slc25a24 (slc25a24,LOC108439838,LOC107553450,LOC107732372,LOC107698372,LOC107696157,LOC107726490)


Basic Information

Item Value
gene id slc25a24
gene name slc25a24,LOC108439838,LOC107553450,LOC107732372,LOC107698372,LOC107696157,LOC107726490
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44202119 ~ 44219005 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015604841.2
TTACTAGAGTGAGATCTGCAGCTCGATTTAATCATCAATATCCGGCGATAACCCAGAGTTTACCGAGATAATACAGGACAATGCTGTTTCTACAGAGGACTTTAAGGCTTTGATGAAGTAGTTACTATAGCTGCGCTAGTCTCTCAgtgcttatttgtttttttatccccTCCTCAGTTTTCAGTCCTTCGTTTTTCGCTCCTATCAGCCAGTCTAAACTCAGAAACAGCCATGTATCAGGTCCTGAGGAATTTCTTCTTCACCAAGGCTCACTGCGCCGCTGAAGACGCCACGAAGAACTTCGAGAAGCTGTTTGAGAAGTTGGACGTGAATCGGGACGGGAAGGTGGATGTGGCGGAGCTGCGCGCAGGCCTGGCCGACTTGGGCTTCACTCTCGGCGCAGACGCAGCTCAGAAAATAGTTTCATCTGGGGACTCAGATAAGGATGAGCAGCTGGACTTTTTGGAATTTTGCAGCTACTTACAGGAGCATGAGAAAAAGCTCAACCTCACCTTTAAGAGTCTAGACAAGAACAATGATGGAAGCATTGATTACAGGGAGATTCAACAAGCACTCAAAGACCTGGGCGTGAATATCTCAAAGGAAAATGCGGAAAAGATTCTTAAAAGCATTGACGCTGATGGCACCATGTCAGTGGATTGGAATGAATGGAGGAATCACTTCCTCTTTAACCCAGCTACCGACCTGGAGGAGATCATACGCTACTGGAAACACTCCACTGTGTTGGATATAGGGGACAGTCTCACCATCCCAGATGAGTTCACAGAGGAGGAGAAGACCACTGGCCTGTGGTGGAAGCAGCTGGCAGCCGGGGCGATGGCGGGGGCAGTCTCTAGGACAGGCACTGCACCGCTGGACAGAATGAAAGTCTTCATGCAGGTTCATTCTTCAAAGTCCAACAAAATCAGTCTGGTCAGTGGATTTAAGCAGATGATCAAAGAGGGTGGTGTTGCATCTTTGTGGAGAGGAAACGGTGTCAATGTCATAAAAATTGCTCCAGAAACCGCCATCAAATTCATGGCCTATGAGCAGTATAAGAAACTGTTGTCCAAGGAGGGAGGGAAGATCCGGACACATGAGAGGTTCATGGCAGGCTCCCTGGCTGGAGCCACAGCACAGACTGCCATTTATCCCATGGAGGTGATGAAGACCAGGCTTACGCTGCGAAAGACCGGCCAGTATTCAGGAATGTTCGACTGTGCCAAGAAAATTCtaaagaaagagggagtgaAGGCCTTTTATAAAGGCTATGTCCCCAACATCCTGGGCATTATTCCATATGCAGGAATTGACCTGGCCATCTATGAGACCCTGAAAAATACCTGGCTGTCTCTGTATGCCAAAGACACAGCTAACCCTGGTGTGTTGGTTCTGCTGGGCTGTGGAACCATCTCCAGCACATGTGGTCAGCTGGCTAGCTATCCCCTCGCCCTGGTCCGCACACGGATGCAGGCCCAAGCGTCTATGGAGGGCGCGGAGCAGGTATCGATGTCAAAGCTAGTGAGAAAGATCTTGGAGAAGGAGGGCTTTTTTGGCCTTTACCGTGGAATCCTACCCAACTTCATGAAAGTGATTCCTGCCGTCAGCATCAGCTACGTGGTGTACGAGTACATGAAAACAGGCTTAGGCATATCtaagtgaggtgtgtgtgtgtgtgtgtgtgtgtgtataagtgtgtgtaggtgGAACATGTGTGAGTGAATTCTAAAGTGTGCATGTTTGGCTGATGTGGTGGTAAAAGTGGTGGGAAGCTTCATGAGCCAAAGTATATTTCCGAAGTCACCGACATCAGGAAGGTGTAGGTGTACATCTTTAGTCATCCAatactgtgtgtaactgttcaGGAAAAGTCAAAGAGAAGAACGTATTTTAGTA

