G58620


Basic Information

Item Value
gene id G58620
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14592653 ~ 14592886 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66760
CTAGAACACTATAGCAACTGCATGGCAATATTCTAACAAACACTCAGAATACCTTAGCAACAGCAAAGCAACGTCCTGGTAACATCCCACAACACCCTGGGGTGAGTTTAGCAAAAGGCAATCAGAACTCATTTTTTCTTCAGATAATGTAAAAATCTAGTTTGACCTGAATGAGAACATGTCGGAGGCCATGACGCCAACACATCTTCACTACAAACTGATTCCAGAGATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66760 True 234 lncRNA 0.41 1 14592653 14592886

Neighbor

gene id symbol gene type direction distance location
CI01000009_14581261_14582899 NA coding upstream 9659 14580880 ~ 14582994 (+)
CI01000009_14474300_14474593 NA coding upstream 117883 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 141111 14432716 ~ 14451542 (+)
CI01000009_14380226_14386430 ASB1 coding upstream 205787 14380226 ~ 14386866 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding upstream 216970 14348389 ~ 14375683 (+)
CI01000009_14595691_14611767 NA coding downstream 2550 14595436 ~ 14612569 (+)
CI01000009_14616605_14620028 NA coding downstream 22485 14615371 ~ 14620238 (+)
CI01000009_14659692_14664324 NA coding downstream 66293 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 88768 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 264827 14857713 ~ 14859636 (+)
G58619 NA non-coding upstream 1975 14590301 ~ 14590678 (+)
G58618 NA non-coding upstream 2497 14589691 ~ 14590156 (+)
G58616 NA non-coding upstream 6067 14586121 ~ 14586586 (+)
G58615 NA non-coding upstream 6743 14585690 ~ 14585910 (+)
G58614 NA non-coding upstream 7047 14585315 ~ 14585606 (+)
G58621 NA non-coding downstream 4199 14597085 ~ 14597411 (+)
G58622 NA non-coding downstream 4703 14597589 ~ 14597902 (+)
G58623 NA non-coding downstream 5381 14598267 ~ 14598482 (+)
G58630 NA non-coding downstream 14200 14607086 ~ 14608066 (+)
G58558 NA other upstream 91139 14496936 ~ 14501514 (+)
G58455 NA other upstream 334127 14246695 ~ 14258526 (+)
G58382 NA other upstream 552752 14039757 ~ 14039901 (+)
G58028 NA other upstream 1449045 13140378 ~ 13143608 (+)
G57701 NA other upstream 1569515 13006643 ~ 13023138 (+)
G58649 NA other downstream 56838 14649724 ~ 14652022 (+)
G58711 NA other downstream 173773 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 332343 14924621 ~ 14952571 (+)
G60028 NA other downstream 759161 15352047 ~ 15376169 (+)

Expression


Co-expression Network