LOC103041822


Basic Information

Item Value
gene id LOC103041822
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64803224 ~ 64810333 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664623.1
acacacacaggcacagcaCACAGTCCCACCAGCAGGATCTTCACAAACTCCAACCATGCTCTTGCAAAACTTACTGGAATACTTTGATTTGACCTCCTGGTTGatatgcatttttctttttcttctgtttactgatattattagGAATATAAATCCACCAAATTTCCCACCAGGTCCCTGGCGTCCACCTTTCGTGGGAAACGTCTTCACTGGAGTTGACTACAAAACCATAGACAAGCTTTACAAGCAGTATGGGGATGTGTTCAGTGTGAGATGGGGCAGTAGCAAAACTGTGTACATCTGTGGATACAAAATGTTGAAGGAGGCTCTCGTCACTCAGTTGGACAGCTTTATTGAGCGCCCAGTTATTCCTCTGTTTGACAAAATCTATAAGGGGCGTGGTGTGTCTCTCAGTAATGGGTACATGTGGAAGATGCAGAGAAAGTTTATCATCACTCACCTGCGATACTTTGGTGAGGCAAAGAAGACCCTTGAGCTGAGCATCCAACAGGAGAGCGTCTGCCTGTGTGAAGCCTTTAAAGAGGAAAAGCGTCCCTTTGATCCCCAGTTTTACCTCAACACTGCTGTTTCAAACATCATCTCAGTTCTAATATTTGGGCATCGCTTTGACTACCATGACGAAAGCTATCTTAAAATTCAGCGTACACTTGTTGAAGCTGTCTCACTGGCAGGCTCTTCTCATGCTAATCTCTACAATATCTTCCCTTTCCTTTTTAATTACATTCGTGGGCCACATCAGAAAGTGTTTGCAAACTATTTTGCGATACTTGATTTTGTGAAAGAAGAGGTCAGAAAGCACAAGGAGAATTGGGATCCATCAGACCCACGGGATTACATTGATGCTTATCTGGCGGAGATGGAGAAGAGAAAGAGTGACCCTGAAGCTGGTTTTGACCTGGATACATTAGCTTGTGCCACAATGGACATGTTTGAGGCTGGAACAGAAACCTTGGCCACTACAATGCGCTGGGCTCTGCTTTTCCTGATGAAATTTCCTGAGATACAGAAAAAGGTGCAGGCAGAGATTGACAGTGTGATTGGACAGTCACGCCAACCCACCTTGGCAGACAGGCCCAACATGCCATACACTGAAGCTGTCATCCACGAGACGCAGAGGATGGGCAACATTCTTCCCTTGGGTTTTCCCAAAAGAGCCTGTAAGGACATAACACTGGGGGGATACTTCATACCAAAGGGCACAGCTATGACTACAAACCTGTCATCTGTGCTTACTGACAAAAATGAGTGGGAAACACCAGACATCTTCAACCCTGGACACTTCCTTGATGAGCAAGGTCAATTCCGCAAGAGAGACGCCTTCATGCCTTTTTCAGCAGGTAAGAGAGTGTGTCTAGGTGAGCCTCTGGCACGCATGGAGCTCTTCTTATTTATCACCTCTCTGCTGCAACGCTTCACTTTCTCTCCCGGCTCAGGAGAGGAGCTGAACCTGGAGGGTCAGCTGGGCTTCACGTACACCCCCAGGCCTTACCGCATGTGTGTGATTCCACGCTAAGGAACAGAGAAATAAGATAATACTCTAATACATGAGAATGTGGTACAgaatattaacaataaatatgtttaaacatAGTTGAGCTGCTTAAAATCTAGCATTATGATATTTaattcaaatgtaaaaaatatttaaactcaTAATGCAAgatgtcactgtccaatgaaaaacacgtatccatttttgtcaatttttagtttactgcataatttgaagACACAGATTATGTTACACTGTGTATAACACTGTGTTACAACAGTAGAAATTTGCTAAAGGACCTGAAATCAACTATTTTTACAATGACTTCCATTAAAGGTTAAAAAGGTGttatttctctcctgtaaagttgctgatgatacatgtttttcattgggaGTGACAAAGGAGGTTCTAATCAAGGAACACATGCGCAGTGAAGCACTTGTGAGCATtataaacattgcaacatgacgatTTGGGTTTTCAgaatgtacaatttttttttatgaatgcaTGTTCATGCAaatttttaagtattaatttttaatgaCTAGGCAAGCAACATGAGAATAAAGGCTGCAGTATGTTCATATAGTTTACTCTGCATACAAATa

Function

GO:

id name namespace
GO:0016829 lyase activity molecular_function

KEGG:

id description
ko04146 Peroxisome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664623.1 True 2127 mRNA 0.42 9 64803224 64810333

Neighbor

gene id symbol gene type direction distance location
LOC103042125 NA coding upstream 53515 64742654 ~ 64749709 (+)
LOC103042444 NA coding upstream 60984 64731659 ~ 64742240 (+)
LOC103037884 paics,LOC108415209,LOC107555752,LOC107556158,LOC108257759,LOC107721365,LOC107683924,LOC107665310,LOC107737306 coding upstream 74923 64712173 ~ 64728301 (+)
LOC103038194 NA coding upstream 100684 64694962 ~ 64702540 (+)
kiaa1211 kiaa1211 coding upstream 129713 64629173 ~ 64673511 (+)
LOC111190912 NA coding downstream 16362 64826695 ~ 64834077 (+)
LOC103041527 LOC103041527 coding downstream 38315 64848648 ~ 64856825 (+)
LOC103036008 LOC103036008,LOC108415307 coding downstream 48997 64859330 ~ 64868413 (+)
LOC103035382 LOC108415267 coding downstream 59518 64869851 ~ 64876715 (+)
LOC103035066 NA coding downstream 70605 64880938 ~ 64890653 (+)
G30664 NA non-coding upstream 11425 64789121 ~ 64791799 (+)
G30652 NA non-coding upstream 28246 64752233 ~ 64774978 (+)
G30653 NA non-coding upstream 47373 64753526 ~ 64755851 (+)
G30640 ppat,LOC106560282,LOC107683925 non-coding upstream 84186 64709323 ~ 64719038 (+)
G30617 cep135 non-coding upstream 180886 64615427 ~ 64622338 (+)
G30643 NA non-coding downstream 1046 64811379 ~ 64824149 (+)
G30683 NA non-coding downstream 82065 64892398 ~ 64909454 (+)
LOC111190945 NA non-coding downstream 153979 64964312 ~ 64982401 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding downstream 174145 64984478 ~ 64987306 (+)
G30718 NA non-coding downstream 240491 65050824 ~ 65159264 (+)
kit kit other upstream 533529 64231244 ~ 64269695 (+)
G30362 NA other upstream 1457531 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1872091 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 1949936 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2867141 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 212086 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 267447 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 288169 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 288958 65099291 ~ 65099362 (+)
G31000 NA other downstream 1018448 65828781 ~ 65837365 (+)

Expression


Co-expression Network