LOC103046397


Basic Information

Item Value
gene id LOC103046397
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 62909091 ~ 62925805 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257051.3
caaaacaaaacacacactctactCTCTTCTCTAATGCACAAACAAGCCCATTAGCTATTGACACGCACAAGTAAAGGAGACAAAATTATGTAGGACTAACAGAGAAGAAGGGAAGATTAGAGTGGAATGTGGTTTCTAACTGCCAATTCTCAGTGATCATGACTCCAATATGGACTGGAAAatgtctgcagctgctgctgtgcaTGTCTGTGctCTCACAGACTGAAGGAGGATCAAAGAGAAAAAAGCGGGAGTGGATTATACTTGCCAGAAAACTCATGGAGAATGTTGACTACACAAAACAGGAATTCATAGCTAAAATCTGGTCTGATAAGCACACACAGGCGAGTCCGTTGGAGTACAGTCTGACAGGACGCGGTGCAGACATTGAGCCTTATAACCTCTTTATTGTCAACCCTCAAAATGGCCTTGTCAGAATCACAGGGATTCTGGACAGAGAGGAGATATCACAGTATGATTTAAAAGGACTAGGTAAATACAGAAATGGCAGTCTGGCAGAAGGAGAGGTGCAGCTGAAAATACAGGTTTTGGATCAGAACGACAATCCACCAAAGTTCAGCTTCTCCCAAGGGTCTGTGAAGGAAGGCAGAAAAAtagGAACTCCTGTAATGCAGATAAAAGCTGAGGATGCAGATGAGCCAGGAACAAGCCATACTAAAATTGCGTACAGTATAGTGAAGCAGATTCCAGAAGAATCCGGTCCTATGTTCTCCATTAACAGAGACACTGGGAAACTCTATGTAAAACAGCACACTCTCGATAGAGAGACACTCGATTCCTACACGTTAATAGTGCAGGGTGTGGATATGGACGGAGCTCCAAATGGCAACACAGGAACTGGTACTGTGCAGATTAAAGTTCTGGACATCAATGACAATGTTCCCACTCTAGAACAAGATGAgTACACAGGTTATGTAGATGAAGGTGCAGCAGATGTGGTGGTGATGAGAATCAAAGCTCTGGATAAAGACTTGGAGAACACAGAGAACTGGCTGGCTCACTTTGAAATAATCGAGGGGAATGAAGATGGAGTCTTTAGCATAGAGACAGATCCCAAAACCAATGAAGGCCTTCTTAAGCTGGTCAAGCCTGTGGATTATGAAAAGGTCAAGCAGCTGAATCTGGGCCTGGTCATTTCAAATGTGGCTCCTTTTGCTAATGGGACTGAAAAATCTCTGGATTCAGACAAACAAATGGGAGGCACCGGATCTGGACTAAGACCTGAAAAACCTGACAAAAGGCCACTAACTCAAGAAGGAAAAAGATACTCAGTAAAAGTGTTTGTCAACAATTTATCTGATGGTATATTCTTTTCACCATCTGTAAAGTTGTTCTCTGTATCAGAAGATCCAGAGAAAATTAAAGTTCCTGAAATCATTGGTTCCTTTCCTGCTATAGATGGTGATACTGAACAAATTGCTAAAAATATCAGGTATGCGAAAGGATATGATCCAGATAACTGGCTGTCCATAAATGAGCAGACATCCGAAATTAAACTTGTGAAGACTCCAGATCGAGAGTCAACATTTCTGGTCAATTGTACCTATTTTGCCAAGATCATCTGCATCACCCAAGATGTACCTCCAAAGACTGCTACAGGAACAATAGCATTACAGGTGGAAGACTCTAATGACCACTGTCCTAAACTGACCAGCACCTATCAGAGCGTCTGCTCTGATACCAAAATCATAAACGTCACTGCATTTGATGAGGACGTCAATCCAAACGGAGAGCCTTATAAATTTGTGCTCATAGAGGAGGAGACTCGTGGAAAATGGGAAATAGTTCCTGTAAATGGAACAACTGTGAGCTTCCATGCCCAGGAGTTGCTGTGGCCAGGCTTTTATGAGCTGACTGTGGAGATCTTTGATGTGAAGGGTCTGGGCTGTGAGGACAGACAGAAGCTTCAGGTGGAGGTGTGTACCTGTGATGAAGACGATGCTTGTGTTGCGGCTCTCAGGGCAGCTAAAAGTCGTGTCTCTTCAGTCAAAGTGGGAGTTCCAGCCATCGGACTGCTGGTGGCAGGCATGGCTTTGCTCATGTTGGTTCCCATGTTGCTGTTGTTCTGCCAGTGTGGGGCAGTGAATGAATTCATGGAGCTGCCATTTGATACCAAAGAGCACTTGATCTCTTATCACACTGAAGGAAAAGGAGAAGACAAGGAGGTGCCAATTCTGAGTTTTTCAGAACAACAAACCAAATCAGTGGCTGGTAACCCTGGTAGCAACGTCTCCACAATGCTTTCTCATGGCCGTGGACAAGTTATGGGGATTGGTACCATGTTTGAGTACCAAAATAACACCTTATCATGTGAGCGTCATAGAAGCCACACCTGCTCTTCACTGTTCAGGCATGAGGTGCAAGATACCTATGGAGAGATAGCACTGCCTGATAACTATCTACGTGACTATTTTATTCagaaAGTAAGATATGGAGCTGGAAACCCACCTCTCACAGACAGTCTGTTGGTATACGACCATGAAGGTCAGGATTCTCCTGTTGGCTCACTGGGCTGCTGCAGTCTCCTTGAGTCAAGCAACAGTCTGGCATTTCTTAATGACTTGGGTCCAAAATTCATGGCTTTAGCAGAGATTTGCAGTGCTCCAGAACCATGTTCACCATTGTCAGAAGATAAAATCAATGGTAATGTACTGGACACCAACATCACCAGTGTAGATCATGATTCAAAGCCTGTTACACCGTTACAGGATCAAGACAAAGCTGATACCGAAGCACTCaataataatttagataatCTGTCCACCATGCACACTAATCAGATACAACTTGTACAGCAGAATCAGCCTCTTTACTATTTAGTGGAACATCAGGTACCAACCACTGTGATTCTTGCCGAAAGGCCTGCATATGGTGCATATTTGATAAATGGGTCAGCAGCGACTGGTGGGCTAAATCTATCCATTCCTGAAAGCCCAACTCTCTCTACTGTTTGGCTTCAAGGAAATCAAAgccaattccagcaccatgagcTGCCTGGGAGTGAGAAAGTGGTGCTAGTGCAAAATGAGTGTAATGAAACACCCACTTTGCTTTCACAAGCACATACAAATAATATGGTTCAAGGCATAGATTCAGGGCTCATTCAAGATTGTTCAACCTTGGATCCTGGAAGTCCAACACAAGCTCAGGCAGAATTACAGATACAAGACAGCTCTTTGAAGTTCAGTGAAGAGACAGGATCTGAGAATGTGTTCATGCTCAGGCACGACATTGTGAATCTCAGTAAGCCAGAAGATGCACTGGAGGAGCTCAATATAACAGATGAACTGGTCCCACCACATGGCAAAGGGCAAGAAAATATGGTGAAATTCTTAAAAGATGATACTAAAAGCATGGCACAAAATATAGCTCCCTTTGAATTAAATGGAATGCCTTCAAGTTTACCTGATATCCTGCAAGCTAGGCCCACTACTGAAGAAGTACTAGCTAAAGCCAATGTTATACAAAAAGAGCTTGAGCAGACTTTGTTAATTGCCAGACCACCAGAATCAGCAGCCAACATTGTTTCAGAAAACGATGATCTCAGTGGCAAAGAAACTGATGATCTTGCGTCAAAGATTCTAAAAGATTCACTAGAAGAGCCTAACCCCACAGTAAGGGACGCAGCTTCAGCTTTGCCACCTGACACAGAATTGAATGAGAATGAACAAGACAAGATGCCAGTCTATGAATTCCCTACAAGCACAAGCTCAGTTTTCTCAACTGAAACAGTAAAAGAAACTGTGTTGGACACCCATGTACCAAGTGTTGTCCAGTTAATCAGAAAAGATGCCACTCTTACAGAATGTAGCATCAAACTCAATAAGACAGACAAAATCAATGCTAATGATTCAGTGGAATTTGCAGTTATAGAAAATACAAGCTCATTGATGACCCAAGAAGTCATTCCTGAGCAAAGTCTTACTCATGAacttgagaaagaaagagaattcGTTGATTCTCAGCCAGTGATGGAAGACTTAACTgtaacagaggaaactgacttAATTTATGCATCGGAGCAAGAACTTGCAGTTGATTTTGGGACTACTGTTGAGACACCACAAGACATTTCAGTTGTGAATCTGATGGTAGACAGAGAGGTGGGAGCAGCAATTGACTTTCAAGCAACTTCGCTTACTaaggagataaagagagactTACATCCACAAAACTTAGAAGACATTAAGAAAAATGAGCATGGTCTTCATGAAGTTAATCAGAATGTTAGTCAGTTAGAGGAAGAGGAAGTCAGTGTATCAGTGCTAAATATGCATTTTGGAGTGACCAAGGAAGTACGCACTGAATAAATTCTTCTTACTCTTG
>XM_022664239.1
GACGGAGCTCCAAATGGCAACACAGGAACTGGTACTGTGCAGATTAAAGTTCTGGACATCAATGACAATGTTCCCACTCTAGAACAAGATGAgGTTATGTAGATGAAGGTGCAGCAGATGTGGTGGTGATGAGAATCAAAGCTCTGGATAAAGACTTGGAGAACACAGAGAACTGGCTGGCTCACTTTGAAATAATCGAGGGGAATGAAGATGGAGTCTTTAGCATAGAGACAGATCCCAAAACCAATGAAGGCCTTCTTAAGCTGGTCAAGCCTGTGGATTATGAAAAGGTCAAGCAGCTGAATCTGGGCCTGGTCATTTCAAATGTGGCTCCTTTTGCTAATGGGACTGAAAAATCTCTGGATTCAGACAAACAAATGGGAGGCACCGGATCTGGACTAAGACCTGAAAAACCTGACAAAAGGCCACTAACTCAAGAAGGAAAAAGATACTCAGTAAAAGTGTTTGTCAACAATTTATCTGATGGTATATTCTTTTCACCATCTGTAAAGTTGTTCTCTGTATCAGAAGATCCAGAGAAAATTAAAGTTCCTGAAATCATTGGTTCCTTTCCTGCTATAGATGGTGATACTGAACAAATTGCTAAAAATATCAGGTATGCGAAAGGATATGATCCAGATAACTGGCTGTCCATAAATGAGCAGACATCCGAAATTAAACTTGTGAAGACTCCAGATCGAGAGTCAACATTTCTGGTCAATTGTACCTATTTTGCCAAGATCATCTGCATCACCCAAGATGTACCTCCAAAGACTGCTACAGGAACAATAGCATTACAGGTGGAAGACTCTAATGACCACTGTCCTAAACTGACCAGCACCTATCAGAGCGTCTGCTCTGATACCAAAATCATAAACGTCACTGCATTTGATGAGGACGTCAATCCAAACGGAGAGCCTTATAAATTTGTGCTCATAGAGGAGGAGACTCGTGGAAAATGGGAAATAGTTCCTGTAAATGGAACAACTGTGAGCTTCCATGCCCAGGAGTTGCTGTGGCCAGGCTTTTATGAGCTGACTGTGGAGATCTTTGATGTGAAGGGTCTGGGCTGTGAGGACAGACAGAAGCTTCAGGTGGAGGTGTGTACCTGTGATGAAGACGATGCTTGTGTTGCGGCTCTCAGGGCAGCTAAAAGTCGTGTCTCTTCAGTCAAAGTGGGAGTTCCAGCCATCGGACTGCTGGTGGCAGGCATGGCTTTGCTCATGTTGGTTCCCATGTTGCTGTTGTTCTGCCAGTGTGGGGCAGTGAATGAATTCATGGAGCTGCCATTTGATACCAAAGAGCACTTGATCTCTTATCACACTGAAGGAAAAGGAGAAGACAAGGAGGTGCCAATTCTGAGTTTTTCAGAACAACAAACCAAATCAGTGGCTGGTAACCCTGGTAGCAACGTCTCCACAATGCTTTCTCATGGCCGTGGACAAGTTATGGGGATTGGTACCATGTTTGAGTACCAAAATAACACCTTATCATGTGAGCGTCATAGAAGCCACACCTGCTCTTCACTGTTCAGGCATGAGGTGCAAGATACCTATGGAGAGATAGCACTGCCTGATAACTATCTACGTGACTATTTTATTCagaaAGTAAGATATGGAGCTGGAAACCCACCTCTCACAGACAGTCTGTTGGTATACGACCATGAAGGTCAGGATTCTCCTGTTGGCTCACTGGGCTGCTGCAGTCTCCTTGAGTCAAGCAACAGTCTGGCATTTCTTAATGACTTGGGTCCAAAATTCATGGCTTTAGCAGAGATTTGCAGTGCTCCAGAACCATGTTCACCATTGTCAGAAGATAAAATCAATGGTAATGTACTGGACACCAACATCACCAGTGTAGATCATGATTCAAAGCCTGTTACACCGTTACAGGATCAAGACAAAGCTGATACCGAAGCACTCaataataatttagataatCTGTCCACCATGCACACTAATCAGATACAACTTGTACAGCAGAATCAGCCTCTTTACTATTTAGTGGAACATCAGGTACCAACCACTGTGATTCTTGCCGAAAGGCCTGCATATGGTGCATATTTGATAAATGGGTCAGCAGCGACTGGTGGGCTAAATCTATCCATTCCTGAAAGCCCAACTCTCTCTACTGTTTGGCTTCAAGGAAATCAAAgccaattccagcaccatgagcTGCCTGGGAGTGAGAAAGTGGTGCTAGTGCAAAATGAGTGTAATGAAACACCCACTTTGCTTTCACAAGCACATACAAATAATATGGTTCAAGGCATAGATTCAGGGCTCATTCAAGATTGTTCAACCTTGGATCCTGGAAGTCCAACACAAGCTCAGGCAGAATTACAGATACAAGACAGCTCTTTGAAGTTCAGTGAAGAGACAGGATCTGAGAATGTGTTCATGCTCAGGCACGACATTGTGAATCTCAGTAAGCCAGAAGATGCACTGGAGGAGCTCAATATAACAGATGAACTGGTCCCACCACATGGCAAAGGGCAAGAAAATATGGTGAAATTCTTAAAAGATGATACTAAAAGCATGGCACAAAATATAGCTCCCTTTGAATTAAATGGAATGCCTTCAAGTTTACCTGATATCCTGCAAGCTAGGCCCACTACTGAAGAAGTACTAGCTAAAGCCAATGTTATACAAAAAGAGCTTGAGCAGACTTTGTTAATTGCCAGACCACCAGAATCAGCAGCCAACATTGTTTCAGAAAACGATGATCTCAGTGGCAAAGAAACTGATGATCTTGCGTCAAAGATTCTAAAAGATTCACTAGAAGAGCCTAACCCCACAGTAAGGGACGCAGCTTCAGCTTTGCCACCTGACACAGAATTGAATGAGAATGAACAAGACAAGATGCCAGTCTATGAATTCCCTACAAGCACAAGCTCAGTTTTCTCAACTGAAACAGTAAAAGAAACTGTGTTGGACACCCATGTACCAAGTGTTGTCCAGTTAATCAGAAAAGATGCCACTCTTACAGAATGTAGCATCAAACTCAATAAGACAGACAAAATCAATGCTAATGATTCAGTGGAATTTGCAGTTATAGAAAATACAAGCTCATTGATGACCCAAGAAGTCATTCCTGAGCAAAGTCTTACTCATGAacttgagaaagaaagagaattcGTTGATTCTCAGCCAGTGATGGAAGACTTAACTgtaacagaggaaactgacttAATTTATGCATCGGAGCAAGAACTTGCAGTTGATTTTGGGACTACTGTTGAGACACCACAAGACATTTCAGTTGTGAATCTGATGGTAGACAGAGAGGTGGGAGCAGCAATTGACTTTCAAGCAACTTCGCTTACTaaggagataaagagagactTACATCCACAAAACTTAGAAGACATTAAGAAAAATGAGCATGGTCTTCATGAAGTTAATCAGAATGTTAGTCAGTTAGAGGAAGAGGAAGTCAGTGTATCAGTGCTAAATATGCATTTTGGAGTGACCAAGGAAGTACGCACTGAATAAATTCTTCTTACTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257051.3 True 4347 mRNA 0.43 14 62909091 62925805
XM_022664239.1 False 3510 mRNA 0.43 9 62918096 62925805

Neighbor

