insm1


Basic Information

Item Value
gene id insm1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 33508074 ~ 33511617 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255446.3
CAGTacaaaagatttatttatttgtttgtttagtattgtgtgagatgccctgtgtaAGTActagtgtttgtgtatgtgtatgtggttGTATTTTCAGACATTCCATCTGTACTGAGATTAATTCCACCAGCTTAGCCATGAGGTAATTAAACAAACTGGACTTGAGGatagtgacatttaaaaaaaatcgattttgagATATAccagtatttatatttacaattcatacagtgttttattattacatttgttCTACATTTGTAGAAACTTGGAGAAACCTTTAGAACAGAGGCAAATGGTTAAGGATTGTTGTTGTCATTTATGGTTAACcccctccaacacacacacacacacacagacatacacacaccctgTTTTGGCAGGATGGGAGCCCCCTCTGTAGGAGGCTGTAGGCTACCAAAGCCTGTGTatacgcatgtgtgtgtgtgtgtctgccgaAAAGCCATCAGACCGTAAAGCAGGATAGAGGTGCCCCCCACCGCCCCACCGCGCGCCCTTGGGGCCACTGCGCGTCTAATAAAACGCCCTCAGGTACATCTGCTTAGCAATCTGCAAATCCTCCTCCAAAGCGCGAACCCGCAAAGCCAAGCCTTCCCTCCAGCCTCCGCCCACTCGCATCCGCAGGGAGCACGCCGCCGTCTGATTGGCTCGGGATGAGGCAAGCGTAGGGAGGGGGCAGGGGGGTGACAATGTCATCATTTCTGCTTAAAAACGAGTGCAGCTATGCTTCAGTCATGACAAGCATCTGATGTAAAGGGgtggaaaagaagaagaagaagaagagcactACAATCtttcccccctccctccctcacgcgctctctctctcttccactccCACACGAGCTGACTCACTACCACCCAAAACAAAAGCAGCCTGCCTGGGAGCTCCAGGGGAGAACAAGTGCCTTCCTCGCGCAAAATCGCAGAACAGAGATGCCGAGGGGATTTCTGGTGAAGAGGAACAAGAAAGCGACGCCCGTGTCGTACCGGATACGCACAGATGAAGAGAATGAAGAAGTGCCTGGCGCGCGATGCAGCCCGGGACGCACCGATGCATCCTcctcagcatcagcatcagcaccagcatcatcagcagcaccagcatcagTACCAGCGCCACTGTTATCATCATCCTTACCATCCTCATCCTCCACTCTGGCTATGAGGGGGGAATGCAAGCCGGTTCAGTTCGGAGACCCCGAAGCGGTGTGCCTCTCGCTCTACAGCCCCACGCGTCCCGTCAGCAAGGAGCACGAGCGCGCCGGCTTGGAGAAGCGCTTCAGCCTCGGCTCGCCCATTTCAGCCGAGTCTTTCCCGAGCCCGGCCGCCCTGCACAGCCTGGACCAGCTGCTTCTCGCCCCCGTGGACCTAAAGATCGGCACGAGTAACAGCAACCGAGGCGCAAATGCGCCTGGGAACGGGAGCGCGCCTGGAGTCAGGAGCGCGCCTGGAATCAGGAACGCGCCTGGAGTCAGGAGCGCGCCTGGAAACGCACCCAAAAGATcgtcctcctcttcttcatcttcctcgTCCGAGGCCGAGCGCAAAAACAAGCCCAAGCGTCCCAAGGCCATAAGGAAGCTGCAGTTCGAGGACGAGGTCACCACCTCTCCAGTCCTGGGCCTCAGGATCAAGGAGGCTCCCGAGGGGCACGACGAGGGACGCGCGGTGCAGCAGAAGCAGTCGCTGGGCGAGTTCGTGTGCCAGCTGTGCCGCGAGGCGTACGCGGACCCATTCGCGCTGGCGCAGCACCGCTGCTCCAGGATCGTGCGCGTGGAGTACAGGTGTCCTGAGTGCGAGAAGGTGTTCAGCTGCCCCGCTAACCTCGCCTCGCACCGGCGCTGGCACAAGCCCAAGCCACCGAGCGCCGGACAGGGGCAAGAGCAAGGAGGCCACGTGGGACAGGGCAGCAAGACGAGCAGCTCCGAGAGCGACCGGGACACCGTCAGCCCGGGTCTGTCCGAGTCCGGCTCCGAGGAGGACGGCGCATGCGAGTGCCAGCACTGCGGGAGGCGCTTCAAGAGGCACGCGTACCTGAGGAAGCACGTGCTCGCGCACCACAGCCACCAGACCCACCAGAACCACCAGGACCACCGGATGGAGGAAGACGGGAAGGTCGAGAAAGACCCCctgcagcctcagcctcagcatCATCAACAGCATCAGGACCAACTTCAAGCCCAGCCCCCTCTCAATCTCAGCGCGCAGGAGGTCCACATATGTCCCATCTGCGGCGAGTCTCTCCCAAACCGCGCCAGCCAAGAGAGGCACGCTCGCCTCCGGCACGCCTCGCGGGCTTTTCCATGCAAGCACTGTCCGGCCGTCTTCTACAGCTCCCCCGCGCTCACGCGCCACACCAACAAGTGCCACCCGTCGGAGAACAGGCAGGTGATTCTGCTCCAGGTGCCCGTGCGCCCGGCCTGCTGAAGCGCAGCACGCTCCACATCCACCAATCACAATCTCGCAAGGCTTCATCGCCTAAAAAGAGgctcttttaaaataaacaaacaagaaaacatgaaaacaaccCTTTTACGCAGGATCGTGCGCATTTTACGCACGCCGGACACCCCTGCgtaaagagacacacacacagaaaccacAGAGACGCGCGAGTTTCACTTTTACGCGCGTCTCCATCCACGCGCCACTTTAACTTGCATCGTGAACGCGCGTTAATCGTCAAACAGGACACACAGACTCCAGACCCTGCAGTCCTGTACGAAGTGAAGAGTTGAAAAGCACTGTTTAGactgttaaattatttttctaggATTCTTCTGCAGTAGCTTCTAGACCTAAGAAGACCTGTGTGCCAATACAGCAAGATGCCTTCAGTCCACAGGCCTATCcacttatatatacacacacacatacacacacactcacacacacacacacacacacatttatatacacacCTTTAGCTTTAATAGAGCTTGTGAATCTGTGGACTTTTTTGGACTCTAGCTTTTTCACTCCCACCTTAAAAAAAGGGGATCCGACCTTTCCTTATTTCCTAGTGTAGCCAGAAATGCCTTGAAATGATAGCTCTTTTTTCCACAGAGGCTCCGCTGTAAACCTGCCTTAATCATTTACTACGTTGGGCTGAGTGAATGTCTTATTTATTACCTTAAAAGTGTGTTGAAACTGTatgcttattatttttatatcgaTCCAAGGTGTATACGTTCACACTGGCTTTTAATTAATCgatcatgtatttatttattgcaaatgttttatttaaattattctgtCGGCGTGGTCAGTGTGTGGGTTAGGGCTGGGTGAGTTTTGAAGCAGCCAAAAGTTTGATTTGAGTGGTGTGTCCGTATAGCCTAGGAGTCAACAGGACAAGCTGTCTCACTGCTTTTAGATTTACAATCATTAGCCTATTCCCTATAGGCCAATTAGTTTTTTAAGATCATTACAGTGCTTGTGTGTCTCTCCAGTATtgctatatgtccaaatatgaataataatgatgatgataataaacaATCCAAAAACTCTTAAA

