man1a1 (man1a1,LOC107727625)


Basic Information

Item Value
gene id man1a1
gene name man1a1,LOC107727625
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47393247 ~ 47590416 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022662004.1
GGGAgacttttctctttctgttttctcactcttttcacccggagagagagagagcttcagCATGATGAGCTGAAGCGGCGAGCGCGGAGGagagctctctcacacactcacactcacacggAGCGGCTTCATAACttcctaccacacacacacacttctacacacattATTAGAGCAGCAGCACATGCTCCTGGAGGACTCGCTGTGCGGAAGAGAGAGGATTTATCACGTTTGTGGGGAGAATTtctgactctctctttctctttagtaGAAACACAAACATGCCTGTAGCGACTCTCCTGCCTTTCACCGCGACTCCGAGTAGGAAGTCTGTGAGTCCGACCTCGTTCAGACTGACGGAGAAATTCATTCTGCTGCTGGTCTTCAGCGCCTTTATAACGCTCTGCTTCGGCGCGATCTTCTTCTTGCCGGACTCCTCCAAGCTGCTCAGCGGAGTTTTCTTCCGCTCCGCCCCGGCCGAGGGCGACGCGCGCCCGGGCACGGAGGGAGACCTGGCCGGCGGGGTGGGCGCCGGTGCCACCGGCAAGGACGAGAGGATCCTGTACAAAATCAGGAAGGACTACGAGAAGGCGCTGCTGGAAGCCAAAGACACGCTACAGAAGCGGGCCGAGGACATCAAACACGACATTAAAAGCGAGAAGGAGAATGATGTCCAGGGCAGAGCGAGAGGAAGAGACGACTCTCTGCCGGAGATCGAGTTCGCCCGGCCGCCTGGAGCAACAGGGCACGAACCCTCGGACCCGGAGACCAGGGAGAGGAGAGCCAAAGTTAAAGAGATGATGCAGTTTGCTTGGGGCAATTACAAGCGCTATGCCTGGGGTTCCAATGAACTGCGGCCCGTCTCCAAGCAAGGCCACTCCAGCAATCTGTTTGGCAGTCTTAAAGGAGCCACCATCGTGGATGCTCTGGACACTCTCTACATTATGGAGATGTATGATGAGTTTGAGGCTGCTACGGAGTGGGTGGAGaaaaatctggattttaacATGAATGCTGAAATCTCCGTCTTTGAAGTGAACATCCGCTTCGTTGGAGGATTGCTGTCCGCCTATTATCTCTCGGGCAAAGAGGTGTTCAGGAGGAAGGCTATAGAGCTGGGCGAGAAGCTGTTACCTGCATTCAAGACCCCCACTGGAATCCCTTGGGCTCTTCTCAATCTGAAGAGTGGCATAGGCAGGAACTGGCCGTGGGCGTCTGGAGGCAGCAGTATTTTGGCGGAGTACGGCACGCTGCATTTGGAGTTCATGCACCTGAGCAGACTGTCTGGGAAGCCGGTGTTTGCTGAGAAGGTCATGAATATCAGAAAGGTGCTGAATCGTCTGGATAAGCCACAAGGACTGTACCCCAACTATCTGAACCCCAACAGTGGACAATGGGGGCAACATCATGTGTCTGTGGGTGGTCTCGGAGATAGCTTCTACGAGTACCTGCTCAAAGCCTGGCTGATGTCGGACAAGAGAGACGAAGAGGGCAAGAAACTCTACTATGATGCTCTGAAGGCCATTGAGACCAACCTGATCCGGAAGTCCAGTGGTGGTCTAACCTACATCGCTGAGTGGAAAGGAGGGCTTCTGGAACATAAGATGGGTCACCTGACCTGCTTCGCTGGAGGGATGATCGCGCTGGGGGCTGACGGGGCGCCCGACGACAAGACGGGTCACCAGATGGAGCTGGCAGCCGAAATCGCCAGAACATGCCACGAGTCCTACGCCAGAACCAATTTGAAGCTGGGACCTGAGTCCTTCAGGTTTGATGGTGGTGTGGAAGCCATCGCTACGCGGCAGAATGAGAAATACTTCATCCTGAGGCCGGAGGTGATCGAGACCTACATGTACATGTGGAGGTTCACTCACGACCCCAAATACAGGATGTGGGGCTGGGAGGCCGTACAGGCTCTGGAGCAGCACTGTAGATTGGAGGCTGGCTACAGTGGCGTTCGAGATGTTTACGCCAGCAGCCCCAGCCATGATGACGTCCAGCAGAGCTTCTACTTGGCTGAGACTCTGAAgtatCTGTACCTGCTCTTCTCGGATGATGACCACTTGCCGTTTGATCACTGGGTCTTCAACACTGAGGCTCACCCGCTGCCCGTCATAAAGCCTGACAATGCAGACCGGTCTAACCAGCTGTAGTAGCCCTGACCTTTTCCCCAAAGCCTCTGGCTGTGGCGGCCCCTCTCTTTCCTCCTGGGCTGGATTTTAACCCGTGCTGGACACCATCAGCTGAGGCCCATGGCTCAACATCCTCTACGCCATCTTTAGAGATAGCAGTCTGCATGCTGCCCCCACTCTGACCTTTGgtccctcctctttctctcacactctctctcttgatttttttctctcttgatctctctctctttctgagccTCTGAGGCCCAAAGGACCTTCGTCTCTCCTCTGTGAGGAGACCAGATGATTTCCACTCAACCATCTACAGTCTCCCTCATACACACTTTGGggacatatataaaaaaaaaaagccatactGCAGTCAACAGCTATCATGTCTGTTTTTAGGTTGTGcgtgtttgttttaatgttgaatTTTAAGAAATCCACTCACCTTGCAATTCTTTAGTTTAACAGTTGAATCATTTGGAAACTTCATATTTAGGAGCGtcgttttctttccttttctttttctttttctctgagtCACAACTGCAAGGTAGTGAAGTGGAGTTCTAGTGCCTTTTTTAGCTTATTGACTAATAGTTCTGATATTAAAGCAAACAGATGTTTCACTGGTGGTTTAGAACAGCGTCGGCTCAGGCCTCAACTGTACGATTTTTGGAGAGCCGTCTTGTTTTCTTCAGGATCATCTCTTCCCCAGCTCGATTTCCTGGTTCTAACCTTCTGTAAACAGGAGCTGGAGTTGGAGGATCCGAGGAAAGACAAATTTACGTCTTTCTTACTGGAAAATGTCTGGTGTGGACACTATTAATTGAATCTGGTACAACGACATGCCGCTAGTTTACGCTACAGCGAATATCAGTGCTTCTTCCCCACCCAGTCTGCTTTCTTGCGTTCCAATAGCGCAGACAAGCTGTGTACATTTGTTGATTGTTTACTTAAACTGGCCTCTGTAAAACTGAtatgaaaaatgttaatttattgcGTGTGACGTaggaaattcttttttttttcttttcttgcagTTCCAGGGTgtttgcatttcttttttttcttttttttcttctcaattttgtttttatttttaatttttattttgcctaGTTGGCACACTGATGAAGTAACTGTCTTTATCTAAAGATTATCCAGTGGGAACAAGTCAGGAAGACAAGGGCAATTGTCAATCAAATAGCGTTAACTATGTATGAATGTACCACCAAATGTGAAGTGAACATTACGTTGCctagttttgtttttaatcttagtttattttttaatgtttcattctTACTGAAAGCACAAAACTCTGGGGGAAAACGAGCTGCAGCAAGGAACTGGGTGAAACTTGCTAGTACAGAACAGAGAAATGAGCACAAGCAAGAAATGATTATGATGAAAAGATGCAAGGAAAGCAaaagcaaatacacacacacacacatatacacaaggGTATAGTACACTGGATCAAATACACCTGCCCAGTTATACACAGTTTATACACAGCGTATGAAAACAATACTGGGAACAGTCTTATGTTGGCAGAAATGCTGAGGACAGCATGGTGTTGTACAAAAAGAGCTGCTTTCCCAGACCCAGATTTTAAACTTCAATCAagactaaaaatattttcagtggAGACCACTACTGTACCACTGAGTCTTAGGTCCAGGAAAGCAGCTGTACTGCATAGaaatatcatcagatattaagagaTTAGGACCAAACCTAAGAAACCTAGGAATAGATCTCTGAATAGAGATCCTCTAAAGAGGCGATGTGGTCAGTCTGTTTATGGGCATTGCTGCTGTATGGTTTACGTTAAGGCTGGATTTACATGGTGAAAAAAGTcataaagttaatttaattaattaattaatttctttcaGCACATCACAGATAATGCCATAAATTAAATGCAGAGTTTTGTACAACAGTTATGCTTAACCTTGCTGTTGCTAATATGAAACATTCAGTAGAAtcatgttcacattacaagcctcataatttatattttgtttgtatttttttgctcagatcagtgTGCAATCAAATCATTATAACAatactccaaaatctagtagaaatatTTCATGTACAGCAGAAATCGTTATTTCAACACAAGCaggattgttttgttttttaaatagcattgatttcagaaaaaactATGAATttgcaggtgtcccaatacttttgtccatatacagTATAAGCCAAAGGGCCCATGGTTTATACTTTAAGATAACCAAATGACATTCATACCTGTAAAGTAAACTGTATctgcttgtaatgtgaacaaaatcAGTCTCTGAAATGTCATGCATGCACAAACCGGTATAGCTGGTGTTCTAATTTGTTGCCAGATTCTGATCCTCTTAAGCAATATTCTGTTGTTTGTTATGAAAAAAATTACCTAATattatcagttcagttcatcaACAAACACAGCAGGAATTTTAAGCAGAATCTGCTGTGCTGGTACAGCTGCGTGAGCCCCATTACGTCAAAGGGgtcagaattcagcacaacactggtGCTAGCTGATGACAGCACTAAGCTCAAGTGTACAGGCAAACAGATGCGTTAAATGCGATGCaaccattcacattcatgttgcattcCCACAAATCTGATGCATATTCAATTTGagaacacatactgtatgtgaaAGTGACTCGGATTGATTTGtatcagatttaagtcacttggAAATGTGAACGCAGGATGCCGTGTTGATTTAATACAGTCAGTGTAAGCAGTGTCTAATTATATATAAGATTTTTCTTTGTTCATTCTTAAGGGTGGTTTGATATTTACATGCACGAATGCACGGCGAGGGCTAAACAGTGCACATAGGGTCAAGTTCTTGGGTCAAGATTCAGTTTgaatttgaatattttgtttgttaaaaatatttgaaaaaatattacagagctctaattctttaaacattttacacagaCCTGTTTAATTTAGAATCAATAGTAAGTGTTGTCATCtattatgtaaaaatatgcccctcctcctctcccttTTAATCTTTATTCTGATAGAACATACccaaatgagattttttttatattttctgaaatCATCTCATCTATATTATTTACTGGGAAGAAGGTATTTTTAGGCGTgtagtagaaaaaaaatgtttattgaatTGTATCATAACTAATATGTGTAGGCTTGTTTCAAAACACACTTGTCACACTTAAGAAATTTTCACCCATGAGAGCCCAGACAATATTAGTGTCTAATATTGatacaaattttaaaacaataattaagtaGCTAAtggttgtcttttttttatattgtgataaaagaGGACTtaagattaaatattttagggtaAAACACTGATGTAACAAGTGACTTAATAATtagtatttttgcatttttgttttataaatcaGGTTCAAAATGAGTTCTATGGAacgtaaatatttaattaaagcatttaaattgtTAATCTAGTTGGAACAGaactgtaaaagcaaaaaactcACATTTAAAAGTGACTTTAAACCTggagttttatctccagcattaacccagcacacctacattctgtaaatgaggtcacatgatcacacattcacacagactGAGTAAATGCGAAACATCCAGGATGCTCAGTATATGTCAcagtaaggaactttacacagctttaaAGGATCTGTTATAGAAATGAGTCACTGTGGGCTCTTTTGGGTTACGTGTTTTAATAAAGCTAAAACATGAACATATTAACATAAGGCTTATTTTCAGCTATTTTACTTATGTTTGTGTCATTGGTTTGCCAGCTAATTTTAGCATGTTAGCCTCTCTTGTTTACTTGAATGTGTTTCCATGTAAAGCCAGCCTTAAGATCAATACCATGCCCTAAAACGTTCCTACCACATGATTCTGTACTCATGGAGGAGCAGTTTAGAACTGGATCCAAATAGCAGCAGGAATGTAGTAGTTGTATAATCTGAAGAACAAAGGGAAGCTCTCAGCGCAGACCTGCTGTAGGATTGTAGCTAATGATCTTCTAGATATCAGTCCCTCTTCACGCTAATGGCTTCGGTGCTGCTTTCTCAATAATTCCACAACAGCAGGCGCTGCTGGCTCGACAGCTCCGCGAGAGAACATT

Function

symbol description
man1a1 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane and endoplasmic reticulum. Orthologous to human MAN1A1 (mannosidase alpha class 1A member 1).

NR:

description
PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IA

GO: NA

KEGG:

id description
K01230 MAN1A_C, MNS1_2; mannosyl-oligosaccharide alpha-1,2-mannosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022662004.1 True 6297 mRNA 0.43 12 47393247 47590416

Neighbor

gene id symbol gene type direction distance location
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding upstream 193039 47139549 ~ 47200208 (+)
LOC103044458 LOC108424466 coding upstream 274233 47115452 ~ 47119014 (+)
prpf39 prpf39 coding upstream 867421 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 932433 46456013 ~ 46460814 (+)
c3h14orf37 LOC107659812,LOC107574488,LOC107704373,LOC107713862 coding upstream 963198 46420148 ~ 46430049 (+)
LOC103032605 NA coding downstream 327930 47918346 ~ 47926402 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 350021 47940437 ~ 48196539 (+)
mcm9 mcm9,LOC107549683 coding downstream 610520 48200936 ~ 48219344 (+)
cep85l cep85l,LOC107727619,LOC107603087,LOC107678822 coding downstream 641854 48232270 ~ 48311540 (+)
amd1 amd1 coding downstream 951119 48541535 ~ 48565601 (+)
G26827 NA non-coding upstream 42348 47350628 ~ 47350899 (+)
G26770 NA non-coding upstream 286925 47105420 ~ 47106322 (+)
G26766 cx43,LOC107675226,LOC107602186,LOC107716890,LOC107598086 non-coding upstream 298334 47089537 ~ 47094913 (+)
G26762 NA non-coding upstream 380549 47012364 ~ 47012698 (+)
G26725 NA non-coding upstream 623580 46748490 ~ 46769667 (+)
G26857 NA non-coding downstream 76997 47667413 ~ 47670470 (+)
G26860 NA non-coding downstream 81560 47671976 ~ 47672187 (+)
G26861 NA non-coding downstream 88586 47679002 ~ 47681080 (+)
G26862 NA non-coding downstream 90777 47681193 ~ 47681712 (+)
G26864 NA non-coding downstream 91508 47681924 ~ 47682241 (+)
fau fau,LOC108411505,LOC107704371 other upstream 843694 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 3898931 43490323 ~ 43494316 (+)
G25880 NA other upstream 3968341 43424392 ~ 43424906 (+)
G25879 NA other upstream 3971201 43421771 ~ 43422046 (+)
rps29 NA other upstream 4029803 43360469 ~ 43363444 (+)
G26915 NA other downstream 687851 48278267 ~ 48315894 (+)
G26995 NA other downstream 965381 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 988387 48578803 ~ 48618075 (+)
G27075 NA other downstream 1150798 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 1857429 49447845 ~ 49448221 (+)

Expression


Co-expression Network