LOC103046392 (LOC103046392,LOC108414880)


Basic Information

Item Value
gene id LOC103046392
gene name LOC103046392,LOC108414880
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44474148 ~ 44479904 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007256614.3
ctcctcctcctcctcctccacctcctcctttaGTCAGCCCTCAGTGAGACCCCTGAAGACCAGAGATGAAGACCCCCTGCTCTGGAGAGGAGCTGCTGAACTAGCATCCACATATACAGAGACCATGCAGGAGTTGGCCGTGACTCAACCCTTTGTGACCGTGATGAATGGCAACGTGAATCTGACCTGTACCACCCCATATGAAGAGAACCGTATTCCTCTAGTTGTTCTCTACAGCGTAGTGCTGTTTGTGGGCCTGCCTGCCAACCTTGCCACTGTCTACCTCACCCTGCTTCAGGTGCGGCGTAAAAATGTGTTGGGCATCTACTTGTTgagcctgtctgtctgtgactTCTCGTACCTGCTGACGCTGCCCGTGTGGGCCATGTATGTCAACGGGGGACACCGCTGGCTCTGGAGCTCGCTGGCATGTCAGGTGACGGGCTACGTCTTCTTTACCAACATGTACATCAGCATCTTCTTGCTGTGCTGCGTCTCCATCGACCGTTACGTGGCAGTGGTGTACGCTGTAGAGTCGCGGGGGCTCCGTCGCCAAAGATTAGCCACTCTGGTGACATTTATCATATGTATGGTGGTGGGCCTGGGCCATGTTCCTGTTTTTAACATGGAAGAGGGCAATGCAGCCACTGGTGAGCGTCGCTGTTTCGAGCCAGGCCAAAGCACAGCCATGGTCACAGGATTCAACTACGCACGCTTCTGCTTGGGCTTCTTTGCCCCACTTGCAGTGCTGGTCTTCACCAACCGAGCTATCTTGGCCAACGTACAGGCCAGCACTGGTCTGCGTCCCTGCCAGAAAGATAAAGTGCGCCTCCTAGCCGTAGCTGTGGTGTTGCTCTTCCTGGTCTGCTTTGGGCCGTACCACATCATCCTGCTGATGCGTGCCATTACCTACCACTTTCCCCAAGTGCAAGAGGACTGCCACTTCGAGAAGCGCATCTACACACCCTACACCATCTCCCTGGGCCTGTCTACGATCAACAGCGCCATTAACCCTATCCTGTACGTGCTGTCCAGCGACAACATCCGTAAGGAGATAAGGAGCTGCCTGGCTGGTTTTAAGAGCCGTGCCGGACACCACCAGCGCTCCACAGACAGCAGCCAGAACAAGATGCATTCAAAAAACTCTTCAGACCAGCTTTCCACAAGAGACCAGGAAAAGACAAGGATTCCTACACCGTGCTAGTTTCACAATTatgaaaatactttttcatacaTGCCAGTACACGCCAGTACATGCCGGTATTTGCTTCAGAAGAACTCTTTACC

Function

NR:

description
probable G-protein coupled receptor 132

GO:

id name namespace
GO:0038166 angiotensin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG:

id description
K08426 GPR132, G2A; G protein-coupled receptor 132

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007256614.3 True 1287 mRNA 0.53 2 44474148 44479904

Neighbor

gene id symbol gene type direction distance location
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516 coding upstream 2217 44460685 ~ 44471931 (+)
cdc42bpb cdc42bpb,LOC107684799,LOC106571112,LOC107746049 coding upstream 13889 44417438 ~ 44460259 (+)
LOC103042260 NA coding upstream 114745 44357276 ~ 44359403 (+)
LOC103041645 mcm3,LOC107732373,LOC107698330 coding upstream 126492 44339246 ~ 44347656 (+)
pnoc pnoc coding upstream 176429 44281122 ~ 44297719 (+)
LOC111191907 opn8a,LOC108410511,LOC107678826,LOC107726748,LOC107549662,LOC107743142 coding downstream 193226 44673130 ~ 44693172 (+)
LOC111197225 LOC108410507 coding downstream 230469 44710373 ~ 44727205 (+)
wdcp wdcp,LOC107600078 coding downstream 323655 44803559 ~ 44808849 (+)
atad2b atad2b,LOC107697175,LOC107667607 coding downstream 392560 44872464 ~ 44960236 (+)
LOC103023922 NA coding downstream 954015 45433919 ~ 45441256 (+)
G26124 NA non-coding upstream 96621 44377325 ~ 44377527 (+)
G26121 NA non-coding upstream 106217 44364592 ~ 44367931 (+)
G26107 LOC108439850 non-coding upstream 150326 44319986 ~ 44323822 (+)
G26088 NA non-coding upstream 201644 44272294 ~ 44272504 (+)
G26043 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107698369,LOC107726431,LOC107599081 non-coding upstream 210946 44256473 ~ 44263202 (+)
G26202 NA non-coding downstream 203284 44683188 ~ 44688403 (+)
G26216 NA non-coding downstream 255930 44735834 ~ 44736653 (+)
G26217 NA non-coding downstream 257263 44737167 ~ 44738115 (+)
G26225 NA non-coding downstream 288253 44768157 ~ 44768487 (+)
G26226 NA non-coding downstream 289358 44769262 ~ 44770002 (+)
LOC103033920 LOC108416105 other upstream 979832 43490323 ~ 43494316 (+)
G25880 NA other upstream 1049242 43424392 ~ 43424906 (+)
G25879 NA other upstream 1052102 43421771 ~ 43422046 (+)
rps29 NA other upstream 1110704 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 1212049 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 2048464 46528368 ~ 46549553 (+)
G26915 NA other downstream 3798363 48278267 ~ 48315894 (+)
G26995 NA other downstream 4075893 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 4098899 48578803 ~ 48618075 (+)
G27075 NA other downstream 4261310 48741214 ~ 48742439 (+)

Expression


Co-expression Network