gene id symbol gene type direction distance location
LOC103046101 LOC108414576,LOC108416204 coding upstream 1575 62888868 ~ 62907516 (+)
LOC103034413 NA coding upstream 23793 62869111 ~ 62885298 (+)
LOC103033766 LOC103033766,LOC108416260 coding upstream 115503 62791748 ~ 62793588 (+)
LOC103029839 psma8,LOC103029839,LOC107572146,LOC100304914,LOC107723426 coding upstream 918427 61984639 ~ 61990664 (+)
LOC103031223 NA coding upstream 925632 61950471 ~ 61983459 (+)
ttr ttr coding downstream 9880 62935685 ~ 62940874 (+)
anapc4 anapc4,LOC107665412,LOC107683992 coding downstream 140715 63066520 ~ 63086982 (+)
slain2 slain2 coding downstream 162175 63087980 ~ 63111659 (+)
slc10a4 slc10a4 coding downstream 197501 63123306 ~ 63131100 (+)
zar1 zar1 coding downstream 207155 63132960 ~ 63134737 (+)
G30168 NA non-coding upstream 104337 62803591 ~ 62804754 (+)
G30138 NA non-coding upstream 170179 62737567 ~ 62738912 (+)
G30130 NA non-coding upstream 257154 62649364 ~ 62651937 (+)
G30125 NA non-coding upstream 321035 62587723 ~ 62588056 (+)
G30122 NA non-coding upstream 347011 62561878 ~ 62562080 (+)
G30280 NA non-coding downstream 191057 63116862 ~ 63117415 (+)
G30311 NA non-coding downstream 213493 63139298 ~ 63142668 (+)
G30314 NA non-coding downstream 223861 63149666 ~ 63150215 (+)
G30335 NA non-coding downstream 338145 63263950 ~ 63288134 (+)
LOC111191941 NA non-coding downstream 372058 63297863 ~ 63298732 (+)
LOC103045797 NA other upstream 55803 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 973008 61926080 ~ 61936083 (+)
c3h14orf2 NA other upstream 2384040 60520342 ~ 60525051 (+)
nme6 nme6 other upstream 3310759 59586709 ~ 59598332 (+)
atraid atraid other upstream 3349329 59554285 ~ 59559762 (+)
LOC103035278 NA other downstream 213 62926018 ~ 62931133 (+)
G30362 NA other downstream 409929 63335734 ~ 63345693 (+)
kit kit other downstream 1305439 64231244 ~ 64269695 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 2096614 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 2151975 65077780 ~ 65086780 (+)

Expression


Co-expression Network