LOC103022915


Basic Information

Item Value
gene id LOC103022915
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64412269 ~ 64418443 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664462.1
aaactacATATTATACAGGGCTCTAAACCTTTACAAACCCAGGCAATGCCCTCAGTGGGCCCCATAAAGGTAGCCTATATTAGTTTCTCTTTGTTAAAGGGCAcaatacaaagtatttcagcatgaaagcacgtatttgtaatgtgtgacatcTAGAGTCTTGTTGCTATTTGTGTGTCTTTTATGAATTCTATAACTGCTTTGACTGTAGGctcaatactttttttaaagtaacagtTTTTTGTTACCTTCTCAAGACGTTCTCTCGCTTTAGAGTGGCAGTCTAGGCCATGTCTATGTTTCAGACCAACAGTAAGAGACATCAGCTGCTCAGCTCGCCAGCCAATCAGCGCCTCTGTGGCGTGACGTCATCATAGTTCGGGGAGCGGTTCAAACGGACACGTCACAGCAGGTGAAGAAGCTGAGTGTTCTGAGCGCCGCGTCAGAGTGAAGTGTTCTACTGAAGGAGAAGCACTGAGGAATGTGAGAACAGCACTTAAATAGAAATGGATATGAAACAGCAAAGCGAGCATGAGTGCTCCCCCAGTCCCACAAGCTGTGGGTGCTGCAACTTTCACTTTCTCAGGTGGGCCCTCTTTCATAGGAGGATTGGCGTCCAGGACAGTCAGAGCGAGGACGACAAAACAAAGAGGCCCACAAAGATGAGTGTACGGAGACTTATTAAAAGACTCCAAAAAACAGGGCAGACTCCAGTAGTCGAGGTCAGGAAAGATGTGAGAGGTGTGAGCTCTGAGTTGGAGAGCCTGCAGGAGTCTACTGAATGCAGCTCCTCGTCTCAGCCTGGTCCGGAGGTGCAGGAGAAGAAGACAGTACCATTAGTGCCACTCGGAGAGCCGGTGGGGGTGCTGTCAGTGACCATCAAGAGCTGCAAAGATTTGACTACATTTACTTATGTAAAGTCAGGAACACTGGGAGCTGTGAGGGTCACTTTTGGAAAACTGCAGAGAAGCACAAAACTGCAGCTCTACAAGGACCCCATGATCTTCAATGAAAAGATGCACATCTCCGTTCAGATCAGCAAGGAAGATGTTTTTGGGGACAACGACTCCAGTGTTCTGATGGTGGATTTGCTTTGTGTTGATGCTCATACACGCGTCTTCAGAATCATGGGCAACGACACCATTAGTCTAATGGAAATTTTAAATaATCCATCACCAATTTACTTGTTTGATCTGAGGCTCCAAGATCAAaAAGTTGGCACGGTGGACGCAGAGTTGGGGTTCACTTACGGCTTTATGGGCTATGGATATTCTCACCAGATAACACACAgtgaaaaaactgtaaaaagtctGGTGCAGAAATCCTGCTTTCTCCACTGCCCTCCTCCTGAGGATCAAAGTGATACACACGAtaATGATGTGAGCCCTTCTACACTGCCCCCAGTGGACCTCGACTCACTGATACAGTCAGACTCAGTGAGTAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCTATAAGGAGGAGAGCCAGGCTTTCACGTCTACAAACTAAATGGAAGACGTTGGAGAGCAGTGAGGACAGGCTGACATTTCTGGAGAATTTGATCATGAAGAAGGGCCCATCTAAGTAGGAGGAAGGGAGGAGGAGATAGAAAGCCAAGGAGGATAAAGAAACATCCTGGCCATGTTCGCACCATCTAACCGCCCCACCAAACACTGGTGAAGTCACTGTGCGGAAGTGATCGGAGTGTTGGATGCAGAACTGGCGGCCCCTTATGGATTCCTGGGCTATGGATTCTCACCTGATAAAACATGCAGGAAGAACTATGACGAATCTGGTGCAGAAATCCTGCTTCCTCCGCTGCCCTCCTCTTGTGGATCAAAGTGATACACACGGtgAAGATGTGAGCCTAAAGTTGTGAGATGTGAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCCATAAGGAGGAGAACCAGATAAAACACACAGGAACAACTATGAAGAATCTGATTGACAAATAAATCCAAACCACTGAGACATACCCACATTCAGCTCCacaataattagaataattcaTCTCTCCATGTTTGATCTATAATTTCAAATTTATcgctgtttctgtctctctgtttctgcttGAGTGGGTGAGACAGCGAGGAGCAGTGAGTGCAGGACATCCGCTGGGCTGTTAGACTGCATAGAGAAGAGATCAGCTTGGCTGAACTTGGTGTAGGCCGGGGTGAACATAGGTTGTTGCGGCAACTGAGGAACCATTGGAGGACTGcaagacaaaatataaaaaagagaacAGGAAAGATGGAAAAACAggaaagagtgaaaaaagaaCAGCATTCAAGATGAAGATGTAACCAACCCAGCCTGGTTGCCATCACTACCATCACAACCTGTCTCCACTAAAtagagattttatttaaataaaaccaaagcaaca
