LOC103045102 (LOC103045102,LOC108427286,LOC106567973,LOC102213336,LOC101488131,LOC106603516)


Basic Information

Item Value
gene id LOC103045102
gene name LOC103045102,LOC108427286,LOC106567973,LOC102213336,LOC101488131,LOC106603516
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 11401516 ~ 11566079 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260368.3
agatttcagaccttaaccccattgagaatctttgggatgtgctggagaagacttgcGCAGCGGTCAGACTTTGCACAACCATCATCAATAATCAAAATCatggttattattatattatagtgtgtgacctttttttgctAAGGACATTTTTTGGACCAgacagtgtatataaaaaaaacacttgcttATGATGAGTCGTTTCACTTATGAGTCAGTTCAGACGGGTTCGTTTGAAAGAACCGATTCAAGTGAACGACTCGTTCGCGATTCGGACAGCGAGCGCCACTTCGCACGCGAACTTGACAGCAGCCTTCAGAAGCGACTCGCGCGCGTAACGGTCGCCAGGAGACTCAGACCGAGCGGAGGGGTTTGAGCGGGCGGGTGAGCGGAGTGTGTAAACAGGGTTCAAAGGCTGTATTTTGAGGGTGAAGAAGAAGCGGGGAGGATTTAGGAGTGTGTATCGGGGCTGTAGGGAGGTGTTTGTGTTCCGCCGCCTCGCCTGTTTTGTTTGTTGGTGTTGGCGTGTCTTTGTCCAGCACTTCTCTCCAGCGGTGAAGTCCCGCGGAGGAGCGGCTCGGCTCTCAGGCTGGATTTAACTAACTTCACTCAGtatttgaacaaaactcaaccTGTAGAAGATCACAGATGAGAGACCAATGACCGGGGCGCGCTGTTTACGCACTCCCACCCCTCTCTGAACGGATTTAACGCGGTTTTAAAACACGACTCTCTCTCGGATGTGACAGTTGTagttgtgagtgagtgagcgagtttTTGGACGGTGACTCTCCCGCGCAGTGAATGCGCTCCCAATGCATTCTCTGCTGCTGTCTCCAAAGAGTAAAGAAGCCGGGTTTGGGATCGACCTGTCTCCGGGCTCGGCGAGGATCATGTTCAGCTGTGTGGGATGTTTCTGGGTGCTCCTCTCCTCCGCCCTGGTCGCCGtctgcagcttcagcttcatTTCTCCCGCCTGGATCGTGAAGGACCACGGCCGGGGCGAGGACTCGGTCAGCTTCGGCCTGCTGTGGCACTGCTCTGAGTCTCTGGACCACATGTACCGCTGCTACACCTTCGGGGGTCTGGGCAGGTTCGCGGAGATCCCCTCCAGCTCCTGGCAGACGAGTGCAGTGCTCTGCTCTGGAGGTTGTGCGCTGCTGGCAGTCAGCTCCCTGCTGGCCATCATCACCATCTTCTTGCCCAGCGGTTCCTGTGAGAGGAGGATTTGCACGCTGGCCGGCTACATGCAGATGGCTGCAGTGTTCATCATGGCGTCTGGTCTGCTGGTGTATCCCTTTGGCCTGAACTCCAGCCTGGTCAAGTCCTTCTGTGGAAACTCTGATATCTACTATGCTGGAGAGTGCCAGATAGGCTGGGGATACATGCTGGCTATAGTGGGTGTGATGCTCACgcttttccttccctttttcgCCAAGTATGCACCCAAGGAGCAGCTGTCACCCACCCCGCTGCCCACGCTGTTATAAAATTGGAGTGCTTATGATTTCATGGAAATAGTTCTATCTGCATTTAATTGCAGATaaaccttttcttttattcttggttggtggtgatgatgatggtgatgtcaTTTTGGTGCCCAGAAGAGCCTTTGTTTTGCTTTCAGTGTGTGATGTGCTACATTGTCTTCCCTCATTTGATAAACTATCAATTTGTCGGGCATCccttataataaaaaatgttttttcgaAACATTATTTTGGGATTTAAAGTGAAGATGGGATGGAGTTTCCCCCCTCAGACTATAAACTAACCTATACTCCAGACTACATAAACCCAAAATGGAAACATcaaaactggattttttttgtaaagcaaCAGCAGGCAACACTGTTCGAACAGTGAATCCAACATTTTGAATAATCTCCTAACCCTTTTTTAAAAAGGGGTTTAAAAAAGACACGGTTAAATGTGAAGAATTCAATGACGAGGAGAAGCACCCGGACAAAAATCTGGGATTCATCACAAGGAACTTCAGAAGAAAAGCACGGGATATTCATAAATCTTTCATGTAATAATGAGTAATCCTTAACTAAAAAGGATAACTAAagaatacaacaaaaatattcTCTTTACGGATCTACTGACAATGGAGAACTTTACTGATTCTTCATTGATTATGTTGTTGGAAcaagttcttaaaaaaatggatttgggATGTCGAAGAAAATCTAAATGCTTCAACATTTTTGGAGATTTTGCCATACTTTTACAGTTGACCTAATGCAGTGTTGATCCAATATCTACAAACACTGTGGCTAAAGAGCTATGAGAAGAAGATAATAATAAACTCACTATCTGTATATGCCAGTTTCATTAATTGGTTTCCAAAAGTGTTCTAAtcaattttcttttatattaggGAGTGTGACTTCTCAGTGGACCTCCAAGCAGCAGCAGGACAACGGTGACTCAATTTCTTAATGAAACAAACCCCACAGCTACAGTACAGCCAGTCCTCTTAGGCACTAATCTTTCTTTGCCAACAaagttgtttaatatttaatgaccTGAAATTTGAAACCCCTGAAATCCTGCCATTACTTTTTAAGTGTTTCAAGAGGAAACTTGCTTGTCAAGGTCATGCTGTCTGTTTTGTACTTAACCCCTCCACTAAAACCAAATTCAGGATTTTCTGTAATCAGGAGAAAGGCATAGATATAAATACAATGTAAATCATAAAAATACACGAAGCTGGGCTCAGTCAACATTAAGACACTCTAGACGAAAACCCTTTCTGCCCTAACCAACTTGTGCCTTTTAACCATGACTAAAAAGACTTAAATTCCTTTTATCAGGTTATCTACTTCTGCTGAAACTGTGGTTTTGTAAATGcttccttgtttattttccaCTGTGTTGTGCATTTCTGCATCTGTCTTGGGTTGTTATAAATGAAAAGAGGGTTGTTTCTGTTGTAAATCATCCATACTGTACAGCAACTTCACATTAAGCAGGTGTGTTATAATGCTTTGAAAAAATAGACAGACTGTAATGTAAAAAGGGCGCAATGACAAGTGTTCAACCaaggaaaggaaaaaatgtTGTGAAAGGAGAGAACAGAACAAAAGGGCAAGACTCCATAAACAGCCAAGACAAATAAAATGTCCCTGCCTGTATCATAAAACATCTGTCtgttactaaaaatattttagttaaaaaacgAATGAACAGGTGAAGTATTACATTAGTAATACTgctttttacaaaaacaaacaaaaagaagatCTTCAATGCTCAAAACCTTTACGAGTTGAACCTAgccctttttcattttctgttgaTACCTTCCTGTGTAATGTGTTCAGAGTGGTTAAAGGAGTAAAGCCACTGAGCTATGTTCCTACCATTCTTTCATTAATGTGACTAAGCATGCAGTGACATGACTCTGAACAAAGCCAGCTGAACAAATGATTTCCTCAAAGTGTGAGTAAGTGTATGCCTTTAAACCtttgatgttttatgttttgctcttttgttttttgctaaaACTTACACTGCTTGCCTGTGTATGTTGAGGGACTGTCTTAAGAAGGCACTAATGAACATCAAAAGATCTTTTTctgaagagaaacaaaaagtatGTAGTTGTGCAGAAGTTCCCAGACTGTGCTCAGATGATGCTGTAATTATAATAACCCTAGGCACAGGGATCCCTTTGGTCTGTAATAATGTATGTGAAATCTGATCACGCATTACGGATTCTGTAGAGTAGTTGTGTGGTTTTGGCTGTAAATAATTATGTAAGATGGCTGTTCATGCTGAAAAGATTGGTCCCCTTTTTAAAAGCTATATTTTGGGATATTACCTCattaatgtgtttgtttaacCCTTGACCCTCAACAAGACTTGCTGTTAAATGTTTGCCctttgtaataaaatgtttcCATAACAAAAAA

