LOC103029237 (LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808)


Basic Information

Item Value
gene id LOC103029237
gene name LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65246531 ~ 65249310 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259483.3
ATAAACCAGCTCTGGTGCGGAGTAACGTTAgtggagcaggaggaggaagcctggctagctagctagcaattTGAGACATTTCTGTCgcttttcagtgtgtgttttagtttttttggaaaCTTCAGTTAGTTCCTAACCTAGGGCCCTTACTGTGTATTTGAGTTATGCCTCTCTAATGACCGACAGGCTTAAAGTTCATTCATGTGTCTCTCTGACAGTTAGCTAGCCACATAGCTACCAAGGTCACATATACACGCTACTCACACTTGTGGCTAACACGTGAATTTGGTAacttgtgtaagtacagtgCAGAATGGCTGAGCAGATCAATTTTGAGGACGAAGCGGAGGTGAAGCAGTTTTTAGACAACCTGGGAGTGGAGTACAGCTATCAGTgccacagagagaaagacccTGAAGGTTGTCAGAGGTTGGCAGATTACTTGGAGGGCGTAAAGAAAAACTACGAGGCCGCAGCTCAGGTCCTGAAGAAGAACTGTGAGGAGAATGGCCATGGAGAGAGCTGCTACAAGCTTGGAGCTTACCATGTCTCAGGCAAAGGTGGAGTGACGGAGTGTCTGAAATCAGCCTATTCCTGCTTTATAAAGGCATGTAACACCAAAGGGAAGAGGTTAGTGGACAGTTGCCACAACGCAGGCCTGCTTGCACATGACGGCCGAGCCTTGGAAAGCGGTCCAGACCCTGTGGCTGCTCGTCAGTACTACACAAAGGCCTGTGATGGAGGCTTTGCCCCAAGCTGCTTCAACTTGAGCGCCCTTTACATCCAGGGTTCAGCAGGAGTAGACAAAAACATGCCTCTGGCTCTGAAGTACTCCTTGCGGGCCTGCGACCTGGGCCACATTTGGGGCTGCTCCAATGCGAGCCGCATGTACAAAATGGGTGATGGCACAGACAAGGATGACCAGAAGGCAGAGGAGCTGAAGAACAGAGCTAAAGAACTGCATGGACAGCTAAAAGAGCGGCAGCTAAAATTTGGAGAGTGATGCGGAGAGAAAGAGCTGGACTTATGTTTTCATCTGTGTGTCTAgtgatgtgctgtgtgttgtaAAGGATGTAGGGAACAACGGGTGTGAGGAATATGGGTATTGTTTATCAGTGCCTGTGACACATCTGTGCTATTGCACTGATGATATGCATTTTCTAAACATAGCCTTTCTTTATCTACAGGTGAATACTGGCATTTTATTATGCCCTTAGCTTTGATTTCAGGGATATTGTGTGTCAGTGCATCTGGCAACAGTGCtaaagataataaagaaaaaacacaacacataaattaaacataatatttaataca

Function

NR:

description
cytochrome c oxidase assembly factor 7

GO: NA

KEGG:

id description
K18180 COA7, SELRC1, RESA1; cytochrome c oxidase assembly factor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259483.3 True 1317 mRNA 0.46 3 65246531 65249310

Neighbor

gene id symbol gene type direction distance location
echdc2 echdc2 coding upstream 22031 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 35026 65183357 ~ 65211505 (+)
LOC103041220 LOC108414547,LOC108258072,LOC107597850,LOC107721804,LOC107581484,LOC107658162,LOC107712838 coding upstream 99904 65107510 ~ 65146627 (+)
trnad-guc_6 NA coding upstream 171344 65075116 ~ 65075187 (+)
trnad-guc_5 NA coding upstream 171889 65074571 ~ 65074642 (+)
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding downstream 207427 65456737 ~ 65490821 (+)
LOC111191945 NA coding downstream 599817 65849127 ~ 65849762 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 605624 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 620038 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 641620 65890930 ~ 65902416 (+)
G30718 NA non-coding upstream 87267 65050824 ~ 65159264 (+)
G30726 NA non-coding upstream 165580 65076472 ~ 65080951 (+)
G30722 LOC108415433 non-coding upstream 187081 65057519 ~ 65059450 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding upstream 259225 64984478 ~ 64987306 (+)
LOC111190945 NA non-coding upstream 264130 64964312 ~ 64982401 (+)
G30763 NA non-coding downstream 121098 65370408 ~ 65371798 (+)
G30767 NA non-coding downstream 154212 65403522 ~ 65441108 (+)
G30771 NA non-coding downstream 180924 65430234 ~ 65432399 (+)
G30772 NA non-coding downstream 182149 65431459 ~ 65433073 (+)
G30774 NA non-coding downstream 197044 65446354 ~ 65446930 (+)
trnad-guc_10 NA other upstream 147169 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 147958 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 159751 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 199553 65022419 ~ 65046978 (+)
kit kit other upstream 976836 64231244 ~ 64269695 (+)
G31000 NA other downstream 579471 65828781 ~ 65837365 (+)
G31355 NA other downstream 1964995 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 2234025 67483335 ~ 67506898 (+)
G31407 NA other downstream 2247893 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 2442131 67691441 ~ 67844634 (+)

Expression


Co-expression Network