>XM_022664465.1
aaactacATATTATACAGGGCTCTAAACCTTTACAAACCCAGGCAATGCCCTCAGTGGGCCCCATAAAGGTAGCCTATATTAGTTTCTCTTTGTTAAAGGGCAcaatacaaagtatttcagcatgaaagcacgtatttgtaatgtgtgacatcTAGAGTCTTGTTGCTATTTGTGTGTCTTTTATGAATTCTATAACTGCTTTGACTGTAGGctcaatactttttttaaagtaacagtTTTTTGTTACCTTCTCAAGACGTTCTCTCGCTTTAGAGTGGCAGTCTAGGCCATGTCTATGTTTCAGACCAACAGTAAGAGACATCAGCTGCTCAGCTCGCCAGCCAATCAGCGCCTCTGTGGCGTGACGTCATCATAGTTCGGGGAGCGGTTCAAACGGACACGTCACAGCAGGTGAAGAAGCTGAGTGTTCTGAGCGCCGCGTCAGAGTGAAGTGTTCTACTGAAGGAGAAGCACTGAGGAATGTGAGAACAGCACTTAAATAGAAATGGATATGAAACAGCAAAGCGAGCATGAGTGCTCCCCCAGTCCCACAAGCTGTGGGTGCTGCAACTTTCACTTTCTCAGGTGGGCCCTCTTTCATAGGAGGATTGGCGTCCAGGACAGTCAGAGCGAGGACGACAAAACAAAGAGGCCCACAAAGATGAGTGTACGGAGACTTATTAAAAGACTCCAAAAAACAGGGCAGACTCCAGTAGTCGAGGTCAGGAAAGATGTGAGAGGTGTGAGCTCTGAGTTGGAGAGCCTGCAGGAGTCTACTGAATGCAGCTCCTCGTCTCAGCCTGGTCCGGAGGTGCAGGAGAAGAAGACAGTACCATTAGTGCCACTCGGAGAGCCGGTGGGGGTGCTGTCAGTGACCATCAAGAGCTGCAAAGATTTGACTACATTTACTTATGTAAAGTCAGGAACACTGGGAGCTGTGAGGGTCACTTTTGGAAAACTGCAGAGAAGCACAAAACTGCAGCTCTACAAGGACCCCATGATCTTCAATGAAAAGATGCACATCTCCGTTCAGATCAGCAAGGAAGATGTTTTTGGGGACAACGACTCCAGTGTTCTGATGGTGGATTTGCTTTGTGTTGATGCTCATACACGCGTCTTCAGAATCATGGGCAACGACACCATTAGTCTAATGGAAATTTTAAATaATCCATCACCAATTTACTTGTTTGATCTGAGGCTCCAAGATCAAaAAGTTGGCACGGTGGACGCAGAGTTGGGGTTCACTTACGGCTTTATGGGCTATGGATATTCTCACCAGATAACACACAgtgaaaaaactgtaaaaagtctGGTGCAGAAATCCTGCTTTCTCCACTGCCCTCCTCCTGAGGATCAAAGTGATACACACGAtaATGATGTGAGCCCTTCTACACTGCCCCCAGTGGACCTCGACTCACTGATACAGTCAGACTCAGTGAGTAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCTATAAGGAGGAGAGCCAGGCTTTCACGTCTACAAACTAAATGGAAGACGTTGGAGAGCAGTGAGGACAGGCTGACATTTCTGGAGAATTTGATCATGAAGAAGGGCCCATCTAAGTAGGAGGAAGGGAGGAGGAGATAGAAAGCCAAGGAGGATAAAGAAACATCCTGGCCATGTTCGCACCATCTAACCGCCCCACCAAACACTGGTGAAGTCACTGTGCGGAAGTGATCGGAGTGTTGGATGCAGAACTGGCGGCCCCTTATGGATTCCTGGGCTATGGATTCTCACCTGATAAAACATGCAGGAAGAACTATGACGAATCTGGTGCAGAAATCCTGCTTCCTCCGCTGCCCTCCTCTTGTGGATCAAAGTGATACACACGGtgAAGATGTGAGCCTAAAGTTGTGAGATGTGAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCCATAAGGAGGAGAACCAGTGGGTGAGACAGCGAGGAGCAGTGAGTGCAGGACATCCGCTGGGCTGTTAGACTGCATAGAGAAGAGATCAGCTTGGCTGAACTTGGTGTAGGCCGGGGTGAACATAGGTTGTTGCGGCAACTGAGGAACCATTGGAGGACTGcaagacaaaatataaaaaagagaacAGGAAAGATGGAAAAACAggaaagagtgaaaaaagaaCAGCATTCAAGATGAAGATGTAACCAACCCAGCCTGGTTGCCATCACTACCATCACAACCTGTCTCCACTAAAtagagattttatttaaataaaaccaaagcaaca
>XM_022664467.1
ctacATATTATACAGGGCTCTAAACCTTTACAAACCCAGGCAATGCCCTCAGTGGGCCCCATAAAGGTAGCCTATATTAGTTTCTCTTTGTTAAAGGGCAcaatacaaagtatttcagcatgaaagcacgtatttgtaatgtgtgacatcTAGAGTCTTGTTGCTATTTGTGTGTCTTTTATGAATTCTATAACTGCTTTGACTGTAGGctcaatactttttttaaagtaacagtTTTTTGTTACCTTCTCAAGACGTTCTCTCGCTTTAGAGTGGCAGTCTAGGCCATGTCTATGTTTCAGACCAACAGTAAGAGACATCAGCTGCTCAGCTCGCCAGCCAATCAGCGCCTCTGTGGCGTGACGTCATCATAGTTCGGGGAGCGGTTCAAACGGACACGTCACAGCAGGTGAAGAAGCTGAGTGTTCTGAGCGCCGCGTCAGAGTGAAGTGTTCTACTGAAGGAGAAGCACTGAGGAATGTGAGAACAGCACTTAAATAGAAATGGATATGAAACAGCAAAGCGAGCATGAGTGCTCCCCCAGTCCCACAAGCTGTGGGTGCTGCAACTTTCACTTTCTCAGGTGGGCCCTCTTTCATAGGAGGATTGGCGTCCAGGACAGTCAGAGCGAGGACGACAAAACAAAGAGGCCCACAAAGATGTCTACTGAATGCAGCTCCTCGTCTCAGCCTGGTCCGGAGGTGCAGGAGAAGAAGACAGTACCATTAGTGCCACTCGGAGAGCCGGTGGGGGTGCTGTCAGTGACCATCAAGAGCTGCAAAGATTTGACTACATTTACTTATGTAAAGTCAGGAACACTGGGAGCTGTGAGGGTCACTTTTGGAAAACTGCAGAGAAGCACAAAACTGCAGCTCTACAAGGACCCCATGATCTTCAATGAAAAGATGCACATCTCCGTTCAGATCAGCAAGGAAGATGTTTTTGGGGACAACGACTCCAGTGTTCTGATGGTGGATTTGCTTTGTGTTGATGCTCATACACGCGTCTTCAGAATCATGGGCAACGACACCATTAGTCTAATGGAAATTTTAAATaATCCATCACCAATTTACTTGTTTGATCTGAGGCTCCAAGATCAAaAAGTTGGCACGGTGGACGCAGAGTTGGGGTTCACTTACGGCTTTATGGGCTATGGATATTCTCACCAGATAACACACAgtgaaaaaactgtaaaaagtctGGTGCAGAAATCCTGCTTTCTCCACTGCCCTCCTCCTGAGGATCAAAGTGATACACACGAtaATGATGTGAGCCCTTCTACACTGCCCCCAGTGGACCTCGACTCACTGATACAGTCAGACTCAGTGAGTAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCTATAAGGAGGAGAGCCAGGCTTTCACGTCTACAAACTAAATGGAAGACGTTGGAGAGCAGTGAGGACAGGCTGACATTTCTGGAGAATTTGATCATGAAGAAGGGCCCATCTAAGTAGGAGGAAGGGAGGAGGAGATAGAAAGCCAAGGAGGATAAAGAAACATCCTGGCCATGTTCGCACCATCTAACCGCCCCACCAAACACTGGTGAAGTCACTGTGCGGAAGTGATCGGAGTGTTGGATGCAGAACTGGCGGCCCCTTATGGATTCCTGGGCTATGGATTCTCACCTGATAAAACATGCAGGAAGAACTATGACGAATCTGGTGCAGAAATCCTGCTTCCTCCGCTGCCCTCCTCTTGTGGATCAAAGTGATACACACGGtgAAGATGTGAGCCTAAAGTTGTGAGATGTGAGTTCTGAACCTGCAGGCCTAGTGGAACAAGCCATAAGGAGGAGAACCAGATAAAACACACAGGAACAACTATGAAGAATCTGATTGACAAATAAATCCAAACCACTGAGACATACCCACATTCAGCTCCacaataattagaataattcaTCTCTCCATGTTTGATCTATAATTTCAAATTTATcgctgtttctgtctctctgtttctgcttGAGTGGGTGAGACAGCGAGGAGCAGTGAGTGCAGGACATCCGCTGGGCTGTTAGACTGCATAGAGAAGAGATCAGCTTGGCTGAACTTGGTGTAGGCCGGGGTGAACATAGGTTGTTGCGGCAACTGAGGAACCATTGGAGGACTGcaagacaaaatataaaaaagagaacAGGAAAGATGGAAAAACAggaaagagtgaaaaaagaaCAGCATTCAAGATGAAGATGTAACCAACCCAGCCTGGTTGCCATCACTACCATCACAACCTGTCTCCACTAAAtagagattttatttaaataaaaccaaagcaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664462.1 True 2415 mRNA 0.46 17 64412269 64418443
