LOC103029743 (zdhhc14,LOC108444016,LOC107747944,LOC107679689,LOC107742328,LOC107560202,LOC108258056)


Basic Information

Item Value
gene id LOC103029743
gene name zdhhc14,LOC108444016,LOC107747944,LOC107679689,LOC107742328,LOC107560202,LOC108258056
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 34206343 ~ 34245118 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255428.3
CTGTATGGGTAGCGAACTGGGCTGTGGGCTAGTGTGTGGCGGGGGTAGTGTtctcacactcagacacacaagCAAGCACGCGCGTGCGTTACGTTAGCTACGTTACGTTACCAAGCCCCCACAGTGCTGGAGAAGGTGCCGATCTGCTCGGTTCTCCCGGCTCTTTTTGCTGTGTGGATAAATCACGGGGCTCTGCGCGGATCTTCGCAGCCAGTGGAGCTTTTGTGAGAGGGGGATACAGCAttcagtagagagagagagagagcgggggaGCGAGGACACCAGAAGGACGGGCTTCCtcctgtttctgctgctgctggagataTAACCCAGCGCTACACTGAGCGGAGCGGATGGCGGGGGGACATTTCTACACACCCACCCAGCCGAGCAGCCCGGAGAGGAAAGAGGGCTAATCACAGCCAGCCGAGCTCCTCCAGACACTCCAGCTCCTCCGCCCGAGCTCGCTCTCCGTCTGTTTACACCCTGCTGGAATTAAAACACTGTGGAGGAATATTGTAGCAGGAGCTCTGCTCAGCCTCCTGCGGATCTCCTCTCGTGACCATGCCTCCTCGTGTGCCTGCATGCACTGGATGCAACTGGGTGGCTGCATGTGCCAGCAGCAGTCTGCACTGAGCTCCACTGAATACAGCTGCAGTTGGATTTCTAAAGAAAGAGGCCACAGCTGAGTGATaaacatcaccatcaccactaccaccaccaacacctccacctccaacatgcatcttggaataGATGAGCCCAGGGAATGTCAGTACAATCAGATCTGCACTCACAACTCCTCGCCCATGGAGACTCCACACAGCAAGAAGAGGAAAGTCAAGAGAAAGTGGCAGATTTTCCCTGGCCGGAACAAGTTTTACTGCAATGGACGGATCATGATGGCCAAGCAGACTGGGGTGTTCTACCTCACCATTGTGCTGATTCTGGTCACCAGCGGGCTTTTCTTCGCCTTTGACTGCCCATTCCTGGCCTCGAATCTGACTCCTGCCATCCCAGCCATCGGCGGAGTGCTGTTCCTGTTTGTCATTGGAATGCTCCTCCGGGCCAGTTTCAGCGACCCAGGTGTGCTGCCCAGAGCCACTCCAGAGGAAGCAGCTGATGTGGAGAGACAAATAGATGCTGCTAATGGAGCAGGTGGTCCAGGCTACCGGCCCCCTCCACGGACTAGAGAGGTGGTCATCAACGGTCAGACAGTCAAGCTGAAGTATTGCTTCACCTGCAAAATCTTCAGACCGCCCCGGGCATCACACTGCAGCCTGTGTGACAACTGTGTGGAGCGCTTTGACCACCACTGCCCCTGGGTGGGCAACTGCGTGGGAAAACGAAACTATCGCTTCTTCTACCTGTTCatcctctccctctccttccTTACCATCTTCATCTTCGCTTTTGTCATCACCCACGTCATCCTGAGATCCAACCGGACTGGATTCCTGAGCGCCCTCAAAGACAGCCCAGCCAGTGTTCTGGaggttgtggtgtgttttttctctgtctggTCCATCGTGGGTTTGTCGGGTTTTCACACCTACCTGATCAGCTCCAACCAGACAACTAATGAAGACATCAAAGGGTCGTGGTCAACCAAACGAGGAAAAGACAACTACAACCCCTACAGCTATGGCAATATCCTCACCAACTGCTGCGCTGCCCTGTGTGGACCTCTACCACCCAGTTTGATTGACAGAAGAGGATTTGTACAGCCAGACACCCCTCAGCCTGCAGCTCAGTCCAACGGCACCAACACATGTCCAACAACTCAGCTCCAGAGTCATATGTGTCACCAAGATCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCTGTTACGACGCCCCTGCTGCATGCTCAGCCTATTCTGCTGGGTGGAGGTCCTGTCCTGCAGCCCAAGCCGTCGGTAGGGGGTCCCTGTTCTGCCCTGGGTCCCGGGCAGCCCTCTCTGCCCTCCTCAATCCCAGGCCTGAGCTGCGGAGGAGAGGTTTTGGCTCTACACGACTCGGAAAACCACTGTcaccatcacctccaccaccagCACTTCATCAGCCCAGAGGAGACGCCCTGCACTGCCCATTTGGGTCACCACATGCCCCTGTATGACCCAGCCAGCCAGGACTCGCTCCATGAGGACTCTGTGCGCGGGCTGGTCAAGCTCAGCTCCGTCTGA
>XM_022684788.1
atgcatcttggaataGATGAGCCCAGGGAATGTCAGTACAATCAGATCTGCACTCACAACTCCTCGCCCATGGAGACTCCACACAGCAAGAAGAGGAAAGTCAAGAGAAAGTGGCAGATTTTCCCTGGCCGGAACAAGTTTTACTGCAATGGACGGATCATGATGGCCAAGCAGACTGGGGTGTTCTACCTCACCATTGTGCTGATTCTGGTCACCAGCGGGCTTTTCTTCGCCTTTGACTGCCCATTCCTGGCCTCGAATCTGACTCCTGCCATCCCAGCCATCGGCGGAGTGCTGTTCCTGTTTGTCATTGGAATGCTCCTCCGGGCCAGTTTCAGCGACCCAGGTGTGCTGCCCAGAGCCACTCCAGAGGAAGCAGCTGATGTGGAGAGACAAATAGATGCTGCTAATGGAGCAGGTGGTCCAGGCTACCGGCCCCCTCCACGGACTAGAGAGGTGGTCATCAACGGTCAGACAGTCAAGCTGAAGTATTGCTTCACCTGCAAAATCTTCAGACCGCCCCGGGCATCACACTGCAGCCTGTGTGACAACTGTGTGGAGCGCTTTGACCACCACTGCCCCTGGGTGGGCAACTGCGTGGGAAAACGAAACTATCGCTTCTTCTACCTGTTCatcctctccctctccttccTTACCATCTTCATCTTCGCTTTTGTCATCACCCACGTCATCCTGAGATCCAACCGGACTGGATTCCTGAGCGCCCTCAAAGACAGCCCAGCCAGTGTTCTGGaggttgtggtgtgttttttctctgtctggTCCATCGTGGGTTTGTCGGGTTTTCACACCTACCTGATCAGCTCCAACCAGACAACTAATGAAGACATCAAAGGGTCGTGGTCAACCAAACGAGGAAAAGACAACTACAACCCCTACAGCTATGGCAATATCCTCACCAACTGCTGCGCTGCCCTGTGTGGACCTCTACCACCCAGTTTGATTGACAGAAGAGGATTTGTACAGCCAGACACCCCTCAGCCTGCAGCTCAGTCCAACGGCACCAACACATGTCCAACAACTCAGCTCCAGAGTCATATGTGTCACCAAGATCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCTGTTACGACGCCCCTGCTGCATGCTCAGCCTATTCTGCTGGGTGGAGGTCCTGTCCTGCAGCCCAAGCCGTCGGTAGGGGGTCCCTGTTCTGCCCTGGGTCCCGGGCAGCCCTCTCTGCCCTCCTCAATCCCAGGCCTGAGCTGCGGAGGAGAGGTTTTGGCTCTACACGACTCGGAAAACCACTGTcaccatcacctccaccaccagCACTTCATCAGCCCAGAGGAGACGCCCTGCACTGCCCATTTGGGTCACCACATGCCCCTGTATGACCCAGCCAGCCAGGACTCGCTCCATGAGGACTCTGTGCGCGGGCTGGTCAAGCTCAGCTCCGTCTGAGGACTGCTGCTATTGGTCAGCTCGAATGGACAGAGGAAGGCCCTAAAAGCCACAAGCAGCCTGGTGGGGTTTGGAAGCCATACTTACTTTTTGGTGCGTGCGATACACTGGCCCTTACTATTCACCCATCATTGGCCCAATACTTGAATTTCAGCCATTAATTATAGCCAATAGTTTTAACACCTCAAAATTTCAGTTTACGACCTTCAAAATCACTAGTCTGACTAATCCTTTGAAAATCTTGTACCATGGTCTGTACAAAAAGACCAGggactagtatcatgtcccatgacctTTGCCACATTCACTGCaggatgtgtgtatgtgtgtgtggcgcTACTGATAATTACAAAGCActgcactaggggtgggcgatatggctctaaaataatatcacgatatttcagggtatttttgcgataacgatatacttggcgatataggagaACTAAAATA
