armc2


Basic Information

Item Value
gene id armc2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 69338541 ~ 69359553 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255669.3
CGCCTCAGAGTtgctaggttaggttaggtagtTTGTGAAGAGCTGGAAACACGGCCGGGAACAGCGAACGCAGTGAAGcGCGGCGGCGGCTCGTGCTGCGGCGGGTTTGGTGCGGTTTATCGGTTCTCCTGCTCGTCTTTACTTCAGCAATACTGGGAATGTAGAACATCTTCATCCTTGCAAAATGATGGTGTTCATATGGGCTTAAAGCTAGCAATAGTTTAGCTGTACAGCCCACACATGGCTTCAGTGGAGCGGGATAAGCAGGATCCCTTCTACCTCAGTCATGGTGCTAAGAGACCGACCAGCGCAGAGATAGTGACTGAGGCCCGGCGCTCTCTCAGGATCCTCGGCACTCAGAGGCCCTTCACCCCACGGGATGAGCAGAGGCAGCTCTTTGGAGATGCATCAGCTCGCACACGTGATAGAAGGCCACCATCTTCATTCAGTCTTCATGCCCGGAATTTTGAGGCTTCTGATTCTAGGCCAAGCTCTGGAACCCGCCTCTCTCCTTTAGAACATAAACCCAAGCTGCCCCTGTCCAAGGATGAAGACTACAATGAAAGTGGAACAGCTGTGCCTAAACCCCCAATTGCGCCCCTGGACAGGAAAGGTTTAGCAGGGGCCAGGACCAGGCAACTCAGACCAAGGTCACTCACCCGACTACCTCCTATGACTCAACAATCAAAAGaaCTTCACACTGAGGATTGTCATGAGCAACCAAAACTGAGCTTGGAGACAGTCCAGcgaacaaacacaaataatcTCCAGCATTGTAATGCCAGGCGAGACAGAACAGAGGCACCACCAGAGCTATCTACCAAACATAGTGGAATGCAACAGCCCAGCAGAGCTACCCCTCAGAAAAAGGAAACAGATACAGAGGCTGACAGTGGCCATGGGGACATGACAGGAAGAGATGCCACGGACGAATCTGTGTTCTGGAACTTTGAGGTGCTTCCTGTTCTGCAGGAGTTTGAAGCTGTGATGCCAGGAGGAAGTGTGTCAGAGGAGACTATTGAGCAGCTTTGTGATGCCTGCACAGCTCTTCACTGTGTTTTGGCAGAGAGAGGCAAGCTGGGTAGGCGGTTAAAGAAAAGGTCCACCCTTCTCCGAGCACTGTTTAGACTGATAGATTTGGGATCAGACCAACTCAACTTAGCTCTGGGCAAACTCATTCTTGCACTCAATGTCAGTGGGAACAATCTTCTAAACATTTGCAAGCTGATCTTCAAAATCAGCCGGAGCTCCAGTAATGACGTACTGTTTCAGAAAAACTCCATTATAGATTCACTCCTGCCGCTGCTGCAGTGTGAGGACTTGTATAGCAATGGGGAGGCCGTGTTGTACACTGTGGGCTCCCTAAAGCTCCTCTCTGGGAACTGCGCCCTCTCCAGGCTGCTCCTGGCTAAAGACTTTATCAGTGTCCTCCTGCAACTCGCCCAGAAGCTCCTCAGGTTGACTGATCCTGATGCTCTGCCTGATCATAATCCCACTGTAGCAGGACGTGACCAGAACCCTATAGCAGGACACATACTGGTGCAGCTGACAGCAGCCCTTAGAAACATGGCTGACCTGTCTGAGTCCCGTCCAATGTTTACATCAAACGATGTCTTCTCCACACTTTGTAAAATCATGGATCTATACCAAGATGACCAGGACGTCTGTCTTAACGTGGCCAGGATATTAAGCAAGCTGTCCTCCTATGCCGGTTGCTGTTATGCGCTATCTGAGACGCTGTGCTGTTACAGGCTATTTTTAGATCTGTTGAGCAAACACAGCAGGAAACAGAATCTGGTGGTGCGTCTCCTGTTCACATTAGGAAACCTGGCAGCCAGGAGCAGTGAGGCCAGGGAAAGAGTGTATGAAGAGGAGGGGGCTGCAGACATTCTCATAGGCCTTTTCCAGCACTACCACCGAGCAGCTTTTTTGGCCTCCAAGAACCCTCAGCATGAAGAAGAGGATGTCCTGGTGAAGCTGATTAGAGTTCTGGCCAACCTGTCTATTCACCCTACTGTAGGCAGAGCACTGGCAGCAAATGCGTTGTGTGTGCAGCTACTGCTGGAGGTGATGGAGGTCAGGTCTGTGGAAGAGAGTACAGAGTTGGTAGTAAACGCATCAGCTACTATCAACAATCTGTCATACTACCAAGAGGAGGGCACTGTGGTCCGtgcccagcacacacacatctctaaACtgttgttgAGGTTATTATTAAGCTCTAACATGGATGTTGTGTTAGAGGCCACACGCGTGTTTGGAAATCTATCTCAGATCAAATATGTGCGACACTTTATCATCGAGAACAAAGTGCACCAGTTTATAGTGACATTGCTGGACTCCAAGAACCCTGATGTATGTTTCTCAGCATGTGGAGTCCTCATGAACCTCTCAGTGGATCCGGAGTACAGAACAATACTGAGAAAAGAGGGAGCCATACAAAAATTGATGGACTGTCTGCGAGACTTTGGGCCTAAGGATTGGCAGCTGGCTGGTCTAGTTTGTCAAACTCTTTGGAACTGCATGGAAGATGGTGAGACACAAAACATGCAAGAGCTGCTGGAGATACTCTCTCTGTATTCAgATCAGACATTTTTGCAATGGCCCTCCTGTGATGATGTTAAAGAATACCAGAATTCATGCTGGGAACAAGACTTTTTGCCTGTTGCTCAGAAGCTGAAGAAACGCATACAAAGCAACATGAACCTAATGGAACCAATCAGCGAGCCTTCCTGAACAACCATTCACACCACATACACTGAAGTGTTTAGCATGTGTATCCGAGTGTGTGACAGAACAAGGATTTTTCAGGGTATTTACTGATTGCACTTTAATGTTTACAATGTTTAATTTTCTGCCAACAatttaaaactataaacaacattttaaaaatagtttatactCTATGCTCCTGATACAGAACCAGCAATAAATGAGAACACTGTGAATGTTTATGAACtatgtaacaaaatatataacaattaaTAACAACACACTTATCCCAGGCATTATGCTTTCCTTATGTTTAATGTCATTAATACGGTCTTATAGCAGGTCCAGGTTGTAGGCATGTCTTTAAGCCATTGAGAAACATGTGACCATGAGACTGAGagcacatttaaacaactgGCCAGGTGTTCTCCTGCAGTCCATTATTAACcaagaaatacttttttaatgttgcTTGCTATAAGTATAAGAGATGCCTTAAGTACTGGATACACTGTCAGTAGATAAAGAAATATAGTTTCCTGGTCAAA
>XM_007255670.3
ACGATGACGTCGCGGGGCGCGTGCACGCCTCAGAGTtgctaggttaggttaggtagtTTGTGAAGAGCTGGAAACACGGCCGGGAACAGCGAACGCAGTGAAGCAATACTGGGAATGTAGAACATCTTCATCCTTGCAAAATGATGGTGTTCATATGGGCTTAAAGCTAGCAATAGTTTAGCTGTACAGCCCACACATGGCTTCAGTGGAGCGGGATAAGCAGGATCCCTTCTACCTCAGTCATGGTGCTAAGAGACCGACCAGCGCAGAGATAGTGACTGAGGCCCGGCGCTCTCTCAGGATCCTCGGCACTCAGAGGCCCTTCACCCCACGGGATGAGCAGAGGCAGCTCTTTGGAGATGCATCAGCTCGCACACGTGATAGAAGGCCACCATCTTCATTCAGTCTTCATGCCCGGAATTTTGAGGCTTCTGATTCTAGGCCAAGCTCTGGAACCCGCCTCTCTCCTTTAGAACATAAACCCAAGCTGCCCCTGTCCAAGGATGAAGACTACAATGAAAGTGGAACAGCTGTGCCTAAACCCCCAATTGCGCCCCTGGACAGGAAAGGTTTAGCAGGGGCCAGGACCAGGCAACTCAGACCAAGGTCACTCACCCGACTACCTCCTATGACTCAACAATCAAAAGaaCTTCACACTGAGGATTGTCATGAGCAACCAAAACTGAGCTTGGAGACAGTCCAGcgaacaaacacaaataatcTCCAGCATTGTAATGCCAGGCGAGACAGAACAGAGGCACCACCAGAGCTATCTACCAAACATAGTGGAATGCAACAGCCCAGCAGAGCTACCCCTCAGAAAAAGGAAACAGATACAGAGGCTGACAGTGGCCATGGGGACATGACAGGAAGAGATGCCACGGACGAATCTGTGTTCTGGAACTTTGAGGTGCTTCCTGTTCTGCAGGAGTTTGAAGCTGTGATGCCAGGAGGAAGTGTGTCAGAGGAGACTATTGAGCAGCTTTGTGATGCCTGCACAGCTCTTCACTGTGTTTTGGCAGAGAGAGGCAAGCTGGGTAGGCGGTTAAAGAAAAGGTCCACCCTTCTCCGAGCACTGTTTAGACTGATAGATTTGGGATCAGACCAACTCAACTTAGCTCTGGGCAAACTCATTCTTGCACTCAATGTCAGTGGGAACAATCTTCTAAACATTTGCAAGCTGATCTTCAAAATCAGCCGGAGCTCCAGTAATGACGTACTGTTTCAGAAAAACTCCATTATAGATTCACTCCTGCCGCTGCTGCAGTGTGAGGACTTGTATAGCAATGGGGAGGCCGTGTTGTACACTGTGGGCTCCCTAAAGCTCCTCTCTGGGAACTGCGCCCTCTCCAGGCTGCTCCTGGCTAAAGACTTTATCAGTGTCCTCCTGCAACTCGCCCAGAAGCTCCTCAGGTTGACTGATCCTGATGCTCTGCCTGATCATAATCCCACTGTAGCAGGACGTGACCAGAACCCTATAGCAGGACACATACTGGTGCAGCTGACAGCAGCCCTTAGAAACATGGCTGACCTGTCTGAGTCCCGTCCAATGTTTACATCAAACGATGTCTTCTCCACACTTTGTAAAATCATGGATCTATACCAAGATGACCAGGACGTCTGTCTTAACGTGGCCAGGATATTAAGCAAGCTGTCCTCCTATGCCGGTTGCTGTTATGCGCTATCTGAGACGCTGTGCTGTTACAGGCTATTTTTAGATCTGTTGAGCAAACACAGCAGGAAACAGAATCTGGTGGTGCGTCTCCTGTTCACATTAGGAAACCTGGCAGCCAGGAGCAGTGAGGCCAGGGAAAGAGTGTATGAAGAGGAGGGGGCTGCAGACATTCTCATAGGCCTTTTCCAGCACTACCACCGAGCAGCTTTTTTGGCCTCCAAGAACCCTCAGCATGAAGAAGAGGATGTCCTGGTGAAGCTGATTAGAGTTCTGGCCAACCTGTCTATTCACCCTACTGTAGGCAGAGCACTGGCAGCAAATGCGTTGTGTGTGCAGCTACTGCTGGAGGTGATGGAGGTCAGGTCTGTGGAAGAGAGTACAGAGTTGGTAGTAAACGCATCAGCTACTATCAACAATCTGTCATACTACCAAGAGGAGGGCACTGTGGTCCGtgcccagcacacacacatctctaaACtgttgttgAGGTTATTATTAAGCTCTAACATGGATGTTGTGTTAGAGGCCACACGCGTGTTTGGAAATCTATCTCAGATCAAATATGTGCGACACTTTATCATCGAGAACAAAGTGCACCAGTTTATAGTGACATTGCTGGACTCCAAGAACCCTGATGTATGTTTCTCAGCATGTGGAGTCCTCATGAACCTCTCAGTGGATCCGGAGTACAGAACAATACTGAGAAAAGAGGGAGCCATACAAAAATTGATGGACTGTCTGCGAGACTTTGGGCCTAAGGATTGGCAGCTGGCTGGTCTAGTTTGTCAAACTCTTTGGAACTGCATGGAAGATGGTGAGACACAAAACATGCAAGAGCTGCTGGAGATACTCTCTCTGTATTCAgATCAGACATTTTTGCAATGGCCCTCCTGTGATGATGTTAAAGAATACCAGAATTCATGCTGGGAACAAGACTTTTTGCCTGTTGCTCAGAAGCTGAAGAAACGCATACAAAGCAACATGAACCTAATGGAACCAATCAGCGAGCCTTCCTGAACAACCATTCACACCACATACACTGAAGTGTTTAGCATGTGTATCCGAGTGTGTGACAGAACAAGGATTTTTCAGGGTATTTACTGATTGCACTTTAATGTTTACAATGTTTAATTTTCTGCCAACAatttaaaactataaacaacattttaaaaatagtttatactCTATGCTCCTGATACAGAACCAGCAATAAATGAGAACACTGTGAATGTTTATGAACtatgtaacaaaatatataacaattaaTAACAACACACTTATCCCAGGCATTATGCTTTCCTTATGTTTAATGTCATTAATACGGTCTTATAGCAGGTCCAGGTTGTAGGCATGTCTTTAAGCCATTGAGAAACATGTGACCATGAGACTGAGagcacatttaaacaactgGCCAGGTGTTCTCCTGCAGTCCATTATTAACcaagaaatacttttttaatgttgcTTGCTATAAGTATAAGAGATGCCTTAAGTACTGGATACACTGTCAGTAGATAAAGAAATATAGTTTCCTGGTCAAA

