naa20 (naa20)


Basic Information

Item Value
gene id naa20
gene name naa20
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 33431923 ~ 33436804 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255442.3
CCTCTCTCTGCAGAGCTTCAGTTTAATGTGAGGGACGGAGGATCTCCAGGCTACAACCGACTGAGGCTGAGTTACAGAAACAGCGAAGACAATGACAACATTACGGGCTTTTAACTGCGACGACCTGTTCAAATTTAACAACATaaaCTTGGACCCTCTAACAGAGACTTATGGAATTCCCTTTTACTTGCAGTATCTGGCACATTGGCCAGAGTATTTCATCgtggcagaagctccaggtggAGAGCTGATGGGTTACATCATGGGAAAGGCTGAAGGCTCAGTTGCGAGGGAAGAGTGGCACGGCCATGTTACTGCACTCTCCGTGGCTCCTGAGTTTAGACGACTGGGGCTCGCTGCCAAGCTCATGGAAATGCTGGAGGAAATCTCAGAAAGGAAAGGAGGATTCTTTGTTGATCTTTTTGTCCGGGTGTCCAATCAAGTTGCTGTAAACATGTACAAACAGCTGGGCTACAGCGTCTACAGAACTGTAATAGAATACTACTCAGCAAGCAACGGAGAACCAGATGAAGATGCCTATGATATGAGGAAAGCATTATccagagatacagagaagaaGTCCATAATTCCACTGCCACATCCTGTCAGACCAGAGGATATAGAATAACACTGAACAGTGGCTCTCTGACTCCCCCTGCACCCCATATTGGGAGAATAAAGCTGCAGGTTGTCATTCTTGCCTACAATGTTTCAGATGGAGCttaaggtttattttttttgtaaattaaatttGTCAGAGGGTCACTGCTTTGTTAATCTTATTTAAACTGAACTCTGCTTGTTCTACCCTTCCCATGTCTGTAACTGCAGGATATATTCAcgttttttaaagttattaaaagaTATTGACAAAA

Function

symbol description
naa20 Predicted to enable peptide alpha-N-acetyltransferase activity. Predicted to be involved in N-terminal peptidyl-methionine acetylation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of NatB complex. Orthologous to human NAA20 (N-alpha-acetyltransferase 20, NatB catalytic subunit).

NR:

description
PREDICTED: N-alpha-acetyltransferase 20

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004596 peptide alpha-N-acetyltransferase activity molecular_function

KEGG:

id description
K17972 NAA20, NAT3; N-terminal acetyltransferase B complex catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255442.3 True 875 mRNA 0.44 6 33431923 33436804

Neighbor

gene id symbol gene type direction distance location
LOC103037759 tmem30ab,LOC107721815,LOC107658180,LOC107597847,LOC108257743,LOC107714749,LOC107581488 coding upstream 355783 33070811 ~ 33076140 (+)
filip1 filip1 coding upstream 364196 33016420 ~ 33067727 (+)
kif13b kif13b coding upstream 461904 32931610 ~ 32970019 (+)
extl3 extl3,LOC107745900,LOC107548434,LOC107704067,LOC107559127 coding upstream 541482 32854082 ~ 32890441 (+)
LOC103043556 LOC108426268,LOC108257619,LOC107548420,LOC107719437,LOC107669431,LOC107559097 coding upstream 740262 32591870 ~ 32691661 (+)
cfap61 NA coding downstream 7598 33444402 ~ 33498321 (+)
insm1 NA coding downstream 71270 33508074 ~ 33511617 (+)
xrn2 xrn2,LOC107704080,LOC107669450,LOC107548427 coding downstream 188682 33625486 ~ 33649657 (+)
pax1 pax1,LOC103035152,LOC107564482,LOC107548404 coding downstream 239271 33676075 ~ 33681836 (+)
ndufaf7 ndufaf7 coding downstream 352778 33789582 ~ 33798774 (+)
G23289 NA non-coding upstream 71324 33360380 ~ 33360599 (+)
G23286 NA non-coding upstream 78662 33353000 ~ 33353261 (+)
G23282 NA non-coding upstream 85863 33345812 ~ 33346060 (+)
G23255 NA non-coding upstream 224391 33207312 ~ 33207532 (+)
G23253 NA non-coding upstream 241208 33189961 ~ 33190715 (+)
LOC111195982 NA non-coding downstream 64433 33501237 ~ 33502351 (+)
G23349 NA non-coding downstream 131590 33568394 ~ 33568942 (+)
G23356 NA non-coding downstream 142463 33579267 ~ 33579522 (+)
G23367 nkx2-4 non-coding downstream 213833 33650637 ~ 33654989 (+)
G23427 NA non-coding downstream 448658 33885462 ~ 33887869 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 262531 33083642 ~ 33169392 (+)
LOC103037425 LOC108426312 other upstream 350061 33076624 ~ 33081862 (+)
LOC103042732 NA other upstream 590577 32837052 ~ 32841346 (+)
G23086 cpsf2,LOC107704064,LOC107548411,LOC107559080,LOC107669458 other upstream 604984 32822344 ~ 32826939 (+)
G22834 NA other upstream 1937025 31494345 ~ 31494898 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other downstream 150725 33587529 ~ 33595711 (+)
cebpzos cebpzos other downstream 341138 33777942 ~ 33779903 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other downstream 457532 33894336 ~ 33964508 (+)
trdn NA other downstream 1789994 35226798 ~ 35302347 (+)
LOC103040783 LOC108411309 other downstream 2606627 36043431 ~ 36096726 (+)

Expression


Co-expression Network