LOC103032515


Basic Information

Item Value
gene id LOC103032515
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39668510 ~ 39669815 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015608501.2
AGAAAATTACTCTCTATTATTAGTGACAGCTTTAAATAAGCCAataatactatactactattTTAATAGGCTATACTTTCCTATGTGTTATAATCTATTTTCTGGctaataattttgtttttgatttttttcctgTGGAAAACCATATTTAAGTGGATAGATTGGACTCCCTCATTATGAATCTCACTGatgctgctgcagacaatgtgCTCCTCTGCTTTCCGCACCTGCCTGACTCCTGCCCCAGAGAACATCGTTTTCTTGTGCTCAAAGTAGTCATGTACTTTTTAACGCTTGGTACTATTCTTATGACTGTTTTGGGGAACTTTTTGGTCATCATaacaatttcttattttaaacagCTTCAGTCTCCCACCAACCTCATCATCCTCTCCATGGCCTTAGTGGACTGTATGCTGGGCTGTTTGATTATGCCCTTCAGTTTGGTGCGATGGTTGGAACGCTGCTGGTTTTTGGGAGAGATTTTCTGTCAAATACATTCTGGATTAGACATGACCCTCAGTATAGCCTCTATACTGCACTTGTGTTTGGTATCTGTAGACAGATATATGGCCATTTGCGATCCTCTGAGTTACAAAATGAATGTGACAAATTTCAGCGCGGCAGTGTGCATTGCTGTCATATGGCTGTTTTCTGTCACGTTTAGCTTCGGAGTTGTTCtgtctaaaataaacattgtaggTCTGGAGGAGCTTTTAATGCAGGCTGCATGTGTTGGAAGCTGTGCTTTGATTTTTAACAGACAGTGGGGTGTTATAGTGTCACTTGTTGCTTTTTTTGGTCCGGGAGCTGTCATGAGCGCTCTGTACCTCAAGATCTTTCACGTTGCAAGAAAACAGGCTAAAATAATGTCTGAAAGGTCAACTGTGAGACAgactaattcagaaactaagGCCCATTCATCAGAACACAGGGAGAGAAAAGCAGCTAAAACTCTTGGAATTGTCATGGGCATTTTTCTACTTTGTTGGCtgccattttttattgttacaatAACTGatccattccttaatttctcAACCCCAATAGATGTTTTTGATGCACTGGTCTGGTTTGGGTACCTTAATTCAACCTTTAACCCCTTGATCTATGGCTTTTTTTATCCCCGCTTTCAGAGAGCATTTAAGATCATCATATCAAAAGTTCTACACctcaataatgcaaataatttattactttaattCCTGTTTCACAGTTAGTCAAAGAAGAATGAAGGAATGATgtacaatacatttaatgaataaaattgtATTGCTATCACttattaaaataagataaacttAAA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015608501.2 True 1306 mRNA 0.38 1 39668510 39669815

Neighbor

gene id symbol gene type direction distance location
LOC103042020 LOC108432804 coding upstream 240739 39412683 ~ 39427771 (+)
LOC103043278 LOC103043278,LOC108432833 coding upstream 300217 39365807 ~ 39368293 (+)
LOC103045608 LOC108411441 coding upstream 446274 39214181 ~ 39222236 (+)
rars2 rars2 coding upstream 496555 39155626 ~ 39171955 (+)
LOC103047239 cf166,LOC103047239,LOC105017858,LOC100499587 coding upstream 515082 39147532 ~ 39153428 (+)
LOC103036628 NA coding downstream 24838 39694653 ~ 39697487 (+)
c3h6orf58 NA coding downstream 315330 39985145 ~ 39992197 (+)
cspp1 NA coding downstream 641126 40310941 ~ 40319844 (+)
prex2 prex2,LOC107741010,LOC107686687,LOC107758281 coding downstream 836601 40506416 ~ 40726249 (+)
c3h8orf34 cunh8orf34,LOC103047203,LOC106909367 coding downstream 1061572 40731387 ~ 40903436 (+)
G24837 NA non-coding upstream 15491 39648388 ~ 39653019 (+)
G24834 LOC108432800 non-coding upstream 29906 39637403 ~ 39638604 (+)
G24833 NA non-coding upstream 41817 39621853 ~ 39626693 (+)
G24815 NA non-coding upstream 138247 39526486 ~ 39530263 (+)
G24796 rad51 non-coding upstream 229508 39436982 ~ 39439002 (+)
G24978 NA non-coding downstream 175555 39845370 ~ 39848248 (+)
G24981 NA non-coding downstream 176994 39846809 ~ 39847260 (+)
G25021 NA non-coding downstream 322886 39992701 ~ 39994485 (+)
G25024 themis non-coding downstream 334358 40004173 ~ 40013801 (+)
G25142 NA non-coding downstream 825201 40495016 ~ 40495230 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 270632 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 327539 39325083 ~ 39340971 (+)
G24719 NA other upstream 622729 39045170 ~ 39045781 (+)
G24583 NA other upstream 721288 38939357 ~ 38947222 (+)
G24594 smim8 other upstream 741528 38925696 ~ 38926982 (+)
G24972 NA other downstream 149461 39819276 ~ 39825718 (+)
G25601 NA other downstream 2721825 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 2827907 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 3589805 43259620 ~ 43262099 (+)
rps29 NA other downstream 3690654 43360469 ~ 43363444 (+)

Expression


Co-expression Network