LOC103041527 (LOC103041527)


Basic Information

Item Value
gene id LOC103041527
gene name LOC103041527
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64848648 ~ 64856825 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015608428.2
TCCTTTAACTTCAGCCCAGCTGCACATAACAGGCAGACACTTGTGATATACACTCACAGGCAGAAGTTTTCCTTACAAGTCCAGACATgatttttcagtatttattgGAACTTAGCTTTTCTAGCTGGTTGATAGGAATTTTTCTGGTTCTGCTGCTTATTGacttaatcaaaaataaaaatcctccCAGCTTTCCGCCAGGACCGCGACCTCTGCCCTTTGTTGGAAATATCTTCAGTGGCCTTGACTTCCCAACTATAGACAagCTTGCTGACAAGTATGGAGAGGTTTTCAGTCTGAGATTGGGCTTTGGAAAAACAGTGTTTGTCTCTGGATACAAAAATGTGAAGGAGGCCCTTGTCATGGACACCTTTGTTGATCGTCCTGATGTCCCCTTGTTTTACAAAATCTTCAAGGGACTTAGTGTAGGTGTGAGTAATGGGTACCTGTGGAAGATGCAGAGGAAGTTTGCCATCACTCACCTGCGACATTTTGGTGAGGCGAAGAAGGACCTTGAGCTAAGCATGCAACAGGAGACCACGTTTCTGTGTGATGCTTTCAGAGATGAAAAGGGCCCTTTTGACCCTCAGATCTACTTGAACAGCGCAGTATCAAACATCATCTCTGCACTAGTATTCGGACATCGCTTTGAATACCACGATGAGCATTTTTATAATATCTTGCGTTTGGACACTGAAGCCATCTCACTGGCTTTCTCTGCTGGGGCTCAGCTGTACAATTTCTTCCCAAGCCTCTTTGAGCATCTGCCTGGCACTCACCAGAAAGTGTTCTCCAACTATAATAAGATTACAAGCTTTATAAGTGATGAAGTCAAAAAGCACAAGGAAAAGTTCGATCCTTCAAACCCACGGGACTACATTGATGCTTTCCTACTAGAAATTGAGAAGAACAATGACCCAGATGCCGGCTTTAACATTGAGACATTAATAGTGTCCTCCTTGGAGATGTTTGAGGCGGGGTCAGAAACTACAGCCACTACATTACGATGGGGTTTTCTTTACATGATGAAATACCCTGAGATACAGAaaaaagtaCAGGAGGAGATAGACAGAGTGATCGGACAGTCACGTCAACCCTGCATGGCCGACAAACCCAACATGCCCTACACTGAAGCTGTCGTTCATGAAATACAAAGAGCAGGCAATGTTATTCCTCTGGGTTTCCCCAAAAAAGCCATTAAAGACACAACACTGGGAGGATACTTCATACCAAAGGGCACGTCTATGGTTGCTAACCTGACCTCTGCCCTTAAGGACAAAAACGAGTGGAAAACACCCGACACCTTCGACCCAGAAAACTTTCTGGATGATCAGGGACAGTTCCGCAAGAGAGGCGCCTTTTTACCCTTTTCAGCAGGTAAGAGGGTGTGTGTAGGGGAATCTCTGGCCCGCATGCAGCTCTTCTTGTTCTTCACCGCCCTGCTGCAGCGCTTTACGTTGTCCCCAGACCCTGGAGTGAAGCTGAGTCTAGAGGGCCTGATGGGAATTACGTACGCTCCCCATCCCTACCGCATGTGTGTGACTCAACGTTAAATAATGTGGTataataaaacgtttttttttttaagaatgctttaatatacactatatgtacaaatgtttgtggacgctACGTCTAATGCATGTTCTTAGTTACTTTGAGAGTTCCTGACACATATGAGTAAATGTACTGTGGCTTTTCTGGGCACTGAAATAAAAGTGTTGGCAATTTGTACCAAGCCAAGTTCAGGCCACATGGATGTAAACACCCAGGACTGAGCTATGGAGCTAAAGTACTGGTGTAATGGTGGTCCAATGTATGTGCATAAATTCTCAGATATGATCTAATATTAGCACTAAACATTCTCTTTATGTTCACTAAACTTTCTAAACTTTTGCTTGgtgtgtatatttaatttatccTAGCTATTTGGGATAAGTAAGccaaaacaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaatgtactcATGGAGACAGTAGTTTATTTGAACTTTTAAAATGATCCTTGCatatttgggatcagaaggacctAATTGGTCTAAAAACAA

Function

NR:

description
cytochrome P450 2J2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015608428.2 True 2075 mRNA 0.42 9 64848648 64856825

Neighbor

gene id symbol gene type direction distance location
LOC111190912 NA coding upstream 14571 64826695 ~ 64834077 (+)
LOC103041822 NA coding upstream 38315 64803224 ~ 64810333 (+)
LOC103042125 NA coding upstream 98939 64742654 ~ 64749709 (+)
LOC103042444 NA coding upstream 106408 64731659 ~ 64742240 (+)
LOC103037884 paics,LOC108415209,LOC107555752,LOC107556158,LOC108257759,LOC107721365,LOC107683924,LOC107665310,LOC107737306 coding upstream 120347 64712173 ~ 64728301 (+)
LOC103036008 LOC103036008,LOC108415307 coding downstream 2505 64859330 ~ 64868413 (+)
LOC103035382 LOC108415267 coding downstream 13026 64869851 ~ 64876715 (+)
LOC103035066 NA coding downstream 24113 64880938 ~ 64890653 (+)
LOC103034427 NA coding downstream 69710 64926535 ~ 64934468 (+)
mmachc mmachc coding downstream 204999 65061824 ~ 65067398 (+)
G30646 NA non-coding upstream 15811 64720955 ~ 64832837 (+)
G30643 NA non-coding upstream 24499 64811379 ~ 64824149 (+)
G30644 NA non-coding upstream 25989 64730064 ~ 64822659 (+)
G30664 NA non-coding upstream 56849 64789121 ~ 64791799 (+)
G30652 NA non-coding upstream 73670 64752233 ~ 64774978 (+)
G30683 NA non-coding downstream 35573 64892398 ~ 64909454 (+)
LOC111190945 NA non-coding downstream 107487 64964312 ~ 64982401 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding downstream 127653 64984478 ~ 64987306 (+)
G30718 NA non-coding downstream 193999 65050824 ~ 65159264 (+)
G30722 LOC108415433 non-coding downstream 200694 65057519 ~ 65059450 (+)
kit kit other upstream 578953 64231244 ~ 64269695 (+)
G30362 NA other upstream 1502955 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1917515 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 1995360 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2912565 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 165594 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 220955 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 241677 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 242466 65099291 ~ 65099362 (+)
G31000 NA other downstream 971956 65828781 ~ 65837365 (+)

Expression


Co-expression Network