LOC103027761


Basic Information

Item Value
gene id LOC103027761
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65592679 ~ 65597459 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259479.3
TAAACGTCACCGAGCTGCACCACGTGACCCGTGTTTTTCTAACATGGCTAGGAATGAGGAGAAGCAGCTGGGGAAACTGAACCGGTTATGGCTCCAGAAGGAGAGAGCGGAGGGTCGCATCAAGGATCTTAATGAACGGAGACCAAAGCTTGCAACTCTGAACTCAGTTGCAGCCGTGAAGAAATGGATACCAAGCATCAAGCGTGAAATCGAGTACTACCTGCAGCAGTCTCAGTTATCCCACTACCCAGAGAGGAAGATAACAGAGTTCCAGCAGCAAATTGAGCATCTGGAAAAGGAGTACAAGCGTTATCTCAACAAACTGCGCTCTCTGGACCCCACCTGCAAACATAAGCCTTGGACTCCAAGAGCCTACACCAAGAGGAGGCAAGACACTGACAGCAGTCAGTGTTTGGCCAAAAGGCTCTGCGATCCTGATCTTGGTAAAGAAACGTGTTCTGAAGAAGGAGCTACAACATCTGCCCTATTTGATCCTGATCTGCCTAAACAATCAACTGCCAGCACCAGCCCAACTTCCGATTGTCCAGAACAGGACCTCCCACTCTCTTTTGACCGCACCAAGCTGGCAGTAGCAGTGTCTGGGTCTTGGAGGGCTCCCTTGGAACAGCTGCAGGACATTACCAAGCTGGCGTGTGTCTTACACAGAGGCCTACCCAACCTGCACAGCTCCATAGCACCAGCTGGAGAACTCCAGGAAAGTCAGGAGACAAAAGAAACAACCTGTAGCGAAATACCTCAGAATAAGACAGAACATGTGCTGGGACTGGGGTGCTACTCATCTTCTTCTGATGAGGATAACCATTGAgatctgtgtgattttttttctcacccAATTTGTACAAAGGGATGTTGTAAAGATGACTGTGAGGCTTTTCTGTTTTGAacattgtataataaatagattttaaaaaattaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259479.3 True 939 mRNA 0.48 5 65592679 65597459

Neighbor

gene id symbol gene type direction distance location
LOC103027441 NA coding downstream 6110 65582983 ~ 65586569 (-)
LOC103029766 angptl1,LOC107658173,LOC107739855,LOC107669140,LOC107712858 coding downstream 174198 65370370 ~ 65418481 (-)
zyg11b zyg11b,zyg11,LOC107712854,LOC107669142,LOC107721807,LOC107658153 coding downstream 346990 65225005 ~ 65245689 (-)
trnad-guc_3 NA coding downstream 519866 65072742 ~ 65072813 (-)
trnad-guc_2 NA coding downstream 520464 65072144 ~ 65072215 (-)
LOC103027150 LOC108415562 coding upstream 853 65598312 ~ 65601539 (-)
jun jun coding upstream 9133 65606592 ~ 65608774 (-)
LOC103026271 prdx6,LOC107712864 coding upstream 241421 65838880 ~ 65847180 (-)
myoc myoc coding upstream 333864 65931323 ~ 65941098 (-)
vamp4 vamp4 coding upstream 350175 65947634 ~ 65965285 (-)
G30980 NA non-coding downstream 625 65591823 ~ 65592054 (-)
G30942 fam20b,LOC107597857,LOC107712860,LOC107658171,LOC107669149 non-coding downstream 118014 65473137 ~ 65474665 (-)
G30919 NA non-coding downstream 138419 65281419 ~ 65454260 (-)
G30900 NA non-coding downstream 433395 65154118 ~ 65159284 (-)
G30869 NA non-coding downstream 569727 65022352 ~ 65022952 (-)
G30990 NA non-coding upstream 80051 65677510 ~ 65681603 (-)
G31021 NA non-coding upstream 131020 65728479 ~ 65728703 (-)
G31029 NA non-coding upstream 236119 65833578 ~ 65835223 (-)
G31049 NA non-coding upstream 273605 65871064 ~ 65872082 (-)
G31051 NA non-coding upstream 277728 65875187 ~ 65875426 (-)
trnad-guc_8 NA other downstream 495006 65097602 ~ 65097673 (-)
trnad-guc_7 NA other downstream 499530 65093078 ~ 65093149 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other downstream 793503 64774684 ~ 64799176 (-)
scfd2 scfd2 other downstream 1829006 63528281 ~ 63763673 (-)
usp46 usp46 other downstream 2107658 63433792 ~ 63485021 (-)
LOC103031958 myo6 other upstream 1265006 66862465 ~ 67044318 (-)
G31424 NA other upstream 1826413 67423872 ~ 67432424 (-)
G31437 NA other upstream 1906290 67503749 ~ 67528337 (-)
arpc5 arpc5,arpc5b,LOC103045524,LOC107599090,LOC107698380,LOC107732423,LOC104921830 other upstream 2258147 67855606 ~ 67885433 (-)
LOC103046133 LOC108439589 other upstream 2335101 67932560 ~ 67940713 (-)

Expression


Co-expression Network