LOC103035382 (LOC108415267)


Basic Information

Item Value
gene id LOC103035382
gene name LOC108415267
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 64869851 ~ 64876715 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664648.1
CTGTTTTACCCCCCTTATATTTGGTCttatctcttctttctctctcgccaCAGGAACTACTGCCGATGCACgacacacacaaatgcaaacATACAGAGCCTTTACTTACACATACGCACAAAACCTAAGGATTAAAGAAGAGTTAAATTGCAGTTGATAAACTCTATAGTTGAAACTGGCCTAGGCTGCTGCTTTCTAAATCATTTACTCTGAAGAGGTGTTGGCTATGATTTTGCATGCCTTATTTGAGCTGTTTGGTGTTAAAGGCTGGTTAATAATCATTTCAGTTTTCTTGATCCTGATCGATTATATTCAGAACAAAAATCCACCTAACTTTCCTCCAGGACCACGGCCTTTACCTTTCTTGGGAAATGTCTTCACTGGAGTTGACTATAAAACTATGGACAAGCTTGCTGAGAAATTTGGGAATATTTTCAGTCTGCGGAGAGGAAGTACTAAAATAGTGTACGTTTCTGGATATAAGGCGGTGAAGGAAGCTCTTGTCACAAAAGTGGAAAGCTTTGCCCGTTTTGTTACACCTCTGTTTAATGAAATATACAAAGGAAGAGGTGTGTCATTCAGCAATGGCTACTCATGGAGGAAACAGCAGCAGTTTGCTGTTAGCCACCTGAAGAACTTTGATGAAGGGAAAAggactctggaaaaaaacatccAGCGAGAGAGCCATTTCCTCTCTGAGGCATTTAAAGAGGAACAGGGCTGTCCATTTGATCCTCTGCTCAAAATTAATAACGCAGTGGCCAATGTGATCGGCACCCTGGTCTTCGGCCATCGTCATGAGTACGATGACATTCAGTTCCAGAAACTTCTACGGATGAGTGCAGAGTCGGTGTACCTCACTGGCTCTGTGTGGAATGAGTTGTACGATGCATTCCCCAGCATAATGAGGAGAATACCAGGACCACATCACACTATAATCAACAACTACAAAACACTTGCAGCCTTTCTGAAAGAagagattaacaaacacaaactcGACTGGAATCCTGATGAGCCTCGGGATTACATCGATTCCTACTTAGCAGAAATTGAGAAGagaaagacagacaaagaggCCCAGTTTGATGTGGACAATCTGGCACTGTGCATGGTGGACCTGTTCGAGGGAGGAACTGAGACCACAACCAACTCTTTACGCTGGGCTCTTCTCTACATGATTAAATATCCACTAATTCAGGAGAAGGTCCAGGAGGAGATTGACCGTGTTGTTGGACGTTCACGTTTACCCACTCTGGCAGACAAGGCCAACATGCCGTACACCAATGCTGTCCTTCATGAGGTGCAAAGGAAAGGCAATCTTGTTCCACTAAATATGTCCAGGGTGACCATAAAGAACTCTACACTGGGAGGCTACTTTATACCAAAGGGAACAATAATGATCACTAACCTCTCCTCCGTGCTGTGTGATAAGAGTGAATGGGAAACACCAGATATCTTCAACCCTGGACACTTTCTGGACTCGGAGGGCCGCTTCCACAGACAAGatgctttctttgcattctcTGCAGgtAAGAGGATGTGTCCTGGAGAGTATCTGGCTCGTGTGGAGCTATTCCTCCTCTTCACCATCCTCCTTCAGACCTTCACTTTTAGTCCTCCTCATGGTGAAGAGCCCAGTCTGGAAAGTCAGCTCGGCTTTACACAGGCCCCAAAGGCATACAAGTTGTGTGCTATCCCAAGATAAAATCAtgtatagtGTACAGTACTTATTTAATTGAGACTTTCTGGATGCTGTAGTGCTCTCTTCACATTTTATAGTGAAAAGTAATTATAGTGTGTAAAACTGTTGGAATAATTCTATATTAGctctatattttaaatagatttaaatgttttaaattatggacctgttatatatatatattaatctacacacccCTTTCTCTACTTCATAGCACATTCTGCATGCTTACACTTTTTCTGTGAATGATTTGtcagtacaatgtaaatataaataaaatacagaaacaaattgtaa

Function

NR:

description
PREDICTED: cytochrome P450 2J2-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664648.1 True 1999 mRNA 0.42 10 64869851 64876715

Neighbor

gene id symbol gene type direction distance location
LOC103036008 LOC103036008,LOC108415307 coding upstream 1438 64859330 ~ 64868413 (+)
LOC103041527 LOC103041527 coding upstream 13026 64848648 ~ 64856825 (+)
LOC111190912 NA coding upstream 35774 64826695 ~ 64834077 (+)
LOC103041822 NA coding upstream 59518 64803224 ~ 64810333 (+)
LOC103042125 NA coding upstream 120142 64742654 ~ 64749709 (+)
LOC103035066 NA coding downstream 4223 64880938 ~ 64890653 (+)
LOC103034427 NA coding downstream 49820 64926535 ~ 64934468 (+)
mmachc mmachc coding downstream 185109 65061824 ~ 65067398 (+)
trnad-guc_4 NA coding downstream 196886 65073601 ~ 65073672 (+)
trnad-guc_5 NA coding downstream 197856 65074571 ~ 65074642 (+)
G30646 NA non-coding upstream 37014 64720955 ~ 64832837 (+)
G30643 NA non-coding upstream 45702 64811379 ~ 64824149 (+)
G30644 NA non-coding upstream 47192 64730064 ~ 64822659 (+)
G30664 NA non-coding upstream 78052 64789121 ~ 64791799 (+)
G30652 NA non-coding upstream 94873 64752233 ~ 64774978 (+)
G30683 NA non-coding downstream 15683 64892398 ~ 64909454 (+)
LOC111190945 NA non-coding downstream 87597 64964312 ~ 64982401 (+)
G30710 ipo13,LOC105910849,LOC107573327 non-coding downstream 107763 64984478 ~ 64987306 (+)
G30718 NA non-coding downstream 174109 65050824 ~ 65159264 (+)
G30722 LOC108415433 non-coding downstream 180804 65057519 ~ 65059450 (+)
kit kit other upstream 600156 64231244 ~ 64269695 (+)
G30362 NA other upstream 1524158 63335734 ~ 63345693 (+)
LOC103035278 NA other upstream 1938718 62926018 ~ 62931133 (+)
LOC103045797 NA other upstream 2016563 62821743 ~ 62853288 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other upstream 2933768 61926080 ~ 61936083 (+)
LOC103033886 LOC108257901,LOC105910874 other downstream 145704 65022419 ~ 65046978 (+)
LOC103031672 NA other downstream 201065 65077780 ~ 65086780 (+)
trnad-guc_9 NA other downstream 221787 65098502 ~ 65098573 (+)
trnad-guc_10 NA other downstream 222576 65099291 ~ 65099362 (+)
G31000 NA other downstream 952066 65828781 ~ 65837365 (+)

Expression


Co-expression Network