bach2 (bach2)


Basic Information

Item Value
gene id bach2
gene name bach2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 48909552 ~ 49075894 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254915.3
GCTTCAGTACCAAACACAGGAGACGAGGAGCTGCACGCTGAACGGAATCaccgcgcgcgcgcacacacacacgcacacacgcgcgcgcactCGTAtgcacactcacatacacacactcttgcaCATCAACAGAGAGATTCACAAAAACGCGCGCGCGTGCACGCTGAGGGGTCTTCTGTTCCCAAACTTGACTCTgcgaagagagagatagagagagaaagagtgcagGCTTTGATCTTCCTGCACGAGGAGGCTTTAGAGGAGTCTGCAAGGAAGTCATCATGTGAaagacattgatttttttttgaagCACGCGCACGAACGGGCTGGATTacgagagaaaaacagagggaAGTTGAAGGGTGAGAGCGGTATGTCCGTGGATGAGCAGCCTGAAGCCCCGATGTACGTGTATGAGTCGACGGTGCACTGCACGAACATCCTGCTCGGCCTGAACGAGCAGCGGCAGCAGGGCCTGCTGTGTGATGTCACCGTGCAGGTGGAGGGCAAAGAGTTCCGAGCCCACCGGGCCGTCCTGGCCGCCTGCAGCGAGTACTTCCTCCAAGGCCTGGTCGCTCACGGAGACAAGGAGCTGGTCTTCACCATGCCTGACGAGGTCACTGCCAGGGGCTTCGCTCCATTGTTGCAGTTCGCTTACACGGCCAAGCTGCTGCTCAGCCGTGACAACATCCAGGAAGTGATCCGCTGTGCCGACTTCCTGCGCATGCACAACCTGGAGGACTCCTGCTTCCGCTTCCTGGAGGCGCAGCTGCGGAAAGAGGATGACGGTCCCCTGCTCTCCAACAAGATGGAGCCCGAGCGCAACCACTCAGAGGACCAGGTCATGCAGGCCGAGACACCAGTCGTCAGTGTGGCCTGGGACGATTCGCCGCCATCCTGCAACCGCCCAGACTTTCTGGACGGCAGAGCAGACGTAGGACGGCAAGGCACATCAGACTTGCCACGCTGCCCCAAGTACCGAAAGTACCAGTGGGCCTGCAAGCACAACGACAGCAACGACAACGAGAGCTCCTCAAATACCAGTAGTACCTCAGGTTTCCCAAGCACACTGCTGCCCAGGCCAGCCCTGGCGCAGATCAAGCAGGAGCCACGCAGCGAGGATGAGCCTGTCCTGTCAGGCAACGAGGGCGACGGCAGGGACAAGGATGAATCCGTGGCCGACATGGAGCTGGACAGTGGCAAATCACCCACTTGCCTGCGTGCCCTCTTCAAGCGGAGCTTTCCAGATGCGCCTGATGCTTCACGGCCGCTTCTGGCCGGCCAGCTAGCCTGCACCCAGAGCAAGGTGAGCACTCAGGGAGAGCACAAAAAGGACCACAGGCCGGCCTTTCCCAAAGACTCCAAAGATGGCTTCTCCACAGGCCTGTCGCTGAGGTCGGCATCCTGCGACGGTGTTTGCAAGCAGGAGACGGAGTTGGATCGCCGCAGTGTCATCTTCGCACCTGCCCATTCCTATCCAGGTGGTGGGAACTCGCCGCCAGACAAGGAGCTGCCGCCCGATCACTTGTCTAAGGGCTTGTGGACCGGTGGCAGCCAGTCACTGCCCAGCTCGCAGGCTGCCTACACCACACCCTCGGCCGGTACCCAGGGCGAACCGACGCCAGCGCTCCTACTGTGCCGCCAGAGGCCTAACGCTAGCTGTCCTGTGCCCATTAAGGTGTGCCCACGTTCGCCACCCTCGGAGACCCGCACACGCACCTCCAGCTCCTGCTCTTCCTACTCGTATGCTGAAGATGGAAGCGGTGGCTCGCCCTGCAGCCTGCCCCAGTTCGAATTCTCCTCGTCGCCCTGCTCCAGCGTGAGCCGCTGCCTGCCTGCTGACCCACAGGAGTCCGGCACGGGTGCAGATGCTCCACTCTTCGGTGCTGCAAGACCCAAGATCAAGTGTGAACGGGCGTATGGCACGAACTCCAGCGATGAGTCTGGTTCGTTCTCAGAAGGAGACAGCGAGTCTTGTCATGTACAGGAGCAAGGACCGGAAATCAAGCTTCCATTCCCTGTCGATCAAATCACGAATCTTCCACGGAACGACTTCCAGATGATGGTGAAGATGCACAAGCTGACCTCAGAGCAGCTGGAGTTCATCCATGATGTGCGGCGGCGCAGCAAGAACCGCATCGCCGCCCAGCGCTGCCGGAAGAGGAAGCTGGACTGCATCCTCAACCTGGAGTGCGAGATACGCAAGCTGgtgtgtgaGAAGGAGAAGCTGCTGACGGAGAGGAATCAGCTGAAGGCGTGTATGGGGGAGCTATGGGAGAACTTCTCCTGCCTGTCCCAGGAGGTGTGTCGGGACGTCCAGCTGAGTCCAGAGCAGGTCCAGTCCCTCCACCACTACTGCCCCGTTGCCCGTCCCGGCAaccccacctcctccacctcccccAGCAACCAGGCCCCTCCCACCGCCAGCATCGACCTCACCACCCACTCGGGAGCGGCCACGCCCGAACCGGACGGCCGGTGGGGCACGGGTAACGGAGTGGAGCACACGGGCAACTGCGAGCGGGACGGGACGAAGGCCGGCGGCTCCTCCTCCTACCTGGAGGCGGGGCTTTCGCTGGAACAGTCAAATCAGACGGTGACAGTAGACTTCTGCCAGGAAATGACAGATAAATGTACCACTGACGAACAGCCGAGGAAGGACTGTACCTAATGATGGTGGTCTCTCcacttttgtctgtttgttttttatattattttttattattttctttttgtttgtttgttttttttgtttttaattatttaatttagataCGTCTTCTGACAAACCCTCAGAATTCGAGGGCTGTTGAGATGGTCAGCCTCTGCCAGTGTtctatgaatatttttatttgtttttttatatatatatttatgtcttTTGTCGTCTTTTTTTACGGTTGACACTACAGTTGTCTTAACAGCAGCAATACTGTTACTCCAGGTTCTCTCCAGCTCGCTCCTTGGCAGAGTGGCCGAAGCGTCTCCCAGAACTCTTTCGCGATGGTGCTAAACCTTCCCCTCACTGACCTCTGCAGTGTAAACGCTGTCTTCTGTGTATTACAGTCCACTCAAAGGGGATGGGTTTCTGACCACATCTCACATTCAAACCTCCACGGACCTagcagcagctctctctctctctctgtctctctctgtttcattctatctgtctgtctctatctctaccCTTTCACTCTTTCCCTTCTCTTAATCTCTGCCTCTGCCTGTCCTATCAAAATCAGcagtgttaaattaaagcaataCACCAACATTATTCAACCCAAGaacaataatagtaaaaaatatatgttctaTAATTATCtaaattaacacattaataaataatgtgtgaatgaatctttatctttatcataTGTTTAAAAGACTTTACTGTACTTCTAGTAAAATAACATAACTCCTGCATTGAAACACATTTATGTAATatgcataaaaagaaaaaaaaacttttaccaTCCCCATTCTTACCCACTGATGTTTACATTTTAGACCACAATGATTCAGTTTATGTAAAATGATCCAATTTGTATTTTACAGCAGTGGAATATAGATGTAAACACAACAAAGGAGATTTTAACAATTGAAACTAGCCTGAGCCCCCAAAAAATAAACAGCTGAAAATGAAAACCAGCATCAGTAGATATGATTTGTTTTATGTTCTGTTGTTTTACTAAGTATTGGGTGCTGCGTTAAAATGGCCTTCTACATTAATTGACCAAATAATACAGATGCAGATTAATCCAGATTCAGattatgttgtaaaaaaaaaatgaggtgtGCTTGTAACTGGTTTCACTGTGTAGTTCCATAAAAAAGATCCACTTAAAATACACAGTGATAATTTAACACTGTCTGATTTTTGCagattatctctctctctctctctctttctctctcttttattcttctttatctatatctctctctttgtggCCCTTGTCACAGCAAATTCAAACTCAGGAAATATTCTGAATGTTCGATATATAGAAactcatgaaaaaaataaggatACATGAaagattcttcttttttttttttacaacagctAGACTGTAAATGTTCATATGCAAAAAAAGTTATGTCTTCTGTGTTACACATTTGTAGTGTCTCCACAACACTTAATTTGTACAGACGGTTGTATCAACGacgacaacaaaaaaaatacattcctCTATTGCCTTCTACAGCACTGAAACGAAAGAACGAACGACTCAGAAAATCGAAGAGGATCGGAATTGTAGACTTTTGAGTAACCCCCTCCTGACCCCGCCCCCTTACCCCCCTCACATCAGCAATACCCCTGCGTTCagatgtttctttgttttttgatgGTTTTGTATAAAGAGTGCTTGCCGggcagaatgtgtgtgtgtatatagtacAGAGCATGGCGAGTGTATCGGTAATCTTGTACAGGTAGTGCGTTACTTGTGTTCCCTTTTCTCTGGGCTTGTTTTTGTTgcaccttttgtttttttgttgttttttttgcgaGAAGAAGAGAATAGTTTGCTTTGCTGTTTCCTGTCTGAAGTGAATTGCCATGGCAGTGGGTGTCCTAAAAAAAACTCAGGAAACTagcttattacacacacatatacacaaacatacatgaCATACACTCTTTCACATATAAAAAACAAGCCCCTTTGCATGCCATTTGGACTTAAACGTGCTCCGGGCTCATTGGTGCCCttcagaaatgtgaaaaaggcCCGCCTCCTCGCGTTATTGGAGGGAATTTTCTTCCTAGTCAGTATTTAAAGACGTTatggtgtgtgtgcgcgtgtaaGTGAATCATTGTTTCAGtgttatgtttttaaaacatcacagaaaaaaagacaaaaaagctTGCCGCCTTTTTAAATGGAGAAGAAGGTGGCAACTCAGGAATAGGAAACGATGAGCTCTGTTTAAGGACACTTCCTGACCCCATGTTTGATCCCGGCACTTATTTTTTCCAGCCCTGAGGTCACTGAGGTCAACCAGGCCAGAGTGCAGCTCTTTTACATAAGCATtagggttttgtttttttatttgatttaattcaatAGAATCTGAAGAAAATATTTCAGGGATTTCTGAAATTTCAGCTATTATTTGCAGATTAGTgaattaaaagtgattttttatctatttttggatttaaaaaaaat

