esco2


Basic Information

Item Value
gene id esco2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 34670238 ~ 34675942 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255412.3
TCTTCCGCTCTGAGTGCGGCTCTTTTCCGCGCGGACTCCTCGCCTTTGGCGCGCTGTTCAAAACCCGACCCCGCcgacactcactcacacacccgccgcacagagacacagagagaggacACAGCGCGCAGCTCAGCTCTCAGCTCTGAGAGGAACAGTGTGATATCAGCCCTGAGGAGAACACAGGTGACATGAAAATGTCAAACTGCACAACAAGGAAAAGAAAACACCCTTCTCCAGATTCTGGAAGTAATCCAGCAAAGAAGAAAATCTTGAGACAGGACGATTACCCAAGGAGAATGTCCCAACGGCATAAGGAGAATTGCCCGTCTCCACTAAAATCTCCAAAAAGTAGGGGTGCTCTCTCACAATCCCCACGCACacctaaaaagatgcagagggCTTATGCATTGGAATCCCCACCTAAAAAAGCCTCACCACTGAAAGCAACAGTGGTAGCAGGAACCTTTTACAgcaaacagaagccactgtatCTGACGCCTCTTGAAAGAAAGCAATTGAATGAGGCAAAATCGCCTCCACTGAAAACCAACAAAGATCTGTCCAATCTTTCTGTTCCTGAAGCAAAGCCAATCAAGACTAACAAGCGTGGAAAAAAGGCTACTGTAAATGTTCAGAAGTCAAATTTAAAAGGCTATTTtccaaccaagctgaactgcagcgCTTCCTCCAACCCAGATTCAGCCTTGAAGGTGGTGGAGATGAAGAAACCAGCCTCCCTTTCGTTCAGCAGTTTAAAATCCAAAAACAAGCCCAGGATTGTTGTGGGTGCTGCTTTCTTTGGTACTGGTAAAAAGCCCACTTCTATGTATAAGGCACATGTACAGAAGCCAAGGCCCAAACAGCCTGCAAGCTTACAGAAACCTACCTCGGAGAAACCTACAATGGAGAAAGAAGTGCCTGCAGCACCACAGGACCGATCTCCAGTGCGCAAGGCTGTTTTCATCAGTAAGCCAAAGCCAAATAGCCAGGTGTCATCAAACAGTGCTGCTCATGTTGCTGCCAAGTGTACCGAACCTGCAAAATTGAGTCCTCAGCCACAGAGCCCTTCAGGCATTACCAAGGAATTAAGAGTCGTTCTGAGGAAATCTGTGTCTCCTATTAAATCCAGCACTTCGAATGAAAACATACAGaaTTCACCCACAAAGTCTGGTTCTGACAGTTTGTTAGACCTCAGTGAAATTACCCCTTCAAGCCATGACAGCTGTTCAGATAATGAATCTTCAGCTGTATACCCAATTTTTGGTTCCAGAAGGTCTCAGAAGAAAGGTTTTCAGTCTAACCCCCTGAACTGCAGCACTCCGTCTGCCCTCAATGGCACATCATCTCTTGTGGCCAAAGAGAGGAGTGCCAGGCGAAAGAAGGActtgaaaaaacaaaatgatgatGATCAGTTGATCATTGATGCTGGCCAGAAGCAGTTTGGGGCCACCACATGCGAAGCCTGTGGAATGCTGTACAGTGTGGACAGTCCAGAGGACAATTTCCAGCACACACAGTTCCACCAGCGCTTTTTGGACACCATCAAGTTTGTGGGCTGGAAGAAGGAGAGAGGTATGGCAGAATTCTGGGATGGAAAAATCATTTTGGTCCTTCCTGATGATCCTAAATATGCAACTAAGAAGGCAGAGGATGTGAGGCGCATTGCTGATACAGAGCTGGGCTTTCAGCAGGTTAGCCTTAGCAGTCCAAAGGCTGCCAAAACCTATTTATTCATCAACAGTGACAGAATGGTGGTTGGCTGTGTGGTTGCTGAGCCTGTGAGACAGgCCTTCAGGGTCCTAGAGCAACCAGAGAAGCCAAAAGATATGACCAAAGAAGACTTCATGGAGCGACACAGAGCCTGGTGCTGCTCCACTGTCCCAGAGAAAGCTATTTGTGGAATTAGCCGTATCTGGGTCTTCAGCATGATGAGGAGAAAGGGCATTGCTACACGCATGTTAGACACAGTCaggaaTTCGTTCATGTATGGAAGTCACCTGACCAAGGATGAAATTGCTTTCTCTGATCCCACCCCGGATGGCAAGCTCTTTGCAACAAAGTATTGTGGCACACCAACTTTCTTGGTGTACAACTTCTTAGGCTGACTGGCATAGTCTGTTTTACAACTGATGTATTCTATCAGCatgttctatatatatatttgacttAAGTGTTTTGCTGCTGGTCCATTTTTCctttactgcttttttaaactattaaattCATACAAGCTGTTTTCCCCTTATCCATTAAGTATGTTCATGCTTGCAACAAATTACTGTGGTTTTGTTTGCAAAACAGTCTGTGTTATCTGTCAGTTTTTTTGACAGTGAAGTTGCTAAATTTTAATTGCGTACAGAATAGGTTTTATGGTTCCAAAATGATTTATACCTAAATGTGTTGTAATTATTCAAATAACATTGCTGAAGTGAGTGATTTAtaagctaatgttaattacacAATTTTCTAATTCTGACATGTTCATGTAGTTTGATGTTAAtggtaaagataaaaaatgaaagcacCTGTTTCAGAAGTAACTGTCAGCCTGAACGATGAAAGCTTTTCccttgtaaatattttaaataaaagttgctGCTAAGCATGTTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0007507 heart development biological_process
GO:0006275 regulation of DNA replication biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0000785 chromatin cellular_component
GO:0016740 transferase activity molecular_function

