zbtb25 (zbtb25)


Basic Information

Item Value
gene id zbtb25
gene name zbtb25
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 57433154 ~ 57438015 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258218.3
atagaatGGAGAagcaacagaaaaagaaagagggataACAAAGATAAAACTTCACTAAATTGTAGCTACAGGTTTATAACTAACTTTGTTGTGTGACTTTGTAGCTAAGTTCTCTTGTGAGGAATAagtcagttccaccttaaacatgACTAGAGTAagtgcactatttaaggtggaacggacaatTCCTGTAAAGAGATTTGCTGAGTGAACGatatgctagctagctatcatTCTCCACCATGCCAGCTAAAGCTAGCTATGTAGGGGAagctacatttttttcttttttttgcatgcgTGCCTCTCGCCATGCGTTGTGTCTGCATCTGCTAATGTACGGTCACGTGACAGAAGAGCCCGAGCAGAGCCTGTCCGTCAGACGCATAGGAAGCAGCACGAGCGCGTCCCTGCAGCAGCACGCGCCAgctaataatcataataatactaatagagCCGAGCGGTTCTCACGCACGTAGGCGggCATTGGGCTAGTAGAGGGGGCATCATGGACGTGTCTACCCACAGTCTGTTCCTCCTCCAGCAACTGAATGTCCAAAGAGAGTTTGGTTTCCTGTGTGATTGTACCGTAGCTATTGGCAATGTATACTTCAAAGCCCATCGAGCAGTGCTGGCTGCCTTCTCCAACTACTTTAAGATGATCTTCATCCATCAGTCCAGTGAGTGCATAAAGATCCAGCCCACTGATATCCAGCCAGATGTCTTCAGCTACCTGTTGCACATCATGTACACAGGCATGGGCCCTAAGCAGCCTGTGGATCAGAGCAGGCTGCAGGATGGCATCAAGTTCCTTCATGCATACCAGCTGTGCCGGAAGGCAGGTGAAGGCGGTCCTGACGCTTCCTCCGATGCCATTCGCATGTCCAACCTGTACGGCATCCAGATCTCCTCCCAGCTGACCACTAAAGAGTCGTCAGGCCTGAAGGCTGCCAGCACCTCACGAGATCCAGAAGATGGTCGCTCCAGTGCTCGGGCCGAGCGTGCTCTTGCAGGCCGACCTGCTCTTGCTGTGGGTCTTGAAGGACTTCCAATGGATCGCCAATCCCGAAGCCTCCGCGGGGTCTCCTCTGTGGCGTCGGGTGACGATTCAAATTCTATTTCAACCAGGATCAAGCAGGAGAGGGTGGAGGAGGAAGAGCAAGAAGAAGGGGAGGAGGAACACCAGGCGTCTGGCTCGCTCCCCTCAGCCAGGGGCAGCCCTTGTCAGATGGCTCTTTTCAAGGATGGTCCTTTGGCACTGCTGTGTCCTCGATGTGGCGCGCGGTGCCTGTCACCGGAGGGCTTGCAGGAACACCTTTTCAGTCATGCTGCCTGCACCCTGGAGCCCTCTATCAGCAGCTTGATGGAGGGGGGGCCCTCTGAAGATGGTGTTGGAGATGCCAGGGGACCAGAAGACAGGCGGGCTCAGAATGATCGCGTGGACAGAGGCACTTTAGAGGAGGCCTTGCGGCAAAGCCAGGCACTTGCTGACGAGTTGGCAGCAGAGTTGAAGCGAGGGGCCAGTAGCCCGACAGCAGGTTTCACCCGCAAAAGGAAAATGGCCTGTGCTGTGTGCAACCTGCGCTTCTCCCACAAGAGCCAGCTGCAGGAGCACATGTTCGCCCACGTGGGTAAGCCCCTGCGCTACCACCGCTATGGTCGCTTCTGTGGCCAGCTCCTGCATGGCTGCGAGGGAACACCAGACATCGCAGCCGTGGCCACAGCAGCTGAGGAGGCCATCCGGGACACTCAGGACAACGGCAGCTCCTGCTACTCGCTGGACTCGGAGGTGTCTCAAGAGAGTGTAGATGCTGTGACTGTGCAGTGATGCTCTGCTATTCAATGGACCTTTGCACTGACTTGCAGTCTCTACTCGTGGAAGATGTTCTTCAGCTTTGACCTCAGACACACTCTTTTCTTGTCCTGTTTCATACAATTTCCCCCTTGTTTGAGTTCAAGAAGTGCTGTTTCTAAAACCCCTGTGTTGACGAGTTCAGTGttggtgtattttttgtgaatGTAACTGAGCACTGCTTGACTGATGAGCCAGatgttgtgttttgtattttctaagAGTGTTACGACTGACACTGCACATGAAACTAATCCAGCTCAGACAATGAATTTGAAATCGAGCCAAACTGTGCTAGCAAACAGCTACATAAGTGCAGAACTGTTTTATGAATGTTTTGCAGCCAATTCTGATTCCTGAACAGTCCACCTTAATCCAAAAGAGCCCATACCCATTTCTGAATCATACTACAAATTTCTAAATTAAATTGGTAAACgtccattaaggattatattttctgtgatatattttctatttatatatgatCAGGATGTACTATCATTTATT

