LOC103029242 (LOC103029242,LOC108414971,LOC108256685)


Basic Information

Item Value
gene id LOC103029242
gene name LOC103029242,LOC108414971,LOC108256685
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 10329090 ~ 10340189 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015608547.2
GTGGCATCGCGATGGTTTCCATCCATCGCAatgttgggtcataaatgaGGATGGACGATGATATCATCCATCTGCACAACCCTATTTCTTGCATATTAATGTTGATGGGCCCcctagctaaattcgccttgagcccccaaattgctaagtccgccactggTTCTTTGTGAAGAGCACTTTCTTTGATATGTACACCATTGTTATTCAGTGTTCTACTGACGATGGACTTGAACATTTCCTTTAGTCAATGTGAGAAAGACTTAAAGTTGCTTATGTGATCCTAAAGGGTCACACACTTTTACCACTCTTGGGCATGTAATATTGGATGATTTTCCTAATATTGTGTCTCATTTTGTTTGGAAAGTACACTGTAtattatggaagcccatttctgACACAAAAAGGGGGGTCCTCCTATAAGTCATAATAATGAgacagtaagtcattattattagATACTAAATCAAGAggatctcataattatgacttagtttcTCCTTATAATGACCTATAGGATCCAATATTTTTCAAATCTTCCATATGTAGCCTgtctaaaatctatttttaccACAGTACACTGTATATAGCCTACTTAACCTTACATAGTATACTGTTAGTTGTAATGTAGTAGGAAAGGGGATATGGAATAAAACACAGCCTTTGTAACTGTGCATGTACTTTCCAACTGAAAATAGATGCATTCTTGACAAATTGAATATACCCCTCCTGTGTGCGCAGATACCGCCCATTGTAATTAAAGTCATGAGCGcctgtctatgtgtgtgtgtgtgttcttccgGAGGCACAGCCATGCTTTTAACGGTTATGTACTACTAAAACATGTAGGAGGATACCTCTCAGTATATCTGAGAATAGTTTAATTCTGCATAGAGACAGAGGCAAAAACGCCCCTGATCCTGTGATCATTAGAAAATGAGCAAGTCTTCAACGCCGTCCTCTAAAGACCTACCATAGGTTTGCCATGGAGGTATAATGTGTATTTCTCAAAGTCTATGTGGTTGGAGGGCAGGAAATAGACAGTATGATTTTGGgACTTGTCATCATTCTGTTCCTCATTGGCCATGGAAACACTGGGCCTGGAACAACCCCTCACCTAAAACACATTGTGATTGGACGATGTTATGACTATATCACTCTGGTGAACCCAAGCTTCAGGTACAACTGTGAAGATATCTGGCGGGAGTTTGAGGAGGCAGTGGTGAGGAGGACACCATGCAGTGTGAGGGTGAAGGACTACCAGAGAATGTTCCGGGCAGTCCCTCAGACTCTTCCCTGTGACAGAcTGCTGTTCTGGAGCAAGACTCGGGACCTGATGCACAGCTATGCAGCCGTCACAGGAAGGTTCTGGACTTTAGAGGACACGCTGGTGGGATTCATTTTTAATGATCTCATCTGGTGTGGGCagcgcgagagagacagagGATTTGATTTTCAGTCCTGTCCAGAGTGGTCAACATGTGTAACCCATCCTGTGTATTCACTGTGGAAGAGAGCATCACAAAATTTTGCTGCTGCAGCCTGTGGAAACATAACTGTGCTCTTAAATGGATCAATTCATAACGCTTTCAACAGGAAAAGCATGTTTGGAAGCGTGGAGTTGGACAATCTGAACCCCAGGATGGTGTCTCATGTCCATATTAAAGTCGTTCCAAATCTGGAAGGTCCATTTGTAGAATCCTGCTCAAAAGGCTCCATCCTGGATCTCATAAATGTCCTAGAGAGCAGAGGATTCCGCTGGTCCTGCACAGACAGAGACGTAACCCTGATGATTCTCCAGTGCATGAAGAACCCAAGACAGTCCAGCTGCCAAACATGTTCCTCCAGTCTTTTACACAGAAAGAGCCTTTATCTTTAGCGTGACCACGTATTGCGCAGGACAGCCACTACAATGGATTCCTTAAAGGAAAGGAGTCAAAATGAGATATGTTGAGacatgccatagaagaacctcTTTTAGGTGCcaaaaacattgtatttgtgtttgtttgttttatatttgatatgtatgtgtgtagaaCTGTTAAACTCTTTAACATTTCatatttcttacaaaaaaaagcaaagatcCCCAACAGCACTCTGAAACACCCTCTAGTGGCccactcaaatagggctattcactaaACACCAactttacctcttcacaactttacaacagatgtttttaaacacataaagagacaagaaaaatgtaagtatttgaCTCTCGACAAGTTTAGCACAGTTGTTTTAATGGATGCCGACTGAGGAAATGCCAAGATGTTCCAgtctgtcatctaagcaagaggtgcaactttgaagaatctacaatatacaacatatatatCTCTTTTCTTATACAAACAGAAAAATCTCAGTTCAAAACTAGaatctataaaaataatataaatagagatgaacaaataaaaacatgttgcAAGAGTAGGCAAATTCTGTAACCCAACAATAAAAGTCATTGtttctcagaaaaaaacaacatgccCCCTGTTAAGTACTATCCAGATTGGAAGTGTCCAGTGTTTTCACTGAACAGCACTTACAAGTGTCAGAACTtgaaaatcaaaagaaagaataacatttggttttagttttttttagtaatgtgCATTCTACAATTAACCACAGACTCTATTCTATTAAAGACTGTACACAAGT
>XM_022680282.1
aaaattacacaGTTGAAACCCGGAAATTTAttgttgaaaataaaaaagacgcaCACTTTCCTCCTATTCGGAGATGTGGACCTCCCACTTGGAGATAAGCCCCTCCCGTATGGAGCACTGGACCTCCCACTTGGAGGTAAACCCCTCCCCGCTGGAGCATTGGACCGCCCACTTGGAGGTAAACTCCTTCCCGTTGGAACATTGGGCCGCCCACTTTGAAGTAAACCCCTCCCAGTTGGAGCATTGGACCGCCCACTTGGAGGTATAATGTGTATTTCTCAAAGTCTATGTGGTTGGAGGGCAGGAAATAGACAGTATGATTTTGGgACTTGTCATCATTCTGTTCCTCATTGGCCATGGAAACACTGGGCCTGGAACAACCCCTCACCTAAAACACATTGTGATTGGACGATGTTATGACTATATCACTCTGGTGAACCCAAGCTTCAGGTACAACTGTGAAGATATCTGGCGGGAGTTTGAGGAGGCAGTGGTGAGGAGGACACCATGCAGTGTGAGGGTGAAGGACTACCAGAGAATGTTCCGGGCAGTCCCTCAGACTCTTCCCTGTGACAGAcTGCTGTTCTGGAGCAAGACTCGGGACCTGATGCACAGCTATGCAGCCGTCACAGGAAGGTTCTGGACTTTAGAGGACACGCTGGTGGGATTCATTTTTAATGATCTCATCTGGTGTGGGCagcgcgagagagacagagGATTTGATTTTCAGTCCTGTCCAGAGTGGTCAACATGTGTAACCCATCCTGTGTATTCACTGTGGAAGAGAGCATCACAAAATTTTGCTGCTGCAGCCTGTGGAAACATAACTGTGCTCTTAAATGGATCAATTCATAACGCTTTCAACAGGAAAAGCATGTTTGGAAGCGTGGAGTTGGACAATCTGAACCCCAGGATGGTGTCTCATGTCCATATTAAAGTCGTTCCAAATCTGGAAGGTCCATTTGTAGAATCCTGCTCAAAAGGCTCCATCCTGGATCTCATAAATGTCCTAGAGAGCAGAGGATTCCGCTGGTCCTGCACAGACAGAGACGTAACCCTGATGATTCTCCAGTGCATGAAGAACCCAAGACAGTCCAGCTGCCAAACATGTTCCTCCAGTCTTTTACACAGAAAGAGCCTTTATCTTTAGCGTGACCACGTATTGCGCAGGACAGCCACTACAATGGATTCCTTAAAGGAAAGGAGTCAAAATGAGATATGTTGAGacatgccatagaagaacctcTTTTAGGTGCcaaaaacattgtatttgtgtttgtttgttttatatttgatatgtatgtgtgtagaaCTGTTAAACTCTTTAACATTTCatatttcttacaaaaaaaagcaaagatcCCCAACAGCACTCTGAAACACCCTCTAGTGGCccactcaaatagggctattcactaaACACCAactttacctcttcacaactttacaacagatgtttttaaacacataaagagacaagaaaaatgtaagtatttgaCTCTCGACAAGTTTAGCACAGTTGTTTTAATGGATGCCGACTGAGGAAATGCCAAGATGTTCCAgtctgtcatctaagcaagaggtgcaactttgaagaatctacaatatacaacatatatatCTCTTTTCTTATACAAACAGAAAAATCTCAGTTCAAAACTAGaatctataaaaataatataaatagagatgaacaaataaaaacatgttgcAAGAGTAGGCAAATTCTGTAACCCAACAATAAAAGTCATTGtttctcagaaaaaaacaacatgccCCCTGTTAAGTACTATCCAGATTGGAAGTGTCCAGTGTTTTCACTGAACAGCACTTACAAGTGTCAGAACTtgaaaatcaaaagaaagaataacatttggttttagttttttttagtaatgtgCATTCTACAATTAACCACAGACTCTATTCTATTAAAGACTGTACACAAGT

