G60028


Basic Information

Item Value
gene id G60028
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15352047 ~ 15376169 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68340
AGCTACAAGACCCTCCAATTTGTAGTTGGTATCTTCCGGTTCAGACTCTTTGGGTAGAGGGGATGAGGAGGCAGAGTAGCCACACTGGGTCTCCTGGGGCTCAGGGGACTGGGATGTGGTACTTGAGGGGTAAATGTTGAGGGGTTTTAACTGGAGAACTCCAAAGGTGGAGGAAGGCACTGTGGACTGGGACATGGGAGCCTGACCTTCTGCCTCAGAAGGGAATGCAGCATGCTGGGATATGGCTGTGGGTCTCTGCTGGTTCATGGTGGGTTGTGGAGGCTCTGCGGCTACCTGTTGAAATGTCAAAGGGTATCCCGCCAAAGAGGTCCCACCACGGTCATGAATGGCTGCGTCAGCCTGGTAGGACGGCCGTGCCTGGGTTTGAGAGAAAGATGGCTGTGTGGTGACTACACCACCTTCTCCAGATGGGGCACTATGGGACTTGGGGACTTGAGTAAGTGCTGGGTCAAGGTCCAGCATCAGCATGTTGAGGGCCTCAATAGACTGTTCAATTTCTTGTTGAGATGCCATAGGAGGGAACTCCGGAAGGCTGTGGGATTGTAGTACAGGGTTGAAGGTGATCCCATCTGTGACTGGGACCTCGGGAACACCATATTGTTGCCACACATTCAGTCCCCTCTGCACTGCATCCCTACTGCTGGTTGTGCGTGTGGGAGCTTTGGGCATGTACTTCTGCTCTATGGTCGGGGTTGCCCCTAATGATTGAGATCGGTAGATGTTGCCATTCTGGTTGGTGTAGCCACTAGGAGCCCCCAAGTGCTCCTGGACAGATGAGGAGCTGTGAACTCTGGGCTCTGGCATTTTCTCGTGGGCACCCTTCTCCAAGTAGGGCACATCTTGTCCATTAATAACCGTCTCCGACTGGTAGTATAGATCTGCCGGGGTGGCTCTGCCCTCAAATGATGAGAGGGTTCCGAGACTGTCCACACTGTTCCCTTCCTGGCTGTTGGGCAGGTCATCATCAAGTATATCTGTCTCTCGGTCTATGTTGTTGTGTCCGTTGACATGAACCTGGGCAGGGACGAGGTGTAGGACTCCGCCGCCTCCGCTGCCAGAGCTGCTTTGGTAACCTGTCCGATGCATTGGTGCTTCCAAACCACTGAGCAACTGGTCCAGCTCCTGTTTTTCCTCTGGGCTAAGGGGCTGGGAGGATGGCTGACTCACCAAGGCCGGCTGATGGCTGGCTTCATCAGTGCGGTCAGTCTTGATGGAAGCAGTGGAGTTGCCCGAGTCACTGCTTACAGACAAGGCGTGGTCGACTGGTGGTAGAGTGTGGTCTACTGCAGGTAAAGCATGATCGACAGCAGCTGGGAGACCATTAGTTGTGACCCCTCCTTCCAGAGACTCTTTCTTCCGAACCTTAGCGTAGAGACTACCATCCAATGGACCTTGTGTGTGAATAACGTCTTCCATGGAATCTTCACAGCGCTGGTTGAAGTTCTCATAAGAATCCCAGCGAATCAGAGGATCTTGGGTATTGTAGTCCACAGAAACAGTGGGCCCGTTCTCAAGGTGGTCCATTCCTTGGATTTTTTCTGGACCAAAAGAAAAGACAAATTCCACTTTTCCATATTCAGGAAATCTGTCATCT
>TU68341
AGCTACAAGACCCTCCAATTTGTAGTTGGTATCTTCCGGTTCAGACTCTTTGGGTAGAGGGGATGAGGAGGCAGAGTAGCCACACTGGGTCTCCTGGGGCTCAGGGGACTGGGATGTGGTACTTGAGGGGTAAATGTTGAGGGGTTTTAACTGGAGAACTCCAAAGGTGGAGGAAGGCACTGTGGACTGGGACATGGGAGCCTGACCTTCTGCCTCAGAAGGGAATGCAGCATGCTGGGATATGGCTGTGGGTCTCTGCTGGTTCATGGTGGGTTGTGGAGGCTCTGCGGCTACCTGTTGAAATGTCAAAGGGTATCCCGCCAAAGAGGTCCCACCACGGTCATGAATGGCTGCGTCAGCCTGGTAGGACGGCCGTGCCTGGGTTTGAGAGAAAGATGGCTGTGTGGTGACTACACCACCTTCTCCAGATGGGGCACTATGGGACTTGGGGACTTGAGTAAGTGCTGGGTCAAGGTCCAGCATCAGCATGTTGAGGGCCTCAATAGACTGTTCAATTTCTTGTTGAGATGCCATAGGAGGGAACTCCGGAAGGCTGTGGGATTGTAGTACAGGGTTGAAGGTGATCCCATCTGTGACTGGGACCTCGGGAACACCATATTGTTGCCACACATTCAGTCCCCTCTGCACTGCATCCCTACTGCTGGTTGTGCGTGTGGGAGCTTTGGGCATGTACTTCTGCTCTATGGTCGGGGTTGCCCCTAATGATTGAGATCGGTAGATGTTGCCATTCTGGTTGGTGTAGCCACTAGGAGCCCCCAAGTGCTCCTGGACAGATGAGGAGCTGTGAACTCTGGGCTCTGGCATTTTCTCGTGGGCACCCTTCTCCAAGTAGGGCACATCTTGTCCATTAATAACCGTCTCCGACTGGTAGTATAGATCTGCCGGGGTGGCTCTGCCCTCAAATGATGAGAGGGTTCCGAGACTGTCCACACTGTTCCCTTCCTGGCTGTTGGGCAGGTCATCATCAAGTATATCTGTCTCTCGGTCTATGTTGTTGTGTCCGTTGACATGAACCTGGGCAGGGACGAGGTGTAGGACTCCGCCGCCTCCGCTGCCAGAGCTGCTTTGGTAACCTGTCCGATGCATTGGTGCTTCCAAACCACTGAGCAACTGGTCCAGCTCCTGTTTTTCCTCTGGGCTAAGGGGCTGGGAGGATGGCTGACTCACCAAGGCCGGCTGATGGCTGGCTTCATCAGTGCGGTCAGTCTTGATGGAAGCAGTGGAGTTGCCCGAGTCACTGCTTACAGACAAGGCGTGGTCGACTGGTGGTAGAGTGTGGTCTACTGCAGGTAAAGCATGATCGACAGCAGCTGGGAGACCATTAGTTGTGACCCCTCCTTCCAGAGACTCTTTCTTCCGAACCTTAGCGTAGAGACTACCATCCAATGGACCTTGTGTGTGAATAACGTCTTAGTGCACAGCTCTGTAAGTGTCCGAGAAGAAAGTTTTGAAAAGTCTCTGTGTTTTCTTGCTCTCGAGCCCCAGCAGCTCAACATTAGCGAGCTGTGGGAGTAGTTTTGGATCAGAAAGCTCTCTCCTCTTTCTCCACCTCCTGTTCTAACTCCGATTGAGCTGTGCTGCTAAAGATGACATGACTTTTTCCTTCTCGTAGGATGTACTACACCCCTAGTGAGGTGGGCGTGAATTTATCCTCGGCCAGCTGTGTGTCTGGTGTCTACTAAAGTGACATCACTGGGGCTTTCTTTGTCGGATTGGCTTGCTTCCTTCACTAACTCCCTGGCTCTGTTCCAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68340 False 1615 TUCP 0.53 3 15352047 15376169
TU68341 True 1776 TUCP 0.53 2 15352047 15357846