Function

NR:

description
transmembrane protein 211-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260368.3 True 3920 mRNA 0.42 3 11401516 11566079

Neighbor

gene id symbol gene type direction distance location
LOC103046022 NA coding downstream 13911 11381002 ~ 11387605 (-)
aspa aspa,LOC107665049,LOC107712162,LOC107595485,LOC107731059 coding downstream 31134 11347655 ~ 11370382 (-)
LOC103044364 LOC108412379 coding downstream 449417 10884853 ~ 10952099 (-)
LOC103029242 LOC103029242,LOC108414971,LOC108256685 coding downstream 1061327 10329090 ~ 10340189 (-)
LOC103028097 tnip3 coding downstream 1123183 10267658 ~ 10278333 (-)
akap10 akap10 coding upstream 1885 11567964 ~ 11588327 (-)
LOC103044795 ehd2a,LOC108427007,LOC108260244,LOC107595479,LOC107685737,LOC107712157,LOC107740518,LOC107587717 coding upstream 30289 11596368 ~ 11606026 (-)
LOC103043164 LOC103043164,LOC108428299,LOC108259900 coding upstream 54130 11620209 ~ 11625691 (-)
LOC103042846 NA coding upstream 64709 11630788 ~ 11636218 (-)
sympk sympk,LOC107681888 coding upstream 72652 11638731 ~ 11650550 (-)
G17929 NA non-coding downstream 254108 11146405 ~ 11147408 (-)
G17921 NA non-coding downstream 340621 11050256 ~ 11060895 (-)
G17859 NA non-coding downstream 546445 10854626 ~ 10855071 (-)
G17845 NA non-coding downstream 857909 10540478 ~ 10543607 (-)
G17808 NA non-coding downstream 1058253 10342796 ~ 10343263 (-)
G18085 pex12,LOC107681885,LOC107710733,LOC107587685 non-coding upstream 213953 11780032 ~ 11781320 (-)
G18087 NA non-coding upstream 220153 11786232 ~ 11786601 (-)
G18114 NA non-coding upstream 313673 11879752 ~ 11880042 (-)
LOC103023588 NA non-coding upstream 397945 11964024 ~ 11970718 (-)
G18154 NA non-coding upstream 569341 12135420 ~ 12135738 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other downstream 66998 11085480 ~ 11334518 (-)
LOC107197924 NA other downstream 317717 11076238 ~ 11083799 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other downstream 321332 11016029 ~ 11080184 (-)
G17792 NA other downstream 1154198 10246675 ~ 10247318 (-)
mak mak other downstream 1392365 9995145 ~ 10009151 (-)
G18037 NA other upstream 118908 11684987 ~ 11685391 (-)
orai2 LOC103026696,LOC108428392,LOC107685638,LOC107595471 other upstream 215433 11781512 ~ 11796151 (-)
LOC111191510 LOC108414110,LOC108437066,LOC108442041,LOC108437065 other upstream 1201020 12767099 ~ 12780581 (-)
fxyd2 NA other upstream 1245097 12811176 ~ 12816601 (-)
G18371 tagln,tagl,LOC108437045,LOC103026775,LOC108437046,LOC107749469,LOC107700246,LOC107548469,LOC107746372,LOC107710578 other upstream 1369222 12935301 ~ 13007435 (-)

Expression


Co-expression Network