>XM_022684795.1
atgcatcttggaataGATGAGCCCAGGGAATGTCAGTACAATCAGATCTGCACTCACAACTCCTCGCCCATGGAGACTCCACACAGCAAGAAGAGGAAAGTCAAGAGAAAGTGGCAGATTTTCCCTGGCCGGAACAAGTTTTACTGCAATGGACGGATCATGATGGCCAAGCAGACTGGGGTGTTCTACCTCACCATTGTGCTGATTCTGGTCACCAGCGGGCTTTTCTTCGCCTTTGACTGCCCATTCCTGGCCTCGAATCTGACTCCTGCCATCCCAGCCATCGGCGGAGTGCTGTTCCTGTTTGTCATTGGAATGCTCCTCCGGGCCAGTTTCAGCGACCCAGGTGTGCTGCCCAGAGCCACTCCAGAGGAAGCAGCTGATGTGGAGAGACAAATAGATGCTGCTAATGGAGCAGGTGGTCCAGGCTACCGGCCCCCTCCACGGACTAGAGAGGTGGTCATCAACGGTCAGACAGTCAAGCTGAAGTATTGCTTCACCTGCAAAATCTTCAGACCGCCCCGGGCATCACACTGCAGCCTGTGTGACAACTGTGTGGAGCGCTTTGACCACCACTGCCCCTGGGTGGGCAACTGCGTGGGAAAACGAAACTATCGCTTCTTCTACCTGTTCatcctctccctctccttccTTACCATCTTCATCTTCGCTTTTGTCATCACCCACGTCATCCTGAGATCCAACCGGACTGGATTCCTGAGCGCCCTCAAAGACAGCCCAGCCAGTGTTCTGGaggttgtggtgtgttttttctctgtctggTCCATCGTGGGTTTGTCGGGTTTTCACACCTACCTGATCAGCTCCAACCAGACAACTAATGAAGACATCAAAGGGTCGTGGTCAACCAAACGAGGAAAAGACAACTACAACCCCTACAGCTATGGCAATATCCTCACCAACTGCTGCGCTGCCCTGTGTGGACCTCTACCACCCAGTTTGATTGACAGAAGAGGATTTGTACAGCCAGACACCCCTCAGCCTGCAGCTCAGTCCAACGGCACCAACACATGTCCAACAACTCAGCTCCAGAGTCATATGGCTGCTGTTACGACGCCCCTGCTGCATGCTCAGCCTATTCTGCTGGGTGGAGGTCCTGTCCTGCAGCCCAAGCCGTCGGTAGGGGGTCCCTGTTCTGCCCTGGGTCCCGGGCAGCCCTCTCTGCCCTCCTCAATCCCAGGCCTGAGCTGCGGAGGAGAGGTTTTGGCTCTACACGACTCGGAAAACCACTGTcaccatcacctccaccaccagCACTTCATCAGCCCAGAGGAGACGCCCTGCACTGCCCATTTGGGTCACCACATGCCCCTGTATGACCCAGCCAGCCAGGACTCGCTCCATGAGGACTCTGTGCGCGGGCTGGTCAAGCTCAGCTCCGTCTGAGGACTGCTGCTATTGGTCAGCTCGAATGGACAGAGGAAGGCCCTAAAAGCCACAAGCAGCCTGGTGGGGTTTGGAAGCCATACTTACTTTTTGGTGCGTGCGATACACTGGCCCTTACTATTCACCCATCATTGGCCCAATACTTGAATTTCAGCCATTAATTATAGCCAATAGTTTTAACACCTCAAAATTTCAGTTTACGACCTTCAAAATCACTAGTCTGACTAATCCTTTGAAAATCTTGTACCATGGTCTGTACAAAAAGACCAGggactagtatcatgtcccatgacctTTGCCACATTCACTGCaggatgtgtgtatgtgtgtgtggcgcTACTGATAATTACAAAGCActgcactaggggtgggcgatatggctctaaaataatatcacgatatttcagggtatttttgcgataacgatatacttggcgatataggagaACTAAAATA