Function

symbol description
bach2 Enables sequence-specific double-stranded DNA binding activity. Involved in primary adaptive immune response involving T cells and B cells. Located in cytosol and nucleoplasm. Implicated in immunodeficiency 60.

NR:

description
PREDICTED: transcription regulator protein BACH2

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG:

id description
K09042 BACH; transcription regulator BACH

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254915.3 True 5177 mRNA 0.49 6 48909552 49075894

Neighbor

gene id symbol gene type direction distance location
mdn1 mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 coding downstream 57907 48746900 ~ 48851645 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 coding downstream 174182 48723000 ~ 48735370 (-)
ppil4 ppil4 coding downstream 332959 48562504 ~ 48576593 (-)
cdk19 cdk19 coding downstream 370170 48445377 ~ 48539382 (-)
slc35f1 slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 coding downstream 463186 48325885 ~ 48446366 (-)
map3k7 map3k7 coding upstream 44068 49119962 ~ 49147483 (-)
LOC111191920 NA coding upstream 359018 49434912 ~ 49435653 (-)
epha7 epha7 coding upstream 732200 49808094 ~ 49941006 (-)
LOC103033334 NA coding upstream 1497866 50573760 ~ 50580682 (-)
map3k5 map3k5,LOC107653159,LOC107660504 coding upstream 1506453 50582347 ~ 50703118 (-)
G27139 NA non-coding downstream 32073 48858475 ~ 48877479 (-)
G27136 NA non-coding downstream 37088 48854665 ~ 48872464 (-)
G27081 NA non-coding downstream 164208 48745061 ~ 48745344 (-)
G27035 LOC108427529 non-coding downstream 215128 48586047 ~ 48694424 (-)
G27062 NA non-coding downstream 232712 48675753 ~ 48676840 (-)
G27219 NA non-coding upstream 145892 49221786 ~ 49224322 (-)
G27228 NA non-coding upstream 241558 49317452 ~ 49321378 (-)
G27234 NA non-coding upstream 313957 49389851 ~ 49393820 (-)
G27237 NA non-coding upstream 356781 49432675 ~ 49433839 (-)
G27240 NA non-coding upstream 385603 49461497 ~ 49461916 (-)
G27145 NA other downstream 18524 48886994 ~ 48891028 (-)
LOC103039734 LOC108424428 other downstream 584890 48217506 ~ 48324662 (-)
pln NA other downstream 620816 48278262 ~ 48288736 (-)
G26754 NA other downstream 2170816 46704347 ~ 46738736 (-)
fkbp3 fkbp3 other downstream 2373717 46533695 ~ 46535835 (-)
G27258 NA other upstream 562865 49638759 ~ 49639444 (-)
G27400 NA other upstream 1405995 50481889 ~ 50531639 (-)
LOC103034285 NA other upstream 1447005 50522899 ~ 50539672 (-)
pcmt1 pcmt1 other upstream 1649169 50725063 ~ 50740434 (-)
LOC103040973 NA other upstream 3217986 52293880 ~ 52321920 (-)

Expression


Co-expression Network