Function

GO:

id name namespace
GO:0043697 cell dedifferentiation biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0070654 sensory epithelium regeneration biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:0043565 sequence-specific DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255446.3 True 3544 mRNA 0.53 1 33508074 33511617

Neighbor

gene id symbol gene type direction distance location
cfap61 NA coding upstream 9753 33444402 ~ 33498321 (+)
naa20 naa20 coding upstream 71270 33431923 ~ 33436804 (+)
LOC103037759 tmem30ab,LOC107721815,LOC107658180,LOC107597847,LOC108257743,LOC107714749,LOC107581488 coding upstream 431934 33070811 ~ 33076140 (+)
filip1 filip1 coding upstream 440347 33016420 ~ 33067727 (+)
kif13b kif13b coding upstream 538055 32931610 ~ 32970019 (+)
xrn2 xrn2,LOC107704080,LOC107669450,LOC107548427 coding downstream 113869 33625486 ~ 33649657 (+)
pax1 pax1,LOC103035152,LOC107564482,LOC107548404 coding downstream 164458 33676075 ~ 33681836 (+)
ndufaf7 ndufaf7 coding downstream 277965 33789582 ~ 33798774 (+)
LOC103030910 LOC108444009 coding downstream 471577 33983194 ~ 34046385 (+)
LOC103030598 cldn20,LOC103030598,LOC107679670,LOC105017817 coding downstream 539636 34051253 ~ 34069327 (+)
LOC111195982 NA non-coding upstream 5723 33501237 ~ 33502351 (+)
G23289 NA non-coding upstream 147475 33360380 ~ 33360599 (+)
G23286 NA non-coding upstream 154813 33353000 ~ 33353261 (+)
G23282 NA non-coding upstream 162014 33345812 ~ 33346060 (+)
G23255 NA non-coding upstream 300542 33207312 ~ 33207532 (+)
G23349 NA non-coding downstream 56777 33568394 ~ 33568942 (+)
G23356 NA non-coding downstream 67650 33579267 ~ 33579522 (+)
G23367 nkx2-4 non-coding downstream 139020 33650637 ~ 33654989 (+)
G23427 NA non-coding downstream 373845 33885462 ~ 33887869 (+)
G23462 NA non-coding downstream 534973 34046590 ~ 34047774 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 338682 33083642 ~ 33169392 (+)
LOC103037425 LOC108426312 other upstream 426212 33076624 ~ 33081862 (+)
LOC103042732 NA other upstream 666728 32837052 ~ 32841346 (+)
G23086 cpsf2,LOC107704064,LOC107548411,LOC107559080,LOC107669458 other upstream 681135 32822344 ~ 32826939 (+)
G22834 NA other upstream 2013176 31494345 ~ 31494898 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other downstream 75912 33587529 ~ 33595711 (+)
cebpzos cebpzos other downstream 266325 33777942 ~ 33779903 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other downstream 382719 33894336 ~ 33964508 (+)
trdn NA other downstream 1715181 35226798 ~ 35302347 (+)
LOC103040783 LOC108411309 other downstream 2531814 36043431 ~ 36096726 (+)

Expression


Co-expression Network