LOC103024560 (snx9,snx9b,LOC103024560,LOC108424479)


Basic Information

Item Value
gene id LOC103024560
gene name snx9,snx9b,LOC103024560,LOC108424479
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 55266087 ~ 55296450 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253921.3
CCGGTTTGGGAGTGAGTAGCTGGCCGGAGTTGGTGAGTGTTGAGGGGGACAGCAGCGTTGGGATCAGGTCGGGGTCTCCGCGGCGGTGTTGGTATCGGTAGAGTCGCGGGAcggggctgtgtgtgtgagagagctcgGAGCTCGGTGTGTGGGCTGTggaggagctgtgtgtgtgtgtgagagagagactcgCGGACTGTGAAATGTGTtgaggcagcagcagctccagcagcagcagcggctccTCAGGACGGACTGTTTCCACCCAagttcacagagagagagagagaaatgagcgCGTGAAGAGTGGAGAACTGCCCCTCAGAGAGACACCACTCCTCTAATGACTGATTAATGAGGTCGGAATGGCATCACAGGCGCAGGTTTTATATGACTTCTCTGCTGAGCCGGGGAATAACGAGCTTtcagtgagagagggagagacaatcACAATCACTAACCAGAACATTGGAGGCGGCTGGATCGAGGCAAGGAACTCCAGAGGAGAAGTTGGCCTGGTGCCAGAGGACTATGTTGAGCTCGGTAAGACTCCTGCAGCAGGAGGAAGCACAGCCCCCCTTGACCTGACCTTCTTTGACAGTCAGGCCCCAGCCCCAGCCAGTACCACACAAAGTCAGGTGGATGTAGTTCAGGTGGAAAGCCCAGACACTCCCCTCACCCCTGTCTCCCCGACTTCCCCTGATGAGACGAGTAACGGTAATGACCCATGGGCAGTGTTTGACACTAACGCCTCCGGAGGCTTCTCCAACAACTGGGCGGCACAGCCAGAGGGCACAGAGACGGGCAAGAACAGCAACAATGCTTGGGGCTCCACATCATATGGTCACCCACAAGCCTATCAGGGCCcagACATTTATCCATATCCATACTTAATTGATTACACAGGCGTTGAGGATGATGAGTGGGATGATGAGTGGGATGAGAGGAAGTCGTCAGGGGGCTATGCTGAAGGAGACATGGGAGAGGGCGGGGCAATGAACAGAGGAGGAGTGCATGGGTCCTCAATGAAAATCGCCCTCAACAAATTCCCTGGCTTCTCCAAATCAGGTCCGGAGCTGTACCTCCTATCCAAACAGACTGCCAAAGGAAACAAATTATCTATATATAGAGGGGAGGTTGGGCCAGTGTGGGAATATCCAGAGATCCAGCTGGACTGCGTTGTAGCAGACCCAAAAAAGGGCTCCAAAATGTATGGCCTCAAGAGCTACATTGAATATCAAGTCACACCCAATACCACCAACAAACCTGTCAATCATAGATACAAGCACTTTGACTGGCTGTATGAGAGACTTTTGGAAAAATTTGGTTCTGCCATACCAATCCCATGCTTACCTGACAAGCAAGTGACCGGCCGCTTTGAAGAGGAGTTCATTAAGATGCGGATGGAGAGACTTCAGGGCTGGATGACGAGAATGTGTCGGCACCCGGTCGTCTCCAGCAGTGAGGTCTTTCAGCTCTTCCTCACCTACAAGGATGAGAAGGATTGGAAAACGGGgaagagaaaagcagagaagGATGAAACGGTGGGGGTAATGATCTTCTCCACAATAGAACCAGAAGGAGTGCCTGACTTGGAAATTCATGAAGTagaACAGAAGTGTGAGCAGTTCAGTCGCTTCACCAAAGCGATGGATGATGGAGTAAAGGATCTGTTGACAGTAGGAAATGAGCACTGGAAGCGCTGCACAGGACCTCTCCCTAAGGAGTACCAGCGGATTGGCAAAGCCTTCCAGAACCTCTCGTCCGTATTTACCAGCAGTGGATATGAAGGAGAGGCCACACTAACTGACGCTCTGACAGCAGCAGGAAAGACCTATGAGGAAATCGCTCAGATGGTGGCAGAACAGCCCAGAAAGGATCTTCATTTTCTCATGGAGACCAATAATGAGTACAAAGGGCTTCTGGGTTGCTTCCCTGACACCATTGGGGTTCACAAGGCTGCCATAGAGAAAGTAAAAGAGGCTGACAAACTGGTGGCCGCCAGTAAAATAACCTCTGCAGAAAAGGTCACCATGGGCAAGCGAGCCAGCTCTATGTCATATGCATTACAAGCGGAGATGAACCACTTCCACAGCAACCGCATCTATGACTACAACAGGGTGATGCAGCAGTACCTGGAGGAGCAAGTGAAGTTCTATGAGACgATTGCTGAGAAGCTGAGACACGCTCACAGTCAGTTCACGACCATGTGAAGGAGAGGACTGCACTGAGCCAGGCACTGCTGCACTGACAAGGCCCTCTCTTAAATATCTCCACTCAgattctccctctctttctcacacacttgCTATTGCTTTCTTTTCTGTTCCTCTTTCTTCTTCAGCTCTATGTTTGTCCATGACCTCAGAGCCATAACAAGCTTCTGTTGATCTCAGGCcaaaggcagaaaaaaataccacaaagcctctctctttctttcaacacAAAACCACCCCAGCCATTCTCAAATTAATTACAAAGACACCAGAGATTTTTAGCTTGATCTCACATCTTAATCTCAGGTGTCACACCTGTAAGTGCAATTACCACagactgtgattttaacacgtTTCCGTGAACAGACTTGAAACGAGTTcccaataaaaatgaaaagtgaaaGCTCCTCCCTGATATTATCGGTGTCGAATATGACAATagattttctcttcttttttacatacagggggaaaaaaatcagcAGTTATGAAGGAGGTTAAAAACACAGCTGTGTCTctcaaacaataaacagcagCCACAGCTTGATTGCTTTATCCCCAGTGAAAAGGCAGTAAAAGGCTGGATTGATCATAAAGCCCTGCTAAATCTATGCATCCATCATTTGTTGTGCATTTCCTTAATTCGTTTTAATTGGTTTCACAGAGCCACTTTTAGCCAACCTCATTTGTGTTATTTGCTGTCGTCACTACGGTTCTCCAGTGGGATTTGGTGACGAAAGAAAAGGATGCActtgacagaaagagaaaggggaAGTGAGTATCTTACAATGCTTACTACTGTAccatttttttgtgtgcacACTCATTTGCAATAGCAGAGGCATGGCCTCCCCCACTGTGCCTTTATATGTGTGTGCTGAAGAAGTTCAGCACACTCTCTACGCCGTGCACTTTACATGCAGAACCCTTTTCGTTAGtgtcataacaaaaaaaactatatgcATATCACTTAACAAAGCCGTCTGTCATCTCTGGAGTACATAAAGGAGGGCTGGTCCTTTTTTTCGCACCACAGATCACAtccaaatataatttttaatatatatattttttgttttttctttcaaagCCGAACACATTTTTGCTTCTTTCGCCTGCCGCTAAGCAATGTTTTCTGCTACATTTTCACTTCAGTGCAATCTTCCTTTCTCACgcacttctctctttcttctcacaTTTAGCATATATATTCTTTATCCGATGCATGTGCTTTATTTCTTGATGTATCGTTTTATGTATAGCAATGTTTGCAAGTCATTTGCACCAAGAATGATAAACACAAAAAGTAATTCAGATATGAtttaataaactctgatttgTACTCTA
>XM_007253922.3
CCGGTTTGGGAGTGAGTAGCTGGCCGGAGTTGGTGAGTGTTGAGGGGGACAGCAGCGTTGGGATCAGGTCGGGGTCTCCGCGGCGGTGTTGGTATCGGTAGAGTCGCGGGAcggggctgtgtgtgtgagagagctcgGAGCTCGGTGTGTGGGCTGTggaggagctgtgtgtgtgtgtgagagagagactcgCGGACTGTGAAATGTGTtgaggcagcagcagctccagcagcagcagcggctccTCAGGACGGACTGTTTCCACCCAagttcacagagagagagagagaaatgagcgCGTGAAGAGTGGAGAACTGCCCCTCAGAGAGACACCACTCCTCTAATGACTGATTAATGAGGTCGGAATGGCATCACAGGCGCAGGTTTTATATGACTTCTCTGCTGAGCCGGGGAATAACGAGCTTtcagtgagagagggagagacaatcACAATCACTAACCAGAACATTGGAGGCGGCTGGATCGAGGCAAGGAACTCCAGAGGAGAAGTTGGCCTGGTGCCAGAGGACTATGTTGAGCTCGGTAAGACTCCTGCAGCAGGAGGAAGCACAGCCCCCCTTGACCTGACCTTCTTTGACAGTCAGGCCCCAGCCCCAGCCAGTACCACACAAAGTCAGGTGGATGTAGTTCAGGTGGAAAGCCCAGACACTCCCCTCACCCCTGTCTCCCCGACTTCCCCTGATGAGACGAGTAACGGTAATGACCCATGGGCAGTGTTTGACACTAACGCCTCCGGAGGCTTCTCCAACAACTGGGCGGCACAGCCAGAGGGCACAGAGACGGGCAAGAACAGCAACAATGCTTGGGGCTCCACATCATATGGTCACCCACAAGCCTATCAGGGCCcagGCGTTGAGGATGATGAGTGGGATGATGAGTGGGATGAGAGGAAGTCGTCAGGGGGCTATGCTGAAGGAGACATGGGAGAGGGCGGGGCAATGAACAGAGGAGGAGTGCATGGGTCCTCAATGAAAATCGCCCTCAACAAATTCCCTGGCTTCTCCAAATCAGGTCCGGAGCTGTACCTCCTATCCAAACAGACTGCCAAAGGAAACAAATTATCTATATATAGAGGGGAGGTTGGGCCAGTGTGGGAATATCCAGAGATCCAGCTGGACTGCGTTGTAGCAGACCCAAAAAAGGGCTCCAAAATGTATGGCCTCAAGAGCTACATTGAATATCAAGTCACACCCAATACCACCAACAAACCTGTCAATCATAGATACAAGCACTTTGACTGGCTGTATGAGAGACTTTTGGAAAAATTTGGTTCTGCCATACCAATCCCATGCTTACCTGACAAGCAAGTGACCGGCCGCTTTGAAGAGGAGTTCATTAAGATGCGGATGGAGAGACTTCAGGGCTGGATGACGAGAATGTGTCGGCACCCGGTCGTCTCCAGCAGTGAGGTCTTTCAGCTCTTCCTCACCTACAAGGATGAGAAGGATTGGAAAACGGGgaagagaaaagcagagaagGATGAAACGGTGGGGGTAATGATCTTCTCCACAATAGAACCAGAAGGAGTGCCTGACTTGGAAATTCATGAAGTagaACAGAAGTGTGAGCAGTTCAGTCGCTTCACCAAAGCGATGGATGATGGAGTAAAGGATCTGTTGACAGTAGGAAATGAGCACTGGAAGCGCTGCACAGGACCTCTCCCTAAGGAGTACCAGCGGATTGGCAAAGCCTTCCAGAACCTCTCGTCCGTATTTACCAGCAGTGGATATGAAGGAGAGGCCACACTAACTGACGCTCTGACAGCAGCAGGAAAGACCTATGAGGAAATCGCTCAGATGGTGGCAGAACAGCCCAGAAAGGATCTTCATTTTCTCATGGAGACCAATAATGAGTACAAAGGGCTTCTGGGTTGCTTCCCTGACACCATTGGGGTTCACAAGGCTGCCATAGAGAAAGTAAAAGAGGCTGACAAACTGGTGGCCGCCAGTAAAATAACCTCTGCAGAAAAGGTCACCATGGGCAAGCGAGCCAGCTCTATGTCATATGCATTACAAGCGGAGATGAACCACTTCCACAGCAACCGCATCTATGACTACAACAGGGTGATGCAGCAGTACCTGGAGGAGCAAGTGAAGTTCTATGAGACgATTGCTGAGAAGCTGAGACACGCTCACAGTCAGTTCACGACCATGTGAAGGAGAGGACTGCACTGAGCCAGGCACTGCTGCACTGACAAGGCCCTCTCTTAAATATCTCCACTCAgattctccctctctttctcacacacttgCTATTGCTTTCTTTTCTGTTCCTCTTTCTTCTTCAGCTCTATGTTTGTCCATGACCTCAGAGCCATAACAAGCTTCTGTTGATCTCAGGCcaaaggcagaaaaaaataccacaaagcctctctctttctttcaacacAAAACCACCCCAGCCATTCTCAAATTAATTACAAAGACACCAGAGATTTTTAGCTTGATCTCACATCTTAATCTCAGGTGTCACACCTGTAAGTGCAATTACCACagactgtgattttaacacgtTTCCGTGAACAGACTTGAAACGAGTTcccaataaaaatgaaaagtgaaaGCTCCTCCCTGATATTATCGGTGTCGAATATGACAATagattttctcttcttttttacatacagggggaaaaaaatcagcAGTTATGAAGGAGGTTAAAAACACAGCTGTGTCTctcaaacaataaacagcagCCACAGCTTGATTGCTTTATCCCCAGTGAAAAGGCAGTAAAAGGCTGGATTGATCATAAAGCCCTGCTAAATCTATGCATCCATCATTTGTTGTGCATTTCCTTAATTCGTTTTAATTGGTTTCACAGAGCCACTTTTAGCCAACCTCATTTGTGTTATTTGCTGTCGTCACTACGGTTCTCCAGTGGGATTTGGTGACGAAAGAAAAGGATGCActtgacagaaagagaaaggggaAGTGAGTATCTTACAATGCTTACTACTGTAccatttttttgtgtgcacACTCATTTGCAATAGCAGAGGCATGGCCTCCCCCACTGTGCCTTTATATGTGTGTGCTGAAGAAGTTCAGCACACTCTCTACGCCGTGCACTTTACATGCAGAACCCTTTTCGTTAGtgtcataacaaaaaaaactatatgcATATCACTTAACAAAGCCGTCTGTCATCTCTGGAGTACATAAAGGAGGGCTGGTCCTTTTTTTCGCACCACAGATCACAtccaaatataatttttaatatatatattttttgttttttctttcaaagCCGAACACATTTTTGCTTCTTTCGCCTGCCGCTAAGCAATGTTTTCTGCTACATTTTCACTTCAGTGCAATCTTCCTTTCTCACgcacttctctctttcttctcacaTTTAGCATATATATTCTTTATCCGATGCATGTGCTTTATTTCTTGATGTATCGTTTTATGTATAGCAATGTTTGCAAGTCATTTGCACCAAGAATGATAAACACAAAAAGTAATTCAGATATGAtttaataaactctgatttgTACTCTA
>XM_007253923.3
CCGGTTTGGGAGTGAGTAGCTGGCCGGAGTTGGTGAGTGTTGAGGGGGACAGCAGCGTTGGGATCAGGTCGGGGTCTCCGCGGCGGTGTTGGTATCGGTAGAGTCGCGGGAcggggctgtgtgtgtgagagagctcgGAGCTCGGTGTGTGGGCTGTggaggagctgtgtgtgtgtgtgagagagagactcgCGGACTGTGAAATGTGTtgaggcagcagcagctccagcagcagcagcggctccTCAGGACGGACTGTTTCCACCCAagttcacagagagagagagagaaatgagcgCGTGAAGAGTGGAGAACTGCCCCTCAGAGAGACACCACTCCTCTAATGACTGATTAATGAGGTCGGAATGGCATCACAGGCGCAGGTTTTATATGACTTCTCTGCTGAGCCGGGGAATAACGAGCTTtcagtgagagagggagagacaatcACAATCACTAACCAGAACATTGGAGGCGGCTGGATCGAGGCAAGGAACTCCAGAGGAGAAGTTGGCCTGGTGCCAGAGGACTATGTTGAGCTCGGTAAGACTCCTGCAGCAGGAGGAAGCACAGCCCCCCTTGACCTGACCTTCTTTGACAGTCAGGCCCCAGCCCCAGCCAGTACCACACAAAGTCAGACGAGTAACGGTAATGACCCATGGGCAGTGTTTGACACTAACGCCTCCGGAGGCTTCTCCAACAACTGGGCGGCACAGCCAGAGGGCACAGAGACGGGCAAGAACAGCAACAATGCTTGGGGCTCCACATCATATGGTCACCCACAAGCCTATCAGGGCCcagACATTTATCCATATCCATACTTAATTGATTACACAGGCGTTGAGGATGATGAGTGGGATGATGAGTGGGATGAGAGGAAGTCGTCAGGGGGCTATGCTGAAGGAGACATGGGAGAGGGCGGGGCAATGAACAGAGGAGGAGTGCATGGGTCCTCAATGAAAATCGCCCTCAACAAATTCCCTGGCTTCTCCAAATCAGGTCCGGAGCTGTACCTCCTATCCAAACAGACTGCCAAAGGAAACAAATTATCTATATATAGAGGGGAGGTTGGGCCAGTGTGGGAATATCCAGAGATCCAGCTGGACTGCGTTGTAGCAGACCCAAAAAAGGGCTCCAAAATGTATGGCCTCAAGAGCTACATTGAATATCAAGTCACACCCAATACCACCAACAAACCTGTCAATCATAGATACAAGCACTTTGACTGGCTGTATGAGAGACTTTTGGAAAAATTTGGTTCTGCCATACCAATCCCATGCTTACCTGACAAGCAAGTGACCGGCCGCTTTGAAGAGGAGTTCATTAAGATGCGGATGGAGAGACTTCAGGGCTGGATGACGAGAATGTGTCGGCACCCGGTCGTCTCCAGCAGTGAGGTCTTTCAGCTCTTCCTCACCTACAAGGATGAGAAGGATTGGAAAACGGGgaagagaaaagcagagaagGATGAAACGGTGGGGGTAATGATCTTCTCCACAATAGAACCAGAAGGAGTGCCTGACTTGGAAATTCATGAAGTagaACAGAAGTGTGAGCAGTTCAGTCGCTTCACCAAAGCGATGGATGATGGAGTAAAGGATCTGTTGACAGTAGGAAATGAGCACTGGAAGCGCTGCACAGGACCTCTCCCTAAGGAGTACCAGCGGATTGGCAAAGCCTTCCAGAACCTCTCGTCCGTATTTACCAGCAGTGGATATGAAGGAGAGGCCACACTAACTGACGCTCTGACAGCAGCAGGAAAGACCTATGAGGAAATCGCTCAGATGGTGGCAGAACAGCCCAGAAAGGATCTTCATTTTCTCATGGAGACCAATAATGAGTACAAAGGGCTTCTGGGTTGCTTCCCTGACACCATTGGGGTTCACAAGGCTGCCATAGAGAAAGTAAAAGAGGCTGACAAACTGGTGGCCGCCAGTAAAATAACCTCTGCAGAAAAGGTCACCATGGGCAAGCGAGCCAGCTCTATGTCATATGCATTACAAGCGGAGATGAACCACTTCCACAGCAACCGCATCTATGACTACAACAGGGTGATGCAGCAGTACCTGGAGGAGCAAGTGAAGTTCTATGAGACgATTGCTGAGAAGCTGAGACACGCTCACAGTCAGTTCACGACCATGTGAAGGAGAGGACTGCACTGAGCCAGGCACTGCTGCACTGACAAGGCCCTCTCTTAAATATCTCCACTCAgattctccctctctttctcacacacttgCTATTGCTTTCTTTTCTGTTCCTCTTTCTTCTTCAGCTCTATGTTTGTCCATGACCTCAGAGCCATAACAAGCTTCTGTTGATCTCAGGCcaaaggcagaaaaaaataccacaaagcctctctctttctttcaacacAAAACCACCCCAGCCATTCTCAAATTAATTACAAAGACACCAGAGATTTTTAGCTTGATCTCACATCTTAATCTCAGGTGTCACACCTGTAAGTGCAATTACCACagactgtgattttaacacgtTTCCGTGAACAGACTTGAAACGAGTTcccaataaaaatgaaaagtgaaaGCTCCTCCCTGATATTATCGGTGTCGAATATGACAATagattttctcttcttttttacatacagggggaaaaaaatcagcAGTTATGAAGGAGGTTAAAAACACAGCTGTGTCTctcaaacaataaacagcagCCACAGCTTGATTGCTTTATCCCCAGTGAAAAGGCAGTAAAAGGCTGGATTGATCATAAAGCCCTGCTAAATCTATGCATCCATCATTTGTTGTGCATTTCCTTAATTCGTTTTAATTGGTTTCACAGAGCCACTTTTAGCCAACCTCATTTGTGTTATTTGCTGTCGTCACTACGGTTCTCCAGTGGGATTTGGTGACGAAAGAAAAGGATGCActtgacagaaagagaaaggggaAGTGAGTATCTTACAATGCTTACTACTGTAccatttttttgtgtgcacACTCATTTGCAATAGCAGAGGCATGGCCTCCCCCACTGTGCCTTTATATGTGTGTGCTGAAGAAGTTCAGCACACTCTCTACGCCGTGCACTTTACATGCAGAACCCTTTTCGTTAGtgtcataacaaaaaaaactatatgcATATCACTTAACAAAGCCGTCTGTCATCTCTGGAGTACATAAAGGAGGGCTGGTCCTTTTTTTCGCACCACAGATCACAtccaaatataatttttaatatatatattttttgttttttctttcaaagCCGAACACATTTTTGCTTCTTTCGCCTGCCGCTAAGCAATGTTTTCTGCTACATTTTCACTTCAGTGCAATCTTCCTTTCTCACgcacttctctctttcttctcacaTTTAGCATATATATTCTTTATCCGATGCATGTGCTTTATTTCTTGATGTATCGTTTTATGTATAGCAATGTTTGCAAGTCATTTGCACCAAGAATGATAAACACAAAAAGTAATTCAGATATGAtttaataaactctgatttgTACTCTA
>XM_007253924.3
CGGTTTGGGAGTGAGTAGCTGGCCGGAGTTGGTGAGTGTTGAGGGGGACAGCAGCGTTGGGATCAGGTCGGGGTCTCCGCGGCGGTGTTGGTATCGGTAGAGTCGCGGGAcggggctgtgtgtgtgagagagctcgGAGCTCGGTGTGTGGGCTGTggaggagctgtgtgtgtgtgtgagagagagactcgCGGACTGTGAAATGTGTtgaggcagcagcagctccagcagcagcagcggctccTCAGGACGGACTGTTTCCACCCAagttcacagagagagagagagaaatgagcgCGTGAAGAGTGGAGAACTGCCCCTCAGAGAGACACCACTCCTCTAATGACTGATTAATGAGGTCGGAATGGCATCACAGGCGCAGGTTTTATATGACTTCTCTGCTGAGCCGGGGAATAACGAGCTTtcagtgagagagggagagacaatcACAATCACTAACCAGAACATTGGAGGCGGCTGGATCGAGGCAAGGAACTCCAGAGGAGAAGTTGGCCTGGTGCCAGAGGACTATGTTGAGCTCGGTAAGACTCCTGCAGCAGGAGGAAGCACAGCCCCCCTTGACCTGACCTTCTTTGACAGTCAGGCCCCAGCCCCAGCCAGTACCACACAAAGTCAGACGAGTAACGGTAATGACCCATGGGCAGTGTTTGACACTAACGCCTCCGGAGGCTTCTCCAACAACTGGGCGGCACAGCCAGAGGGCACAGAGACGGGCAAGAACAGCAACAATGCTTGGGGCTCCACATCATATGGTCACCCACAAGCCTATCAGGGCCcagGCGTTGAGGATGATGAGTGGGATGATGAGTGGGATGAGAGGAAGTCGTCAGGGGGCTATGCTGAAGGAGACATGGGAGAGGGCGGGGCAATGAACAGAGGAGGAGTGCATGGGTCCTCAATGAAAATCGCCCTCAACAAATTCCCTGGCTTCTCCAAATCAGGTCCGGAGCTGTACCTCCTATCCAAACAGACTGCCAAAGGAAACAAATTATCTATATATAGAGGGGAGGTTGGGCCAGTGTGGGAATATCCAGAGATCCAGCTGGACTGCGTTGTAGCAGACCCAAAAAAGGGCTCCAAAATGTATGGCCTCAAGAGCTACATTGAATATCAAGTCACACCCAATACCACCAACAAACCTGTCAATCATAGATACAAGCACTTTGACTGGCTGTATGAGAGACTTTTGGAAAAATTTGGTTCTGCCATACCAATCCCATGCTTACCTGACAAGCAAGTGACCGGCCGCTTTGAAGAGGAGTTCATTAAGATGCGGATGGAGAGACTTCAGGGCTGGATGACGAGAATGTGTCGGCACCCGGTCGTCTCCAGCAGTGAGGTCTTTCAGCTCTTCCTCACCTACAAGGATGAGAAGGATTGGAAAACGGGgaagagaaaagcagagaagGATGAAACGGTGGGGGTAATGATCTTCTCCACAATAGAACCAGAAGGAGTGCCTGACTTGGAAATTCATGAAGTagaACAGAAGTGTGAGCAGTTCAGTCGCTTCACCAAAGCGATGGATGATGGAGTAAAGGATCTGTTGACAGTAGGAAATGAGCACTGGAAGCGCTGCACAGGACCTCTCCCTAAGGAGTACCAGCGGATTGGCAAAGCCTTCCAGAACCTCTCGTCCGTATTTACCAGCAGTGGATATGAAGGAGAGGCCACACTAACTGACGCTCTGACAGCAGCAGGAAAGACCTATGAGGAAATCGCTCAGATGGTGGCAGAACAGCCCAGAAAGGATCTTCATTTTCTCATGGAGACCAATAATGAGTACAAAGGGCTTCTGGGTTGCTTCCCTGACACCATTGGGGTTCACAAGGCTGCCATAGAGAAAGTAAAAGAGGCTGACAAACTGGTGGCCGCCAGTAAAATAACCTCTGCAGAAAAGGTCACCATGGGCAAGCGAGCCAGCTCTATGTCATATGCATTACAAGCGGAGATGAACCACTTCCACAGCAACCGCATCTATGACTACAACAGGGTGATGCAGCAGTACCTGGAGGAGCAAGTGAAGTTCTATGAGACgATTGCTGAGAAGCTGAGACACGCTCACAGTCAGTTCACGACCATGTGAAGGAGAGGACTGCACTGAGCCAGGCACTGCTGCACTGACAAGGCCCTCTCTTAAATATCTCCACTCAgattctccctctctttctcacacacttgCTATTGCTTTCTTTTCTGTTCCTCTTTCTTCTTCAGCTCTATGTTTGTCCATGACCTCAGAGCCATAACAAGCTTCTGTTGATCTCAGGCcaaaggcagaaaaaaataccacaaagcctctctctttctttcaacacAAAACCACCCCAGCCATTCTCAAATTAATTACAAAGACACCAGAGATTTTTAGCTTGATCTCACATCTTAATCTCAGGTGTCACACCTGTAAGTGCAATTACCACagactgtgattttaacacgtTTCCGTGAACAGACTTGAAACGAGTTcccaataaaaatgaaaagtgaaaGCTCCTCCCTGATATTATCGGTGTCGAATATGACAATagattttctcttcttttttacatacagggggaaaaaaatcagcAGTTATGAAGGAGGTTAAAAACACAGCTGTGTCTctcaaacaataaacagcagCCACAGCTTGATTGCTTTATCCCCAGTGAAAAGGCAGTAAAAGGCTGGATTGATCATAAAGCCCTGCTAAATCTATGCATCCATCATTTGTTGTGCATTTCCTTAATTCGTTTTAATTGGTTTCACAGAGCCACTTTTAGCCAACCTCATTTGTGTTATTTGCTGTCGTCACTACGGTTCTCCAGTGGGATTTGGTGACGAAAGAAAAGGATGCActtgacagaaagagaaaggggaAGTGAGTATCTTACAATGCTTACTACTGTAccatttttttgtgtgcacACTCATTTGCAATAGCAGAGGCATGGCCTCCCCCACTGTGCCTTTATATGTGTGTGCTGAAGAAGTTCAGCACACTCTCTACGCCGTGCACTTTACATGCAGAACCCTTTTCGTTAGtgtcataacaaaaaaaactatatgcATATCACTTAACAAAGCCGTCTGTCATCTCTGGAGTACATAAAGGAGGGCTGGTCCTTTTTTTCGCACCACAGATCACAtccaaatataatttttaatatatatattttttgttttttctttcaaagCCGAACACATTTTTGCTTCTTTCGCCTGCCGCTAAGCAATGTTTTCTGCTACATTTTCACTTCAGTGCAATCTTCCTTTCTCACgcacttctctctttcttctcacaTTTAGCATATATATTCTTTATCCGATGCATGTGCTTTATTTCTTGATGTATCGTTTTATGTATAGCAATGTTTGCAAGTCATTTGCACCAAGAATGATAAACACAAAAAGTAATTCAGATATGAtttaataaactctgatttgTACTCTA

Function

symbol description
snx9b Predicted to enable phosphatidylinositol binding activity. Predicted to act upstream of or within endocytosis; intracellular protein transport; and mitotic cytokinesis. Predicted to be located in cytoplasmic vesicle membrane. Orthologous to human SNX9 (sorting nexin 9).
