LOC103032818


Basic Information

Item Value
gene id LOC103032818
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39665304 ~ 39667079 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015608503.2
CTTGGATGCACATAAAAAGAACAGTTTTAGctgttaatgtttattttgtggaataacacATCCGAAAGCCTTGAATGGACTCCCTCATAATGAATATGACTGCTGCAGAAAATGTGCTCCTCTGCTTCCCTCACCTGCCTGACTCCTGCCCCAGAGCACACCGATTCCTTGCGTTCAAAGTGATCATGTACTTTTTAATGATGGCTAGTATTCTAATGACGGTCTTTGGGAACTTGTTGGTCATCATcacaatttcttattttaaacagCTTCAGTCTCCAACCAACCTCATCATCCTCTCCCTGGCTTTGGTTGACTGTTTGTTGGGCTGTATGGTTATGCCCTTCAGTTTGGTGCGATGGTTGGAACGCTGCTGGTTTTTGGGAGAGATTTTCTGTCAAATACATTCTGGATTAGACATGACCCTCAGTATTGTCTCTATACTGCACTTGTGTTTGGTATCTGTTGACAGATACATGGCCATTTGTAAACCACTGAGTTACAGAATGAAAGTGACAAAtggcagtgtgtcagtgtgcaTTGCTGTCATATGGCTGTTTTCACTTACATATAGTTTCGGGGTTGTTCTGTCTAAAGTAAATGTTATAGGTCTGGAGAACCTTTTAGTACAAGCTCCGTGTGTCGGGAACTGTGCTTTGATTTTTAACTTACAGTCAGGAATTTCTCTTGCACTTGTTGGATTTTTTGTTCCGGGAGCTGTCATGACCACTCTGTACCTTAAGATCTTTCAAGTTGCAAGAAAACAGGCTAAAATAATGTCTGAAAGGGCAACTGTGAGACAGACTAATTCTGAAACAGCAGTCCATTCATCAGAACACAGGGAGAGAAAAGCAGCTAAAACTCTTGGAATTATCATGGGCATTTTTCTACTTTGTTGGCTGCCATTTTTCTTAGTTACTCTAACTGATCCACTGCTTGGGTTTCCTACACCATTAGATGTTTTTGATGCTCTGGTCTGGTTTGGGTACCTTAATTCCACGTTTAACCCCTTGATCTATGGCTTTTTTCATCCACGCTTTCAGAGAGCATTTAAGATCATCATATCAAAAGTTCTACACctcaataatgcaaataatttattactttaattCTAATTTGTCTTATTTCAcagacaggaatgagttttACATATTTAGTCAGTTACTCAGTATATTGGAAGGGGAAAACATTATACAATCCATGGATAACTTaggaacattgttattttaatcaCTATAACACATATAACACCATAAAAGGACAAAACTTAGAAATGCCTATTCTTCCACAAATCTTCATATTTCGTAAATGTGAGTGCTGTGTAATGTTTTATACAGACATATTGCAACAGTGACAGAAATAATAACCGTATACGCTTGATGAATTTAGGGATTAAGcaaagaacataaataaaaacaaactctGGCCCAATTGTAGACTTACCTTTACCTTTAAGTGAAGGCAGACATTGCATTTGACGTGTAAACTATTAGACGtgtaaactataaaatatattttaaaagtaaatgtacagCACTGTGAATGCCTGATTTTCATTTGTCAGAAAGAGCCTTTCTTGCTTGAATTTGTAGCCATGTATGTATTTTACAGCTGAAATGTTCTATTCCTGTTCTTTTTTCTGGTTCTGTTTGTCATCCACATTCaatggattatttttttctctttatttctttatttgtttatcttataTTActtaactttaaataactttaaacacACTGGATGTCTGAGGACAAGACAAACAGTACAATACAA

Function

GO: NA

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015608503.2 True 1776 mRNA 0.37 1 39665304 39667079

Neighbor

gene id symbol gene type direction distance location
LOC103037563 LOC108432817 coding downstream 2988 39659836 ~ 39662316 (-)
LOC103037243 LOC108432794 coding downstream 7858 39656134 ~ 39657446 (-)
stx7 stx7 coding downstream 12243 39640238 ~ 39653061 (-)
LOC103038198 LOC108432800 coding downstream 26573 39637361 ~ 39638731 (-)
LOC103038525 NA coding downstream 35084 39629136 ~ 39630220 (-)
LOC103036931 LOC103036931,LOC108432867,LOC108274078 coding upstream 24899 39691978 ~ 39693182 (-)
LOC103035296 LOC108432792 coding upstream 32213 39699292 ~ 39700706 (-)
LOC103035599 LOC103035599 coding upstream 37049 39704128 ~ 39705844 (-)
LOC111194344 NA coding upstream 51610 39718689 ~ 39720722 (-)
LOC111191820 NA coding upstream 60435 39727514 ~ 39728585 (-)
LOC111196215 NA non-coding downstream 141030 39514469 ~ 39524274 (-)
G24911 NA non-coding downstream 165838 39499043 ~ 39499466 (-)
LOC111196213 NA non-coding downstream 184960 39472824 ~ 39480344 (-)
LOC111191798 NA non-coding downstream 456039 39207480 ~ 39209265 (-)
G24860 NA non-coding downstream 477026 39187782 ~ 39188278 (-)
G24964 NA non-coding upstream 57376 39724455 ~ 39732479 (-)
G24992 NA non-coding upstream 152197 39819276 ~ 39825981 (-)
G24997 NA non-coding upstream 178294 39845373 ~ 39848209 (-)
G25128 NA non-coding upstream 716522 40383601 ~ 40421173 (-)
G25174 NA non-coding upstream 1058720 40725799 ~ 40726362 (-)
G24903 NA other downstream 207115 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 318388 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 340602 39309726 ~ 39324702 (-)
smim8 smim8 other downstream 738311 38925623 ~ 38926993 (-)
LOC103024598 LOC108411439 other downstream 742387 38887626 ~ 38922917 (-)
LOC111196341 NA other upstream 508183 40175262 ~ 40230868 (-)
G25265 slco5a1 other upstream 1547342 41214421 ~ 41218829 (-)
arhgap11a NA other upstream 1768962 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 2189016 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 2201945 41869024 ~ 41880424 (-)

Expression


Co-expression Network