Gene
RNA
| Item | Value |
|---|---|
| gene id | G59818 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 14889076 ~ 14891213 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68104 | False | 624 | lncRNA | 0.50 | 3 | 14889076 | 14891213 |
| TU68101 | True | 895 | lncRNA | 0.42 | 2 | 14890237 | 14891213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_14776978_14779978 | CX43.4 | coding | downstream | 107123 | 14776859 ~ 14781953 (-) |
| CI01000009_14763341_14773678 | NA | coding | downstream | 115395 | 14763212 ~ 14773681 (-) |
| CI01000009_14626182_14652953 | NA | coding | downstream | 235817 | 14625831 ~ 14653259 (-) |
| CI01000009_14476688_14573629 | HDAC4 | coding | downstream | 315447 | 14475724 ~ 14573629 (-) |
| CI01000009_14342067_14344332 | NA | coding | downstream | 544142 | 14341987 ~ 14344934 (-) |
| CI01000009_14905408_14907785 | NA | coding | upstream | 13276 | 14904489 ~ 14908077 (-) |
| CI01000009_14961220_14973307 | NA | coding | upstream | 69767 | 14960980 ~ 14973405 (-) |
| CI01000009_14974529_14974816 | NA | coding | upstream | 82829 | 14974042 ~ 14975420 (-) |
| CI01000009_15229965_15235247 | NA | coding | upstream | 338444 | 15229657 ~ 15235528 (-) |
| CI01000009_15301177_15304489 | NA | coding | upstream | 409884 | 15301097 ~ 15304500 (-) |
| G59794 | NA | non-coding | downstream | 74792 | 14814079 ~ 14814284 (-) |
| G59768 | NA | non-coding | downstream | 152795 | 14736017 ~ 14736281 (-) |
| G59754 | NA | non-coding | downstream | 172744 | 14716118 ~ 14716332 (-) |
| G59590 | NA | non-coding | downstream | 177883 | 14614098 ~ 14711193 (-) |
| G59583 | NA | non-coding | downstream | 204924 | 14682869 ~ 14684152 (-) |
| G59821 | NA | non-coding | upstream | 85476 | 14976689 ~ 14977258 (-) |
| G59898 | NA | non-coding | upstream | 199741 | 15090954 ~ 15091746 (-) |
| G59899 | NA | non-coding | upstream | 201261 | 15092474 ~ 15092737 (-) |
| G59913 | NA | non-coding | upstream | 211390 | 15102603 ~ 15102820 (-) |
| G59927 | NA | non-coding | upstream | 222546 | 15113759 ~ 15113970 (-) |
| G59811 | NA | other | downstream | 1612 | 14862397 ~ 14887464 (-) |
| G59490 | NA | other | downstream | 851203 | 14033564 ~ 14037873 (-) |
| CI01000009_13975122_13976026 | NA | other | downstream | 910462 | 13975099 ~ 13978614 (-) |
| G59097 | NA | other | downstream | 2599558 | 12288217 ~ 12289518 (-) |
| CI01000009_08858198_08860555 | NA | other | downstream | 6028513 | 8856310 ~ 8860563 (-) |
| G59941 | NA | other | upstream | 240891 | 15132104 ~ 15132503 (-) |
| CI01000009_15318811_15390382 | TNS1 | other | upstream | 485047 | 15318811 ~ 15390382 (-) |
| CI01000009_15654061_15662554 | ARPC2 | other | upstream | 755562 | 15653760 ~ 15663026 (-) |