snx9 Enables several functions, including 1-phosphatidylinositol binding activity; Arp2/3 complex binding activity; and protein homodimerization activity. Involved in several processes, including cytoskeleton-dependent cytokinesis; plasma membrane tubulation; and positive regulation of cellular protein metabolic process. Located in several cellular components, including cytoplasmic vesicle membrane; cytosol; and trans-Golgi network. Is extrinsic component of cytoplasmic side of plasma membrane. Colocalizes with clathrin-coated vesicle.

NR:

description
sorting nexin-9 isoform X1

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0030659 cytoplasmic vesicle membrane cellular_component
GO:0035091 phosphatidylinositol binding molecular_function

KEGG:

id description
K17923 SNX9_18_33; sorting nexin-9/18/33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253921.3 True 3563 mRNA 0.47 20 55266087 55296450
XM_007253922.3 False 3527 mRNA 0.47 19 55266087 55296450
XM_007253923.3 False 3494 mRNA 0.47 19 55266087 55296450
XM_007253924.3 False 3457 mRNA 0.47 18 55266088 55296450

Neighbor

gene id symbol gene type direction distance location
afdn afdn coding upstream 110638 55011582 ~ 55155449 (+)
igf2r igf2r coding upstream 385697 54845252 ~ 54880390 (+)
tdrd15 NA coding upstream 422092 54827624 ~ 54843995 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding upstream 576335 54665408 ~ 54689752 (+)
LOC103031746 NA coding upstream 810563 54433723 ~ 54455524 (+)
LOC103035140 NA coding downstream 11703 55308153 ~ 55311094 (+)
parp1 parp1,LOC107697162,LOC107678834 coding downstream 110924 55407374 ~ 55425667 (+)
lin9 lin9,LOC107678835,LOC107726751,LOC107697095 coding downstream 135630 55432080 ~ 55442139 (+)
LOC103047723 matn3a,LOC108424436,LOC108257995 coding downstream 170676 55467126 ~ 55481255 (+)
LOC103047102 LOC108424413,LOC108257993 coding downstream 199656 55496106 ~ 55510485 (+)
G28302 NA non-coding upstream 101068 55163794 ~ 55165019 (+)
G28300 NA non-coding upstream 103131 55162490 ~ 55162956 (+)
G28212 dcbld1 non-coding upstream 567722 54695195 ~ 54698365 (+)
G28197 NA non-coding upstream 622659 54595474 ~ 54643428 (+)
G28196 NA non-coding upstream 727624 54537768 ~ 54538463 (+)
G28361 NA non-coding downstream 162543 55458993 ~ 55459300 (+)
G28362 NA non-coding downstream 165625 55462075 ~ 55465285 (+)
LOC111189292 NA non-coding downstream 187056 55483506 ~ 55487476 (+)
G28417 NA non-coding downstream 245799 55542249 ~ 55564694 (+)
G28460 NA non-coding downstream 598174 55894624 ~ 55960470 (+)
G28072 NA other upstream 886781 54378241 ~ 54379306 (+)
trnas-aga_8 NA other upstream 1612357 53653649 ~ 53653730 (+)
trnas-aga_7 NA other upstream 1613149 53652857 ~ 53652938 (+)
trnas-uga_10 NA other upstream 1613498 53652508 ~ 53652589 (+)
trnal-cag_6 NA other upstream 1613870 53652135 ~ 53652217 (+)
LOC103023616 LOC108424481,LOC108257757 other downstream 84154 55380604 ~ 55403330 (+)
LOC103029514 srsf5,srsf5b,LOC103029514,LOC107756601,LOC107602033,LOC107549086,LOC107721313 other downstream 936289 56232739 ~ 56239729 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other downstream 994297 56290747 ~ 56312111 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other downstream 1040706 56337156 ~ 56453934 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other downstream 1399394 56695844 ~ 56706092 (+)

Expression


Co-expression Network