KEGG:

id description
K11268 ESCO, ECO1; N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255412.3 True 2613 mRNA 0.44 11 34670238 34675942

Neighbor

gene id symbol gene type direction distance location
scara3 scara3 coding upstream 44643 34597882 ~ 34625595 (+)
reps1 reps1,LOC107727647 coding upstream 99486 34552343 ~ 34570752 (+)
papola papola,LOC107560206,LOC107747941,LOC107678672 coding upstream 368571 34285824 ~ 34301667 (+)
LOC103028909 NA coding upstream 385654 34277101 ~ 34284584 (+)
LOC103028593 LOC108258153,LOC108426258,LOC108444014,LOC107751776 coding upstream 400538 34262996 ~ 34269700 (+)
hddc2 hddc2,LOC107580122 coding downstream 140925 34816867 ~ 34820320 (+)
serinc1 serinc1,LOC107675227,LOC107598085,LOC107727646,LOC107675084 coding downstream 772700 35448642 ~ 35460339 (+)
gab3 gab3,LOC107557096 coding downstream 962405 35638347 ~ 35676321 (+)
LOC103040467 LOC108444278 coding downstream 1131525 35807467 ~ 35810107 (+)
zc3h12b zc3h12b,LOC107557112,LOC107741193,LOC107597257,LOC107672716 coding downstream 1147254 35823196 ~ 35850191 (+)
G23684 ccdc25,LOC107598073,LOC107675065 non-coding upstream 3207 34663064 ~ 34667031 (+)
G23499 NA non-coding upstream 383343 34247837 ~ 34286895 (+)
G23462 NA non-coding upstream 622464 34046590 ~ 34047774 (+)
G23427 NA non-coding upstream 782369 33885462 ~ 33887869 (+)
G23367 nkx2-4 non-coding upstream 1015249 33650637 ~ 33654989 (+)
G23683 pbk,LOC107717112,LOC107598104,LOC107676230,LOC107727585 non-coding downstream 76 34676018 ~ 34679797 (+)
LOC111196008 NA non-coding downstream 152894 34828836 ~ 34830350 (+)
G23719 NA non-coding downstream 201351 34877293 ~ 34878980 (+)
G23727 NA non-coding downstream 241359 34917301 ~ 34917569 (+)
G23729 NA non-coding downstream 244931 34920873 ~ 34968242 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 705730 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 890335 33777942 ~ 33779903 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other upstream 1074527 33587529 ~ 33595711 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 1500846 33083642 ~ 33169392 (+)
LOC103037425 LOC108426312 other upstream 1588376 33076624 ~ 33081862 (+)
trdn NA other downstream 550856 35226798 ~ 35302347 (+)
LOC103040783 LOC108411309 other downstream 1367489 36043431 ~ 36096726 (+)
ar ar,LOC108443198 other downstream 1573882 36249824 ~ 36458929 (+)
LOC111194342 NA other downstream 2913164 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 3252413 37928355 ~ 37933989 (+)

Expression


Co-expression Network