Function

symbol description
zbtb25 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB25 (zinc finger and BTB domain containing 25).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 25-like isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10504 ZBTB25; zinc finger and BTB domain-containing protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258218.3 True 2359 mRNA 0.50 3 57433154 57438015

Neighbor

gene id symbol gene type direction distance location
LOC103045802 inafm2,LOC106952300,LOC108165849 coding upstream 25761 57405751 ~ 57407393 (+)
LOC103046620 syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107668242 coding upstream 148370 57215344 ~ 57284784 (+)
ino80 ino80,LOC107668207,LOC107739367,LOC107721325 coding upstream 613718 56767269 ~ 56819436 (+)
vps18 vps18,LOC107739368,LOC107602125,LOC107659178,LOC107668247 coding upstream 667355 56759706 ~ 56765799 (+)
pigh pigh coding upstream 701816 56724380 ~ 56731338 (+)
LOC103047529 NA coding downstream 340190 57778205 ~ 57788035 (+)
LOC103043365 LOC108424527,LOC107569893,LOC107711660,LOC107665408,LOC107602225,LOC107721267 coding downstream 357377 57795392 ~ 57800871 (+)
LOC103042834 NA coding downstream 410452 57848467 ~ 57855123 (+)
LOC103041704 LOC108424533 coding downstream 421067 57859082 ~ 57875392 (+)
LOC103047227 NA coding downstream 440140 57878155 ~ 57889823 (+)
G28864 NA non-coding upstream 34933 57397948 ~ 57398221 (+)
G28833 NA non-coding upstream 314431 57118496 ~ 57118723 (+)
G28822 NA non-coding upstream 422435 57010477 ~ 57010719 (+)
G28807 NA non-coding upstream 603137 56829621 ~ 56830017 (+)
G28805 NA non-coding upstream 608155 56824688 ~ 56824999 (+)
G28872 NA non-coding downstream 12195 57450210 ~ 57516305 (+)
G28955 NA non-coding downstream 352236 57790251 ~ 57790951 (+)
G29003 NA non-coding downstream 473311 57911326 ~ 57911593 (+)
G29029 LOC108411326,LOC107721373,LOC108257828,LOC107659193 non-coding downstream 622910 58060925 ~ 58076530 (+)
G29036 NA non-coding downstream 677970 58115985 ~ 58119141 (+)
G28865 NA other upstream 30762 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 727062 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 979220 56337156 ~ 56453934 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other upstream 1121043 56290747 ~ 56312111 (+)
LOC103029514 srsf5,srsf5b,LOC103029514,LOC107756601,LOC107602033,LOC107549086,LOC107721313 other upstream 1193425 56232739 ~ 56239729 (+)
LOC103042006 NA other downstream 364876 57802891 ~ 57812488 (+)
G29155 foxq1 other downstream 979379 58417394 ~ 58418817 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 1626458 59064473 ~ 59112315 (+)
G29382 NA other downstream 1782517 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 1783251 59221266 ~ 59228840 (+)

Expression


Co-expression Network