Neighbor

gene id symbol gene type direction distance location
CI01000009_14976078_14977321 NA coding upstream 374623 14975771 ~ 14977424 (+)
CI01000009_14925314_14952223 NA coding upstream 399476 14924621 ~ 14952571 (+)
CI01000009_14916323_14920716 NA coding upstream 431252 14916265 ~ 14920795 (+)
CI01000009_14862429_14898325 SLC4A3 coding upstream 453498 14861732 ~ 14898549 (+)
CI01000009_14857765_14859526 NA coding upstream 492411 14857713 ~ 14859636 (+)
CI01000009_15415868_15427139 NA coding downstream 37005 15413174 ~ 15427198 (+)
CI01000009_15610515_15613753 NA coding downstream 233863 15610032 ~ 15613753 (+)
CI01000009_15625341_15626360 GPBAR1 coding downstream 248990 15625159 ~ 15626403 (+)
CI01000009_15637754_15643935 NA coding downstream 261481 15637650 ~ 15643935 (+)
CI01000009_15667251_15668333 NA coding downstream 291082 15667251 ~ 15669450 (+)
G60071 NA non-coding upstream 42148 15309616 ~ 15309899 (+)
G60067 NA non-coding upstream 50653 15301107 ~ 15301394 (+)
G60033 NA non-coding upstream 136534 15215310 ~ 15215513 (+)
G60021 NA non-coding upstream 142690 15209151 ~ 15209357 (+)
G59985 NA non-coding upstream 175177 15176156 ~ 15176870 (+)
G60187 NA non-coding downstream 131671 15507840 ~ 15509141 (+)
G60200 NA non-coding downstream 151855 15528024 ~ 15529588 (+)
G60209 NA non-coding downstream 164443 15540612 ~ 15542007 (+)
G60218 NA non-coding downstream 177458 15553627 ~ 15553835 (+)
G60219 NA non-coding downstream 178185 15554354 ~ 15554696 (+)
G58711 NA other upstream 578274 14766659 ~ 14773773 (+)
G58649 NA other upstream 700025 14649724 ~ 14652022 (+)
G58558 NA other upstream 850533 14496936 ~ 14501514 (+)
CI01000009_15708273_15712002 METTL5 other downstream 331823 15706460 ~ 15712005 (+)
CI01000009_15770057_15782295 FASTKD1 other downstream 382010 15770057 ~ 15783049 (+)

Expression


Co-expression Network