Function

symbol description
slc25a24 Predicted to enable ATP transmembrane transporter activity and calcium ion binding activity. Predicted to be involved in several processes, including ATP transport; cellular response to calcium ion; and cellular response to oxidative stress. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrion. Predicted to be integral component of membrane. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; hatching gland; periderm; and polster. Orthologous to human SLC25A24 (solute carrier family 25 member 24).

NR:

description
calcium-binding mitochondrial carrier protein SCaMC-1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015604841.2 True 1896 mRNA 0.48 10 44202119 44219005

Neighbor

gene id symbol gene type direction distance location
kifap3 kifap3,LOC107726482,LOC107732413 coding downstream 220755 43946979 ~ 43981364 (-)
LOC103035417 NA coding downstream 485921 43709728 ~ 43716198 (-)
LOC103035096 NA coding downstream 498150 43688898 ~ 43703969 (-)
LOC103034775 NA coding downstream 529129 43666847 ~ 43672990 (-)
LOC103027377 LOC108416125,LOC101075333,LOC106560396 coding downstream 537317 43599657 ~ 43664802 (-)
LOC103039281 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107726431,LOC107698369 coding upstream 37446 44256451 ~ 44263193 (-)
LOC103040630 znf395 coding upstream 79942 44298947 ~ 44308698 (-)
LOC103028959 NA coding upstream 92249 44311254 ~ 44317837 (-)
LOC103041948 LOC108439850 coding upstream 102698 44321703 ~ 44324457 (-)
LOC103042571 stmn4,LOC108439832,LOC108257558 coding upstream 141094 44360099 ~ 44367840 (-)
G26083 NA non-coding downstream 3641 44195249 ~ 44198478 (-)
G26038 NA non-coding downstream 145820 44054940 ~ 44056299 (-)
G26032 NA non-coding downstream 164282 44037302 ~ 44037837 (-)
G26031 NA non-coding downstream 166362 44035527 ~ 44035757 (-)
G26025 NA non-coding downstream 186771 44015140 ~ 44015348 (-)
G26084 elp3,LOC107732362,LOC107698368,LOC107553498,LOC107696156,LOC107599080 non-coding upstream 2008 44221013 ~ 44224273 (-)
G26154 NA non-coding upstream 158318 44377323 ~ 44377527 (-)
G26158 cdc42bpb,LOC106607646 non-coding upstream 222656 44441661 ~ 44444962 (-)
LOC111197214 NA non-coding upstream 395205 44614210 ~ 44615581 (-)
G26238 NA non-coding upstream 464183 44683188 ~ 44688822 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 302359 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 523257 43675025 ~ 43678862 (-)
LOC103027084 LOC108416115,LOC103358919 other downstream 684962 43495419 ~ 43517157 (-)
G25785 NA other downstream 1090718 43098822 ~ 43111401 (-)
G25678 NA other downstream 1483730 42717666 ~ 42718389 (-)
fkbp1b fkbp1b other upstream 550259 44769264 ~ 44799505 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 637094 44856099 ~ 44870690 (-)
G26295 atad2b,LOC107697175,LOC107603081 other upstream 663773 44882778 ~ 44885801 (-)
G26388 NA other upstream 1217104 45436109 ~ 45437585 (-)
G26588 NA other upstream 1716148 45935153 ~ 45935622 (-)

Expression


Co-expression Network