Function

symbol description
zdhhc14 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC14 (zinc finger DHHC-type palmitoyltransferase 14).

NR:

description
PREDICTED: probable palmitoyltransferase ZDHHC14

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K16675 ZDHHC9_14_18; palmitoyltransferase ZDHHC9/14/18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255428.3 True 2192 mRNA 0.56 10 34206343 34244662
XM_022684788.1 False 1908 mRNA 0.52 9 34207259 34245118
XM_022684795.1 False 1863 mRNA 0.52 9 34207259 34245118

Neighbor

gene id symbol gene type direction distance location
LOC103034505 LOC108444017 coding upstream 13308 34096489 ~ 34193035 (+)
LOC103030598 cldn20,LOC103030598,LOC107679670,LOC105017817 coding upstream 137016 34051253 ~ 34069327 (+)
LOC103030910 LOC108444009 coding upstream 159958 33983194 ~ 34046385 (+)
ndufaf7 ndufaf7 coding upstream 407569 33789582 ~ 33798774 (+)
pax1 pax1,LOC103035152,LOC107564482,LOC107548404 coding upstream 524507 33676075 ~ 33681836 (+)
LOC103028593 LOC108258153,LOC108426258,LOC108444014,LOC107751776 coding downstream 17878 34262996 ~ 34269700 (+)
LOC103028909 NA coding downstream 31983 34277101 ~ 34284584 (+)
papola papola,LOC107560206,LOC107747941,LOC107678672 coding downstream 40706 34285824 ~ 34301667 (+)
reps1 reps1,LOC107727647 coding downstream 307225 34552343 ~ 34570752 (+)
scara3 scara3 coding downstream 352764 34597882 ~ 34625595 (+)
G23462 NA non-coding upstream 158569 34046590 ~ 34047774 (+)
G23427 NA non-coding upstream 318474 33885462 ~ 33887869 (+)
G23367 nkx2-4 non-coding upstream 551354 33650637 ~ 33654989 (+)
G23356 NA non-coding upstream 626821 33579267 ~ 33579522 (+)
G23349 NA non-coding upstream 637401 33568394 ~ 33568942 (+)
G23499 NA non-coding downstream 2719 34247837 ~ 34286895 (+)
G23684 ccdc25,LOC107598073,LOC107675065 non-coding downstream 417946 34663064 ~ 34667031 (+)
G23683 pbk,LOC107717112,LOC107598104,LOC107676230,LOC107727585 non-coding downstream 430900 34676018 ~ 34679797 (+)
LOC111196008 NA non-coding downstream 583718 34828836 ~ 34830350 (+)
G23719 NA non-coding downstream 632175 34877293 ~ 34878980 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 241835 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 426440 33777942 ~ 33779903 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other upstream 610632 33587529 ~ 33595711 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 1036951 33083642 ~ 33169392 (+)
LOC103037425 LOC108426312 other upstream 1124481 33076624 ~ 33081862 (+)
trdn NA other downstream 981680 35226798 ~ 35302347 (+)
LOC103040783 LOC108411309 other downstream 1798313 36043431 ~ 36096726 (+)
ar ar,LOC108443198 other downstream 2004706 36249824 ~ 36458929 (+)
LOC111194342 NA other downstream 3343988 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 3683237 37928355 ~ 37933989 (+)

Expression


Co-expression Network