Function

NR:

description
armadillo repeat-containing protein 2

GO: NA

KEGG:

id description
K24123 ARMC2; armadillo repeat-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255669.3 True 3260 mRNA 0.47 19 69338566 69359553
XM_007255670.3 False 3216 mRNA 0.47 18 69338541 69359553

Neighbor

gene id symbol gene type direction distance location
foxo3 foxo3,LOC108436468,LOC107679488,LOC107601202,LOC107696126,LOC107601425,LOC107726429 coding upstream 16834 69286015 ~ 69321707 (+)
afg1l NA coding upstream 58576 69243718 ~ 69279965 (+)
nr2e1 nr2e1,LOC107726614,LOC107601200,LOC107726424,LOC107602776 coding upstream 122678 69203834 ~ 69215863 (+)
nbas nbas,LOC108442060,LOC108439588,LOC106593169,LOC102775840 coding upstream 613898 68352427 ~ 68724643 (+)
ppp4r3a ppp4r3a,smek1,LOC107555622,LOC107726626,LOC107698404,LOC107696138,LOC107601285 coding upstream 1296173 68023937 ~ 68042368 (+)
cep57l1 NA coding downstream 81890 69441443 ~ 69450742 (+)
LOC103045488 grm1a,grm1,LOC108436473,LOC108279026,LOC107679500 coding downstream 116289 69475842 ~ 69522615 (+)
LOC103025939 rab32,rab32a,LOC107679502 coding downstream 164478 69524031 ~ 69551783 (+)
adgb NA coding downstream 194985 69554538 ~ 69617723 (+)
LOC103044978 stxbp5a,LOC108436475,LOC107696120,LOC107679494 coding downstream 275082 69634635 ~ 69761975 (+)
G31724 NA non-coding upstream 237979 69097291 ~ 69100562 (+)
G31720 NA non-coding upstream 298617 69038510 ~ 69039924 (+)
G31715 NA non-coding upstream 371731 68966479 ~ 68966810 (+)
G31648 NA non-coding upstream 678434 68625289 ~ 68660107 (+)
G31629 NA non-coding upstream 1056945 68281340 ~ 68281596 (+)
G31758 NA non-coding downstream 96188 69455741 ~ 69546704 (+)
G31932 NA non-coding downstream 746025 70105578 ~ 70106122 (+)
G31938 NA non-coding downstream 826058 70185611 ~ 70187725 (+)
G31993 slc22a16,LOC107693213,LOC107601215,LOC107732637,LOC107696098 non-coding downstream 856678 70216231 ~ 70217718 (+)
G32014 NA non-coding downstream 1018144 70377697 ~ 70379706 (+)
G31718 sec63,LOC107726621,LOC107696131,LOC107726458 other upstream 176658 69007441 ~ 69161883 (+)
G31702 fam84a other upstream 510969 68826643 ~ 68827572 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other upstream 1315601 68020040 ~ 68022940 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other upstream 1493907 67691441 ~ 67844634 (+)
G31407 NA other upstream 1840844 67497203 ~ 67497697 (+)
G31939 NA other downstream 837372 70196925 ~ 70199742 (+)
G32009 cdc40 other downstream 943483 70303036 ~ 70329028 (+)
G32105 naprt other downstream 1269379 70628932 ~ 70639739 (+)
G32151 brox,LOC107710643,LOC107732498,LOC107568230 other downstream 1497258 70856811 ~ 70867643 (+)
G32198 NA other downstream 1714295 71073848 ~ 71075886 (+)

Expression


Co-expression Network