LOC103036329


Basic Information

Item Value
gene id LOC103036329
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39774602 ~ 39777033 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259845.3
TATGATCTAATAAAAAgcttattttagattttatgaaTGTTGTAACAAAACAACATGTAAGACATTAGGTTTTTAATTACACGGAGGAAACACTGGTTCAACTGGACTTCAGAATGAACTCAAGTCAAGATCAGATAATGGATATCACTCCTCTTTGCTATGAGTTTTCAAACACATCTTGTCCAAAGCATATTTATCCTGTACTTTTGAAGGTGGCCCTTTACTTGTTCTTCAGCTTAGTGGTGATTTTAACAGTATTGGGAAACTTGTTTGTCATCATAACAATTTTTCATTTCAAGCAGCTGCACATGCCAACTAACTTCCTGGTTCTGTCTCTGGCTGTAACTGATCTGCTGCTGGGTGGATTTGTGATGCCTCCCTGCATGCTACGTACTGTGGAAACTTGCTGGTATTTGGGCCCTTTATTCTGTAAAATACACGCCAGTGGGGGGGTTGTGATCATGTTGGCCACTGCTTCTATTATTAATTTGTCTTTCATATCAATTGACAGATATTACGCTGTGTGTAAACCTCTGATGTATCACAGTACAATCACCCCTTTTGTCacattaataatgattttaatcTGCTGGAGTGTCTCAATTTCAGTTGGCTTTGTAATAATATTTCTGGAGATCAACCTTCTGGGGGTTGAAGACTTTTACTATGAAAATATTGAATGCGAAGGAGGCTGTGTGTTATTTCAAAGCAAAACCTCAAGCACTTCTTCCTCTTTGCTTTCCTTTTATTTCCCAGGCATTGTGATGCTCAGTATATATTTGAAGATTTTCCGTGTTGCTCAAAAGCAAGCAAAATCTATTCAGGACTCAAAATCTAAAAAcagtgtgcaaaaaataagtaaagaagagagaaaagccACTAAAACTTTGGCCGTAATTTTGGGGGTATTTCTGTCACTTTGGACACCGTTTTTTATCTGCAATGTTATTAACCCTTTTATTGCATACTCAGTTCCTCCAGTACTGTATGACGCATTTGCATGGATTGGACTTATGAATTCAACCTGCAACCCTATTGTTTATGCTTTCTTCTACAAGTGGTTTAGAAAAGCATTTAGGATCATTTCATCTGGTAAAATATTTCAGCCAGGGTCTTCAAGAACTGATCTGTTTTCAAACTGAAACTGCATAAATGTAAGGAAATTAAAGGGAATTAAATTTTCAGAATTCAGAATTATTTTGTCAGGCCAGGTTTTCCAGCCAGGGTCTTCAAGAATTCATCTGTTTTGACATTGAAAACTATCCCCAtgaaaaaaatgtctaaatcAGACATTTGTAACATATGAACATTTTATTAGCTATACtgaaaaacactataaaaatattttaattaatatggaTATGTCACCTACAAATGGCTTATATAATATGAGCATGGGTCAGTAGTTTATCAGGTTGGCTAAAAGCCCATaagcaagattttttttttacattttctgataCAGCCGTCAGCTAATAATTACATTCTCACAAaattattaacttttatttttttaacttaactctttcataattatttattttatttatgtaacgTATCCAACAGATCATCATTAACTTATAAGTTAGTTACATTTGTGCTGggtattttgtcatttgtaaATCCAATATgaattcatttaatattttagtgattttgtggTGCAATAAAATGTGGTACATTTCTGATCTTTGTTGCTTCAACAGTTGTTTTGGATTATAAATAAAAGCGAAACAAATTTTGATCTTGTCAGATCACAGAACACGGTTCCAGTAATGTATGCTCTTGGACTGCTTGCCTTAACAAACTATTTGCATGTTTTCTTGCGCATCATCTTAAGAAGAGGCTCCCTTTCAGAACAATGGTCATGCAGAGTTGATGCTATATGTGCCGTATGGACTAGACACTGCAGGCTCCCCCGTTCCCCCCCACTTCTTCAAGCTCTGCAACAATGTTAGCAGTATTCATGCATCTATTTTCAAAAGCCAACATCTGGATATTAAGCTGGTGCAACTTGATCCTGGAGTAAACCAAGTTTTCAGTGCCTGTGAACCGGACATATGCTAATGAGAGCAGGGACAATATACAAATGCACTTCACATATATATGTTTctcttttctgtgtttctgtctgtgtttatgCTTGTAAGTATTTTCCCTGTTTCGCTTGAGGTGACAAATTATGGATTAATGGACTAATATCCATTAGTCGCACAGATTACTTCCTGGCTTGTCAAGTATTAGGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259845.3 True 2248 mRNA 0.36 2 39774602 39777033

Neighbor

gene id symbol gene type direction distance location
LOC103031261 NA coding downstream 7939 39765455 ~ 39766663 (-)
LOC103031565 NA coding downstream 17922 39755477 ~ 39756680 (-)
LOC103035909 NA coding downstream 22612 39750022 ~ 39751990 (-)
LOC111191823 NA coding downstream 39634 39733847 ~ 39734968 (-)
LOC111191820 NA coding downstream 46017 39727514 ~ 39728585 (-)
LOC111196293 NA coding upstream 16683 39793716 ~ 39795025 (-)
LOC103034967 LOC103034967 coding upstream 19365 39796398 ~ 39798840 (-)
LOC111196295 NA coding upstream 38484 39815517 ~ 39816850 (-)
LOC103038524 NA coding upstream 49885 39826918 ~ 39829162 (-)
LOC111191847 NA coding upstream 58305 39835338 ~ 39836641 (-)
G24964 NA non-coding downstream 42123 39724455 ~ 39732479 (-)
LOC111196215 NA non-coding downstream 250328 39514469 ~ 39524274 (-)
G24911 NA non-coding downstream 275136 39499043 ~ 39499466 (-)
LOC111196213 NA non-coding downstream 294258 39472824 ~ 39480344 (-)
LOC111191798 NA non-coding downstream 565337 39207480 ~ 39209265 (-)
G24992 NA non-coding upstream 42243 39819276 ~ 39825981 (-)
G24997 NA non-coding upstream 68340 39845373 ~ 39848209 (-)
G25128 NA non-coding upstream 606568 40383601 ~ 40421173 (-)
G25174 NA non-coding upstream 948766 40725799 ~ 40726362 (-)
G25173 NA non-coding upstream 949452 40726485 ~ 40728663 (-)
G24903 NA other downstream 316413 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 427686 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 449900 39309726 ~ 39324702 (-)
smim8 smim8 other downstream 847609 38925623 ~ 38926993 (-)
LOC103024598 LOC108411439 other downstream 851685 38887626 ~ 38922917 (-)
LOC111196341 NA other upstream 398229 40175262 ~ 40230868 (-)
G25265 slco5a1 other upstream 1437388 41214421 ~ 41218829 (-)
arhgap11a NA other upstream 1659008 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 2079062 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 2091991 41869024 ~ 41880424 (-)

Expression


Co-expression Network