G58630


Basic Information

Item Value
gene id G58630
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14607086 ~ 14608066 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66770
CAATCAAATATACTTAAAGACCCCCTGTGGTAAAAATCAAGTTTTTAATGTCTATGCGGTAATATGCTTTAAGACAAACCATGTGCAAATTCATAAGTCAACACCATTGCTGAGTATTTTCTCCTTAAAACTGCAGTGAACCAAAGATAGTCTCAAAAACGCGTTTTGAAATCGCTGGTGTCTGTGACGTCAAAAACTACCTTGAAACCAATCACGTCAACGTGTGATCGTCAATGAGTGGATCTCTGATATTTGCATAATCTTAGAACCATGAATATTAAATGAAGCAAGGGTGTAGAGTTACATTCTAGCTATTTTAAGGCATGAAGATTTTTTTTTTCAACGAAAAAACATTTAAATATGTAATTTTGGTGATCAAAAATGAGTTTTAAGGGATAAAATGATTGACTACAGGGTGACTTAAAAATAAAAATCTATGTTTACACACACATACACATATATATGTATTTATTTATTTTAAAGTCAGATAAAAAGAGAGGGAAAAATCAGACAGCAGGAGTGAATAAGGTAGGGCATTACATCCATTAGCATACGGCTCACGCCCATTCAATAGCCAAGCTCTGTCCCTGTTCTCTGTTCTTATCTGTAGTGCTGTTTGTGTCTCTCTCTGCCACTTAAGAGCTCATCTATAATTCAGCGCTCTAAATAAAGAGGCAGCGCTGTGATAAAACAGGACTCTGGGAGCACCGGGTGGACTATCCAAGCTCATCGCCGTAGGGCCTGAACCCAAAACACACACAACAACACCACATAACAACACACACCACTGGATGCAATATTCTCTCAATATTTCCCAGCCTTCTGATGAAATTTTATATCTCTAGATAGATATGTTTTTGCTCTGACATGGTTTAAAGGGGGGGAATTAGAGGAACCATCAGTTTGAGCAAACAACCACTATTGCAAATAGATTCAAAAGATTTAATTCAAGAAGTAACATACAGTAAAAATCCATTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66770 True 981 lncRNA 0.36 1 14607086 14608066

Neighbor

gene id symbol gene type direction distance location
CI01000009_14581261_14582899 NA coding upstream 24092 14580880 ~ 14582994 (+)
CI01000009_14474300_14474593 NA coding upstream 132316 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 155544 14432716 ~ 14451542 (+)
CI01000009_14380226_14386430 ASB1 coding upstream 220220 14380226 ~ 14386866 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding upstream 231403 14348389 ~ 14375683 (+)
CI01000009_14616605_14620028 NA coding downstream 7305 14615371 ~ 14620238 (+)
CI01000009_14659692_14664324 NA coding downstream 51113 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 73588 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 249647 14857713 ~ 14859636 (+)
CI01000009_14862429_14898325 SLC4A3 coding downstream 253666 14861732 ~ 14898549 (+)
CI01000009_14595691_14611767 NA non-coding upstream 309 14595436 ~ 14612569 (+)
G58623 NA non-coding upstream 8604 14598267 ~ 14598482 (+)
G58622 NA non-coding upstream 9184 14597589 ~ 14597902 (+)
G58621 NA non-coding upstream 9675 14597085 ~ 14597411 (+)
G58620 NA non-coding upstream 14200 14592653 ~ 14592886 (+)
G58631 NA non-coding downstream 940 14609006 ~ 14609341 (+)
G58572 NA non-coding downstream 2836 14610902 ~ 14676373 (+)
G58676 NA non-coding downstream 96413 14704479 ~ 14710140 (+)
G58686 NA non-coding downstream 112822 14720888 ~ 14721094 (+)
G58713 NA non-coding downstream 155756 14763822 ~ 14764679 (+)
G58558 NA other upstream 105572 14496936 ~ 14501514 (+)
G58455 NA other upstream 348560 14246695 ~ 14258526 (+)
G58382 NA other upstream 567185 14039757 ~ 14039901 (+)
G58028 NA other upstream 1463478 13140378 ~ 13143608 (+)
G57701 NA other upstream 1583948 13006643 ~ 13023138 (+)
G58649 NA other downstream 41658 14649724 ~ 14652022 (+)
G58711 NA other downstream 158593 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 317163 14924621 ~ 14952571 (+)
G60028 NA other downstream 743981 15352047 ~ 15376169 (+)

Expression


Co-expression Network