LOC103031261


Basic Information

Item Value
gene id LOC103031261
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39765455 ~ 39766663 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259914.2
GCTTAATCATTCTTCATGTTTTCAGTTTGCCTTACTGGAAGAAAAGCATTCTTAACTGTTGGATTTCAGAATGAATTCCAGCCAAACTAATATTGTGGATATTACTCCTCTCTGCTATGAATTTGTAAATGGATCTTGTCCAAAGTTTGTCTATCCTGCACTTTTGAGGGTTTctctttatttgttctttacTGCAGTGGTGACTTTAACAGTGTTTGGAAACCTTTTTGTCATTGTAACCATTATTCATTTTAAGCAGCTGCACATGCCGACTAATTACCTTGTTTTGTCTCTGGCTGTGACTGATCTGCTTCTCGGTAGTGCTGTGATGCCTCCTTTCATGGTACAGTGTATTGATAATTGTTGGTATTTGGGCCCTGTATTATGCAAAGTATACAACAGTATTGTTATCATGGTGTGCACTGCTTCTATTTTAAATTTGTCATTTATATCTATTGACAGATACTATGCTGTATGTCATCCTCTGCAATATCAAACTAAAATCACCCCCTTTGTTACAGGAATAATGATTTTTATCTGCTGGATTGTCTCAGCGGCAGTTGGTTTTGTAATAATATTTCTGGAAATTAACCTCATAGGCGCTGAAGACTTTTACTATGAGCATGTTGCATGTGAAGGAGGTTGTGTCTTGTTCCAAAGTACAACATCAAGCACTTCTTCCTCTTtgctttctttctattttccaGGTATTGTAATGCTCagtatatatatgaaaatattccATGTTGCTCAAAAGCAAGCAAAGTCTATTCAGGactcaaaatgtaaaaacagtactcaatcaattataaaaaaagaggagaaaaaagccACCAAAACCCTGGCAACTATTTTAGGGGTTTTCCTTTCACTTTGGATGCCGTTTTTCATCTGTAATGTAATGAATCCTTATATTGGTTATGCAATCcctccaggttttttttttacacttgcaTGGATTGGATATATGAATTCAACAGTCAACCCTATTGTGTATGCTTTTTTCTATGCATGGTTTAGAAAAGCATTCAGGATGGTTTTATCAGGGAAAATATTTCAGCCAGGGTCCTCAAGAACaaatttgttttcacactgaaaaatatttacCCCATGACAAATGTCTGTTAATATGATCACAAAAAATATGCTATGTACTGAACTAAAAcaactgaaattatttttaaataaatgtatttagagGCAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259914.2 True 1209 mRNA 0.35 1 39765455 39766663

Neighbor

gene id symbol gene type direction distance location
LOC103031565 NA coding downstream 8775 39755477 ~ 39756680 (-)
LOC103035909 NA coding downstream 13465 39750022 ~ 39751990 (-)
LOC111191823 NA coding downstream 30487 39733847 ~ 39734968 (-)
LOC111191820 NA coding downstream 36870 39727514 ~ 39728585 (-)
LOC111194344 NA coding downstream 44733 39718689 ~ 39720722 (-)
LOC103036329 NA coding upstream 7939 39774602 ~ 39777033 (-)
LOC111196293 NA coding upstream 27053 39793716 ~ 39795025 (-)
LOC103034967 LOC103034967 coding upstream 29735 39796398 ~ 39798840 (-)
LOC111196295 NA coding upstream 48854 39815517 ~ 39816850 (-)
LOC103038524 NA coding upstream 60255 39826918 ~ 39829162 (-)
G24964 NA non-coding downstream 32976 39724455 ~ 39732479 (-)
LOC111196215 NA non-coding downstream 241181 39514469 ~ 39524274 (-)
G24911 NA non-coding downstream 265989 39499043 ~ 39499466 (-)
LOC111196213 NA non-coding downstream 285111 39472824 ~ 39480344 (-)
LOC111191798 NA non-coding downstream 556190 39207480 ~ 39209265 (-)
G24992 NA non-coding upstream 52613 39819276 ~ 39825981 (-)
G24997 NA non-coding upstream 78710 39845373 ~ 39848209 (-)
G25128 NA non-coding upstream 616938 40383601 ~ 40421173 (-)
G25174 NA non-coding upstream 959136 40725799 ~ 40726362 (-)
G25173 NA non-coding upstream 959822 40726485 ~ 40728663 (-)
G24903 NA other downstream 307266 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 418539 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 440753 39309726 ~ 39324702 (-)
smim8 smim8 other downstream 838462 38925623 ~ 38926993 (-)
LOC103024598 LOC108411439 other downstream 842538 38887626 ~ 38922917 (-)
LOC111196341 NA other upstream 408599 40175262 ~ 40230868 (-)
G25265 slco5a1 other upstream 1447758 41214421 ~ 41218829 (-)
arhgap11a NA other upstream 1669378 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 2089432 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 2102361 41869024 ~ 41880424 (-)

Expression


Co-expression Network