XM_022664465.1 False 2250 mRNA 0.47 17 64412269 64418443
XM_022664467.1 False 2304 mRNA 0.46 16 64412272 64418443

Neighbor

gene id symbol gene type direction distance location
tmem165 tmem165,LOC107665411,LOC107755243,LOC107601909,LOC107573988,LOC107683960 coding upstream 568 64399672 ~ 64411701 (+)
srd5a3 NA coding upstream 14640 64394209 ~ 64397629 (+)
pdgfra pdgfra coding upstream 267945 64111719 ~ 64144324 (+)
LOC103022002 LOC103022002 coding upstream 307937 64102281 ~ 64104332 (+)
gsx2 gsx2 coding upstream 314609 64095650 ~ 64097660 (+)
exoc1 exoc1,LOC107683916,LOC107555758 coding downstream 153927 64572370 ~ 64589618 (+)
chst14 chst14,LOC107665414 coding downstream 173214 64591657 ~ 64602638 (+)
kiaa1211 kiaa1211 coding downstream 210730 64629173 ~ 64673511 (+)
LOC103038194 NA coding downstream 276519 64694962 ~ 64702540 (+)
LOC103037884 paics,LOC108415209,LOC107555752,LOC107556158,LOC108257759,LOC107721365,LOC107683924,LOC107665310,LOC107737306 coding downstream 293730 64712173 ~ 64728301 (+)
G30517 NA non-coding upstream 105845 64306115 ~ 64306424 (+)
G30393 NA non-coding upstream 862069 63527521 ~ 63550200 (+)
LOC103041812 NA non-coding upstream 943518 63466243 ~ 63468751 (+)
G30383 NA non-coding upstream 976287 63433831 ~ 63435982 (+)
LOC111191941 NA non-coding upstream 1113537 63297863 ~ 63298732 (+)
G30539 NA non-coding downstream 4058 64422501 ~ 64422895 (+)
G30540 NA non-coding downstream 5066 64423509 ~ 64425402 (+)
G30543 NA non-coding downstream 36331 64454774 ~ 64456432 (+)
G30587 NA non-coding downstream 111487 64529930 ~ 64530163 (+)
G30588 LOC107659282 non-coding downstream 123672 64542115 ~ 64543421 (+)
kit kit other upstream 142574 64231244 ~ 64269695 (+)
G30362 NA other upstream 1066576 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1481136 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 1558981 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2476186 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 603976 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 659337 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 680059 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 680848 65099291 ~ 65099362 (+)
G31000 NA other downstream 1410338 65828781 ~ 65837365 (+)

Expression


Co-expression Network