LOC103032675 (kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581)


Basic Information

Item Value
gene id LOC103032675
gene name kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 52574938 ~ 52609821 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252940.2
acagacagagagagagagtgtttggGTGAGTAAGTGGTGTGGAGGGATGGAGTGATGAAGGAGCACCAGCCTATATAGTAAGACCACTCCGACACCACCACGCGTGAACCTGCAGCGCCTAGAGCTGCTGGAAATCACTGCGCGCTGACACATCTCCACCAGTAGGCGCATGGGCAGCAGATGGAGGGGCTATGAAGAGCTGAGGCGAGCCAAAGACGGACCACCGCTGCTCCATTGTGCCTCCCACTCTCCATTATACTGCAGCCTGCCGGGAGAACCTGCACCATGTAGAACTTAAAGAAGGAACCTGAAGCGCGCGCGCGTTTGTTTTGCAGTTTAGCGCCAGGATGCAGCAGGCTGCAGCATCAGCACCACCACCTCAGTGAAGGCGATGATGAAGCCGCGCGTACTCCCAGCCTGGGCTGCATCCACAGCCACGAGCGCCTTTCTGCTGTAGGAGCGACACTTTGCCGCATTTTTTAAGCGTAATTTTTTCGGCATTGTTTACGAGCGCTATATTTTTCCATGCTCTTTTTGCTAAGATGAAATTTCCAACGGAAAATCCAAGGAAACCAGGGGCCAACCTGGGACCACCGCCAGTGGCTGTGCAGACCAACCTGGTTCCACCCAAGAAAGTCCAGCCAGGGATGTTGCAGTCCAGCCTGGTGCAGGCCAGTGTGGCCACCATGCAGAACCCGATGGGCTGCTCCCTGCCTCGCCTGTCGGTGTCTCGGCCGGCCAGCATGGTGGCCAGCATGGATGCGGTGGCGGACGGTTCTGCGCCTTTCACTGTCATGAAGTGGAAGACAGTGTTGGCCGTGTTTGTGGTAGTGGTGGCCTATCTAGTGGCCGGTGGTCTGGGCTTCCGCGCTCTGGAGCAGCCTTTTGAGAGCAACCAGAAGGACACCATCACAGCCGAGAAGGCCGCCTTTCTGCAGAAACATCCCTGCGTCACGCGCAACGAGCTGGAGGAGCTCATCCAGCACTCCATCGATGCGTTCAGTGCTGGAGTCAGTCCTATAGGAGACACCACCTATAACTTCAGCTACTGGGACCTGGGCAGTGCCTTCTTCTTCGCCGGGACTGTGATCACCACCATAGGCTATGGAAACATCGCCCCGAGCACGGAGGGCGGGAAAATCTTCTGTATTCTCTATGCGATTTTCGGCATCCCTCTTTTCGGCTTCCTGCTGGCTGGCGTCGGGGACCAGCTGGGAACCATTTTTGTGAAGACGATCGCCAAGGTGGAGAAAATATTCAGGCGCAAACACAACCAGATCAGTCAGACGAAGATTCGTGTGGCCTCTACTCTGCTCTTCATCCTGGTCGGCTGCATTGTCTTCGTCACCATTCCTGCACTCATCTTTCAACACATAGAGGGCTGGACGGGGCTGGATGCTATTTATTTTGTGGTTATCACCCTGACGACAGTGGGCATTGGGGATTATGTGGCAGGAGGTGATAGAAGAATAGAATATTATAAATGGTACAAGCCGCTGGTGTGGTTCTGGATCCTGGTTGGTTTGGCCTACTTCGCTGCTGTGCTGAGTATGATCGGAGACTGGCTAAGAGTCCTCTCAAAAAAGACGAAGGAAGAGgtTGGGGAGTTTAAAGCCCACGCAGCCGAATGGAAAGCCAATGTGAGGGCAGAATTCAGGGAAACGAGGCGGCGGCTCAGCGTCGAAGTTCATGACAAACTACAGCGGGCTGCCACCATCCGCAGCATGGAGCGACGACAACTGGGCCTGGACCAGCGTGCTCACTCTCTGGACATGCTGTCCCCCGAGAGGAGAGCTGCCTTCAACAGCCTGGACAACAACAGCTATAAGACATCGTCTCAGGAGAGCATCGACACCAAGCTGAACAACCTGCGCCTGCGAGTAGAACAGAGCGAACACCGGCGCAGCGACCCCAACCAGGCCTCGTCCGAGGACAACATCTTCAACCGCCTGAGCTCAGTCACCAAACTGACCAAGCGCAACAAGACCCGGGAACTGAAAAAGAACATCCCAGGCGACGGACGGAGGGCCAACAGCGCCGTGGAGCctgaggagaagaaggagatgGAGGAAGAAGAGCTGGAGAAGGATATCAACACAAGCTTAACCAACCTGCCCCTGTTTGTGGAGAGCCCCAAATATCTGAACGGATTTGTACCGGTGCCACTACAGAccaaagaggaggaagaagagagcaagaaaaaacTTGAAACCGCTGAGGAGTTCCAGGTGCAGATGGACGAAGACTAGAcaggaaaaaaagtgtttttttaggaAAACTCAAGTGCCTTATCTCACCTGTTCCCTCAACAGGAACtctaatgtttaatgtttgttgAACTGTTCACTGTGTCCTGACAACTTGATCATGCAACTGGAAACCTGAAAGAATCCTTGGTCCCTACTGGTGACCAGACCACAGAAttgtaaaacactgcaaaaaatgctATCTTGATGTGAAATCATCTTTAATCTTCTctaaatattgaataattctCATTTTGAGATTCTAAATGCATTCTGAGATTAATTGCATTACGTTTAGATAGGCCTGTCCCAatagcaacacattttttaaatatatccaCCAAGAAATTAtggcaataaacaaaatatattgtaataatacaCCATTTAATGCCATATAATGTGaattattttgataaaatattaaattcccATTAATACTAATTCACATTGGTATGGCTTGTTCAGTAAACACAAAGGTCATCAAAAAATATTATCGataaattgataaaataatGATCATTACAGGCCAAATTCTAGACATTTTATCTAATAAAAGTGTCTTATTCTATTGACAgatgattgtgcttattttaagctttaaaacttgacaaaaaacaatattatacgTATTACCTCTTGAAATAAACGGAAAGACagtgaaattaaatattatcaCCAGACTAAAtgacttaattaaaaaaagtctataaatgtatgaaatactataaataaaaaaattacaaaaatgtataataactctattaagaaatatttaatattcagacCAGTTTAAAGATGGTTATATTTACAATTATACgatttgtttgcagtgtggCTCCTGAAGATGGAATAATAATATCACTCATAAAGTGTGGATCAAGACCAATAAGTAACTGTAGCAAAGTGCAATGACATTTACCGTGCCCTGAGACTGTTCTCCACTCTTATACCGAGCTCTCCCTCTCGGTGGACTTTAGCTAGGGTACCCTAGGAGTGCTAAACAGAAGAAGACTTGAAGTTGCGTTGCATCGGAAGAGACTTGTGCACCAGTATTCCTTCAATATGCCCCCGAATTCAGATTCCCCCAAAGATAGTAGAGAACAATGGACTAAAAACTTTCATGCATGGTCTTGGATCTTTTACAAAGTACCTTGTCCCAGTTATGCTGTCCATTTCACGGAATACTACCAATGAAATCTCA

