream 270089 74025605 ~ 74043117 (-)
G32937 NA non-coding downstream 213882 73533661 ~ 73536104 (-)
LOC111191385 NA non-coding downstream 421832 73326367 ~ 73328154 (-)
G32900 NA non-coding downstream 424619 73319644 ~ 73325367 (-)
G32891 NA non-coding downstream 486433 73262330 ~ 73263553 (-)
G32879 NA non-coding downstream 531835 73217900 ~ 73218151 (-)
G33076 LOC108442415,LOC108257608,LOC106560557,LOC107726497,LOC107696164 non-coding upstream 127377 73882893 ~ 73884914 (-)
G33091 NA non-coding upstream 195396 73950912 ~ 73953542 (-)
G33099 NA non-coding upstream 236226 73991742 ~ 73992572 (-)
G32946 NA other downstream 197103 73552415 ~ 73552883 (-)
G32914 NA other downstream 361374 73387862 ~ 73388612 (-)
LOC103029909 LOC108412949 other downstream 716200 72921906 ~ 73033786 (-)
LOC103026087 NA other downstream 830689 72869708 ~ 72919297 (-)
pla2g7 pla2g7,LOC108440964,LOC107553425,LOC107696191 other downstream 936456 72803993 ~ 72813530 (-)
ak9 ak9 other upstream 1392 73756908 ~ 73778866 (-)
LOC111191425 NA other upstream 40947 73796463 ~ 73868538 (-)

Expression


Co-expression Network