LOC103028959


Basic Information

Item Value
gene id LOC103028959
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44311254 ~ 44317837 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245489.3
GTTGACATATGGTTTGTGATTGTTGTTGCTTTGACCATGGTATTGTGGTGGTGTCCAATGCAGGGAGGGGGTTAGAAGCTCACAGTTCAGTTCTCAGCATGCTTAGTGGTCACCATTAGCTTTGTTGGGGTTATATGGATGACTTGAGTTGTTTGTGGTGAGgttatgtgtttattattgttaGCTGAGTTTAGTTGTAGACCATAATGTTGTGGTGGAGGGTGAATAAGGGTCTCCACCAGTAATCTGCCATTTTATGCTAGAACCAGGGTGCTCTTGATCTGAAGTGAATTCCACAGACAGATAGTGACGTATTACACAACAGAGTGACGGGAGTGGTGAGTTATGTCTCTGATTCTGAGGACAGGTAAGTATGCAAGATCAACAGACAAGTTCGGCTGGTGACATTCACAGTTGAGCTATTCCTGATGTCTCTGAGGCCACAGTCCTTCCAAGGCCTGGATGGGAAGCAATGGCTGCTGGCCTGGGCTGGATGTCAGATCCCTCTTCCTCTTTAGAGATAACTGTTATCTCCATCCTCTTCGTTGCTGTCTGtatcacactgtacacactttgCACCAGCTGTTACAGCTATCCACCTAAGGCTCCACACTATGCAGCAGAGAAAGAAATTCCATCATCTTTCGCAACCAATGAAAAACCAGAAGATCATTGGAGCACAAACAGAACCTCGGGCAATGAGCATGTTCCTGATAGGCCACATACCAGGAGTTACACCATGGTGCAGCCACAGCTATCCACAGTATATTCTCACAACAGAGCTGAATCACATGGATACTTTAGCCAGGGAATGATACCGCAGCTTTCAGATGCACCAGTCTTCTCAGGTAGCCCTTCAGGGTCAGTGAATCTGGACTCCTCATTGTTCCTATCAACGTTTCGTGATTCTGGACTTTTGGAGGAACTAACCATGCAGTTTCCATCCCTACAACAGCCCATAACAGTCTTGAAAGACCATGAAACACAAGACACAGAAGATCAAACAAATGTCAAGTCTTCTCCATGGTTGGAGCCTAGTAAGGAACATCTATATGAAAGCATTGGAATTGGACGTGTCAGTGAGCCCAGTTCCAGCCACCAAGCTCCTGAAGACCAGCAGAGTGAGAATAGTGAGGACCCCTATGAAACAGTGAGAGATCCCAGGGACCCTGCTGCAGGTCATGTGTGCAAATCTTCTGCTGTAATGGACAACAAAGTGACCGATAATCCAGGACAGATTTTTCAGCCTTTCCCAGCAAGGCAAGACAGTAAAGGTTTGGTTGGTTCTGAAATAACGGACGTCTACGCAGCAGTGAACTTCAAAAAGAAAAGCCTGAAAATCAAAGAACTCCCCGTTTCATCAGACACCATAGCGCAGGCTGAGGATGACATAGATGAGGAGCCAGCACCTCCTGTCCCAGAAAAAATGTTTGAAACGGACTGTCTCTAACTTATATGATGTTTGATATCATGTCTCATGCACTTTATCAAAAAAAGTTAAAGGGCTAATATTATGTAATCATTGtgtaaactaataaaaagaaTGATTATCATCATTACAGTCca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245489.3 True 1566 mRNA 0.45 6 44311254 44317837

Neighbor

gene id symbol gene type direction distance location
LOC103040630 znf395 coding downstream 2556 44298947 ~ 44308698 (-)
LOC103039281 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107726431,LOC107698369 coding downstream 48061 44256451 ~ 44263193 (-)
slc25a24 slc25a24,LOC108439838,LOC107553450,LOC107732372,LOC107698372,LOC107696157,LOC107726490 coding downstream 92249 44202119 ~ 44219005 (-)
kifap3 kifap3,LOC107726482,LOC107732413 coding downstream 329890 43946979 ~ 43981364 (-)
LOC103035417 NA coding downstream 595056 43709728 ~ 43716198 (-)
LOC103041948 LOC108439850 coding upstream 3866 44321703 ~ 44324457 (-)
LOC103042571 stmn4,LOC108439832,LOC108257558 coding upstream 42262 44360099 ~ 44367840 (-)
LOC103028241 runx2b,runx2,LOC103028241,LOC108410521,LOC108258149,LOC107678859,LOC107726745 coding upstream 208049 44525886 ~ 44575275 (-)
mut mut,LOC107726757,LOC107697172,LOC107726528 coding upstream 419330 44737167 ~ 44760205 (-)
LOC103027014 mfsd2b,si:dkeyp-115a10.3,LOC107750078,LOC107697177 coding upstream 490989 44808826 ~ 44851093 (-)
G26084 elp3,LOC107732362,LOC107698368,LOC107553498,LOC107696156,LOC107599080 non-coding downstream 86981 44221013 ~ 44224273 (-)
G26083 NA non-coding downstream 112776 44195249 ~ 44198478 (-)
G26038 NA non-coding downstream 254955 44054940 ~ 44056299 (-)
G26032 NA non-coding downstream 273417 44037302 ~ 44037837 (-)
G26031 NA non-coding downstream 275497 44035527 ~ 44035757 (-)
G26154 NA non-coding upstream 59486 44377323 ~ 44377527 (-)
G26158 cdc42bpb,LOC106607646 non-coding upstream 123824 44441661 ~ 44444962 (-)
LOC111197214 NA non-coding upstream 296373 44614210 ~ 44615581 (-)
G26238 NA non-coding upstream 365351 44683188 ~ 44688822 (-)
G26240 NA non-coding upstream 380574 44698411 ~ 44698915 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 411494 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 632392 43675025 ~ 43678862 (-)
LOC103027084 LOC108416115,LOC103358919 other downstream 794097 43495419 ~ 43517157 (-)
G25785 NA other downstream 1199853 43098822 ~ 43111401 (-)
G25678 NA other downstream 1592865 42717666 ~ 42718389 (-)
fkbp1b fkbp1b other upstream 451427 44769264 ~ 44799505 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 538262 44856099 ~ 44870690 (-)
G26295 atad2b,LOC107697175,LOC107603081 other upstream 564941 44882778 ~ 44885801 (-)
G26388 NA other upstream 1118272 45436109 ~ 45437585 (-)
G26588 NA other upstream 1617316 45935153 ~ 45935622 (-)

Expression


Co-expression Network