Function

symbol description
kcnk10a Predicted to enable potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; heart; male organism; myoseptum; and notochord. Orthologous to human KCNK10 (potassium two pore domain channel subfamily K member 10).

NR:

description
potassium channel subfamily K member 10-like

GO: NA

KEGG:

id description
K04920 KCNK10, K2P10.1; potassium channel subfamily K member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252940.2 True 3450 mRNA 0.47 7 52574938 52609821

Neighbor

gene id symbol gene type direction distance location
trnac-gca_8 NA coding upstream 106095 52468772 ~ 52468843 (+)
LOC103030894 NA coding upstream 162858 52403882 ~ 52412080 (+)
ddhd1 NA coding upstream 174120 52382945 ~ 52400818 (+)
psmc6 psmc6,LOC107668141,LOC107549540,LOC107582103 coding upstream 200791 52367883 ~ 52374147 (+)
LOC103029411 NA coding upstream 247136 52321992 ~ 52327802 (+)
LOC111188745 NA coding downstream 159421 52769242 ~ 52781864 (+)
LOC103033541 LOC108413844,LOC108417958 coding downstream 175838 52785659 ~ 52789369 (+)
LOC111188773 LOC108417958 coding downstream 201232 52811053 ~ 52816494 (+)
LOC103041583 LOC108417958 coding downstream 215363 52825184 ~ 52829284 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 1353741 53963562 ~ 54049416 (+)
G27763 meis1,LOC103032373,LOC100690952,LOC106953003,LOC102195920 non-coding upstream 43938 52528728 ~ 52531000 (+)
G27716 NA non-coding upstream 193933 52379856 ~ 52381005 (+)
LOC111188740 NA non-coding upstream 210766 52362005 ~ 52364172 (+)
G27701 NA non-coding upstream 226682 52342948 ~ 52348256 (+)
G27684 NA non-coding upstream 259443 52315112 ~ 52315495 (+)
G27775 c25h14orf132,LOC108413331,LOC105892943,LOC107549545,LOC107582175 non-coding downstream 57514 52667335 ~ 52672114 (+)
G27834 NA non-coding downstream 294499 52904320 ~ 52904678 (+)
G27849 NA non-coding downstream 419988 53029809 ~ 53030010 (+)
G27873 NA non-coding downstream 694107 53303928 ~ 53304405 (+)
G27875 NA non-coding downstream 718051 53327872 ~ 53330777 (+)
G27729 LOC103457336,LOC100194557,LOC103359577 other upstream 118774 52454431 ~ 52456164 (+)
G27683 LOC108412685 other upstream 260672 52314025 ~ 52314266 (+)
dsel dsel,LOC108411752,LOC105896186,LOC106590194 other upstream 484305 52083282 ~ 52090633 (+)
G27489 NA other upstream 1396564 51174488 ~ 51178374 (+)
lyrm2 lyrm2 other upstream 1802776 50769863 ~ 50772162 (+)
LOC111188765 glrx5,LOC106571612 other downstream 150292 52760113 ~ 52768976 (+)
trnah-gug NA other downstream 1013002 53622823 ~ 53622894 (+)
trnae-uuc_2 NA other downstream 1013361 53623182 ~ 53623253 (+)
trnar-acg NA other downstream 1013628 53623449 ~ 53623521 (+)
trnam-cau_5 NA other downstream 1013796 53623617 ~ 53623689 (+)

Expression


Co-expression Network