Function

NR:

description
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like

GO: NA

KEGG:

id description
K01242 CD38; ADP-ribosyl cyclase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015608547.2 True 2676 mRNA 0.40 10 10329090 10336901
XM_022680282.1 False 1950 mRNA 0.42 10 10329090 10340189

Neighbor

gene id symbol gene type direction distance location
LOC103028097 tnip3 coding downstream 50757 10267658 ~ 10278333 (-)
mppe1 mppe1 coding downstream 71217 10231513 ~ 10257873 (-)
elovl2 elovl2,LOC101268971 coding downstream 210482 10103179 ~ 10118608 (-)
gcm2 gcm2,LOC107552658,LOC107664656,LOC107707735,LOC107654664 coding downstream 250508 10071078 ~ 10078582 (-)
bloc1s5 bloc1s5 coding downstream 1215185 9109014 ~ 9113905 (-)
LOC103044364 LOC108412379 coding upstream 544664 10884853 ~ 10952099 (-)
aspa aspa,LOC107665049,LOC107712162,LOC107595485,LOC107731059 coding upstream 1007466 11347655 ~ 11370382 (-)
LOC103046022 NA coding upstream 1040813 11381002 ~ 11387605 (-)
LOC103045102 LOC103045102,LOC108427286,LOC106567973,LOC102213336,LOC101488131,LOC106603516 coding upstream 1061327 11401516 ~ 11566079 (-)
akap10 akap10 coding upstream 1227775 11567964 ~ 11588327 (-)
G17799 NA non-coding downstream 30433 10293586 ~ 10298657 (-)
G17796 NA non-coding downstream 58466 10269491 ~ 10270624 (-)
G17791 NA non-coding downstream 68803 10259935 ~ 10260287 (-)
G17782 NA non-coding downstream 195352 10133289 ~ 10133738 (-)
G17780 NA non-coding downstream 231365 10093193 ~ 10097725 (-)
G17808 NA non-coding upstream 2607 10342796 ~ 10343263 (-)
G17845 NA non-coding upstream 200289 10540478 ~ 10543607 (-)
G17859 NA non-coding upstream 514437 10854626 ~ 10855071 (-)
G17921 NA non-coding upstream 710067 11050256 ~ 11060895 (-)
G17929 NA non-coding upstream 806216 11146405 ~ 11147408 (-)
G17792 NA other downstream 81772 10246675 ~ 10247318 (-)
mak mak other downstream 319939 9995145 ~ 10009151 (-)
G17638 NA other downstream 766365 9562427 ~ 9562725 (-)
LOC111188216 NA other downstream 1442773 8861134 ~ 8886317 (-)
LOC103026934 ahrr,LOC108431062 other downstream 2321470 7924929 ~ 8007620 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other upstream 675840 11016029 ~ 11080184 (-)
LOC107197924 NA other upstream 736049 11076238 ~ 11083799 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other upstream 745291 11085480 ~ 11334518 (-)
LOC103044489 LOC103044489,LOC108428292 other upstream 1095247 11435436 ~ 11595523 (-)
G18037 NA other upstream 1344798 11684987 ~ 11685391 (-)

Expression


Co-expression Network