G58649


Basic Information

Item Value
gene id G58649
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14649724 ~ 14652022 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66789
ATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGCAGGCCTCACTGAGCCATCGGATTTAATCAAAAATATCTAATTTCTTTGTTTTTTGTTTTGTTTTAAAATCCATGTCATGACCCCTTTAATATGTCGGGAAAAACATGGGGTGTACTTACGTTTCCACAGCACGATTTATTAACCATCAGCTCATGTTCCTCCTAGTTTACCTTCAAAGAAGCACGTGTAACAAGTAGCTGCTTCAGTTCTGAGTGGGCTGTGACGAAGGCGGAGAGCTTTTGCAAGAATCCCACCTTAAGTCTGTTTGTTCTGCATTTCCACATTTGTGGCATAATAGGGTCCAGAAGGATTTTTGGTTGAGCCTACGATGAGCTCATAAAATCTGGATCCCATCTGACAACAAAAGCCCCCCCAGTTGCATCTAATCTGGGAAGAAGCGAACGTCTACGGCGTGAAAGCAACCATCGCAGATGTGTATGTCTATGACCCTTTAGCAGCTGGACTAATGTTCAGAACGGTTGACCCAGGCCATCTCCTCTAACAGCAGGAAGGATGAACCTTCACTCGTAACACCAACATGTTTGGCTTGTTTAACAGCCTGGCAGTTTCCTTTCCCAGCACTATGAGCGAGCATTAATGAAGTTTCGCTGTAGAACAACAGAAGCAATTCAGGATGGAGGGGGGACGCGACCAGCCTGCCTCTTTCCAAAGCTCTTCCTACGCGCACCACTCAGCTCCATGGCAACTCGCAGCGAGAAGGCCAGAGTGATACAATACGGGACTTTCACTTCCTGTCATAAAAGCCTCAGCGCAGTTTTTTTCATGATCCTTTGTGAAACAATAACAGGCCTGTTTTGGTTTCCACACATATCGCTCAGGGTCATGTCTCATCTGAACCTCCACCGCGAGGAGGTGAGAAAACGACAGTGGAAAGATAACCTTTACTCCATAACAGTTAGAACTGAAAATGAGAAACTCGCTTTCAAAAGCTCCCAGCATGCCTCACACTCGAAAGATGGTCTCTAAAGGCCTTTTCACATGATTCGCATCAACTTGCCCAATACATCGAACTCTATGGAGAGAAGTCCTCAAAAGACTTAAACTCATTTGCCACTGACCTTTTGAAGTGCAGCCGATGATAACAGACCAATTGTGTATTCGATGTGGCTTTGCAATGACAGGTCAAGTTCTGCAACTACAGAGGTTTCTGACTTTCACACAATTTTTCCATGCTAATAATGAATAATTTTAGTTTAAATGTAGTGCACATCCTGAATGTCTCAATTTACATTTATGCATTTATATTTACCTTCATATTTTAACACACAGAGTTTATTTTAATTAATAACTGTAAATTTAAATGAAATTAGCCACAATGTATCAGAAGTTAGATTGGAATTTGAACTGGAATAACAGAAAGAGGAATTTACTGAATTGCAATTCAAAGAAATTCAACACAGGTAATGTACGCGGCTATATCTGCCCATCCATCTGTCTGTCTGTCTATTCATCCATCCATCTATCTGTTTGTCTGTCTGTGTCTGTTCATCAATCCATCCAACCATCCATCCATCCATCCATGTCTGTCTGTCTGTCCGTCCGTCCGTCCGTATTTCTGTCTATCTTTCTATCCGTTTGTCTGTCCATCCATCCATCTATCTATCTATCTATCACAGGTAATGCACGCAGGTATATCTGCCCATCCGTCTGTCTGTCTATTTATCCCTCTGTCTGTCCATCCATCTATCTACCCGTCTGTCTGTCTATCCATCCATTGATCTATCTGTTTGTTTGTCTGTCTGTCTATTCATCCATCCATTAATCTATGTCTGTCCATCCGTCTATATGTCTGTCTATCTTTCTAGCCATCCATCCATCCATCTATCCATCCATCACAGGCAATGCACGCGGGTATATCTGCCCATCCGTCCATCTGTCTGTCTATTTATCCATCTGCCTGTCCATCCATCTATCTATCTATCTATCCATCTGTCTGTCCATCCATCCATCCATCTATCCATCCATCCATGTCTGTCTGTCCATCCATCTGTCTGTCCGTCTTTCCATCCATCCATCCATCTACCTACCTACCTATCTGTCTGTCTCATTTGTTCTTTCTTTTGTTCTTTCATTCATTTCATCTATTTATGTTTCTTTCTAGTATTTTTGAACTTTTAAACAAGGGTTTGTCAAGTCAACATTTAAAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66789 True 2263 TUCP 0.42 2 14649724 14652022

Neighbor

gene id symbol gene type direction distance location
CI01000009_14616605_14620028 NA coding upstream 29486 14615371 ~ 14620238 (+)
CI01000009_14595691_14611767 NA coding upstream 37155 14595436 ~ 14612569 (+)
CI01000009_14581261_14582899 NA coding upstream 66730 14580880 ~ 14582994 (+)
CI01000009_14474300_14474593 NA coding upstream 174954 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 198182 14432716 ~ 14451542 (+)
CI01000009_14659692_14664324 NA coding downstream 7157 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 29632 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 205691 14857713 ~ 14859636 (+)
CI01000009_14862429_14898325 SLC4A3 coding downstream 209710 14861732 ~ 14898549 (+)
CI01000009_14916323_14920716 NA coding downstream 264243 14916265 ~ 14920795 (+)
G58631 NA non-coding upstream 40383 14609006 ~ 14609341 (+)
G58630 NA non-coding upstream 41658 14607086 ~ 14608066 (+)
G58623 NA non-coding upstream 51242 14598267 ~ 14598482 (+)
G58622 NA non-coding upstream 51822 14597589 ~ 14597902 (+)
G58676 NA non-coding downstream 52457 14704479 ~ 14710140 (+)
G58686 NA non-coding downstream 68866 14720888 ~ 14721094 (+)
G58713 NA non-coding downstream 111800 14763822 ~ 14764679 (+)
G58695 NA non-coding downstream 123915 14775937 ~ 14777316 (+)
G58735 NA non-coding downstream 160994 14813016 ~ 14813280 (+)
G58558 NA other upstream 148210 14496936 ~ 14501514 (+)
G58455 NA other upstream 391198 14246695 ~ 14258526 (+)
G58382 NA other upstream 609823 14039757 ~ 14039901 (+)
G58028 NA other upstream 1506116 13140378 ~ 13143608 (+)
G57701 NA other upstream 1626586 13006643 ~ 13023138 (+)
G58711 NA other downstream 114637 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 273207 14924621 ~ 14952571 (+)
G60028 NA other downstream 700025 15352047 ~ 15376169 (+)
CI01000009_15708273_15712002 METTL5 other downstream 1055970 15706460 ~ 15712005 (+)

Expression


Co-expression Network