LOC103025553


Basic Information

Item Value
gene id LOC103025553
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65869348 ~ 65886738 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664860.1
CAGAGTTTCAGAAAAAAGTCTTGGCCAAATTGGTGGATATCCACTTAGAGGTCAGAAGGGTGGGAAGAAGTGAGCCTACTCTTTCATCTGCCAATATAAAGCAGCTGGAGACAATGGAGGAGTTTGAGAGGGAGGAGGAATGCCTCAAGGACAAGCCAACCTTTGAATCCCTGGTGTTACAACTTGCAAGAATTGGTGGGAAAGATGTAAGAGACTGTGTCCACAAAATTCTTGACAGGCTCTTCACCAACCAGTTGATGGCAAAGTTCAATATGAAGGGGAAAGGGAAGAAGCATAAACTGCCTCTGGAGACAACAAACATATATGAAGCAATAAGAGGTCTCTGCAGACTACCCGGGGTAAATGTCCTGCAGTTGCTTTGATTACGCAACAATTTGCTGCTCTCAGTTCTCTGCCAGACGATATAAAGGCTTCTGATTGTCCTCAGGATGGCTCGGCGGGTAGCTGTGATTGGAGCGGGCAACGCTGGACTGACCTGCATTAAGTGCTGCCTGGACGAGGGGCTGGAGCCTGTTTGCTTTGAGAGCAGTGATGACATTGGAGGACTCTGGAGGTTTAAGGAGACACCAGAGGCTGAGTGTGCCAGCATTTACCGTTCACTGGTTGTGAACACCTCCAAAGAGATGATGTGTTTCAGTGATTTCCCCATGCCAGCTCACTACCCAAACTACATGCCCCACACACTGTTGCTACAGTACTTCAGACTGTACGCAGAACACTTTAACCTGCTCAAGCACATTCAACTCCAGACCAAGGTGCTCAGTGTGAAACAGCGGGATGACTTCTCTTCCTCGGGTCAGTGGGAGGTAGTAACTGAGAGTAGAGATGGTCACAAAGAAACGCAGGTGTTTGATGGTGTGTTAATATGTTCTGGGCACTTCTCACATCCTGTCACACCCCTCTCAGCATTCCCAGGCATTGACACGTTCCCAGGAAAATATATCCACAGTTGGGAATATAAGGACCCTGATCCATTCCGTGGACAACGAGTGGTGGTGGTTGGCATTGGCAACTCTGGAGTAGACATCGCTGTTGAGATCAGCAGAGTAGCAGAGAAAACTTTCCTGAGTACACGCGAAGGAGGATGGGTGGTGGGCCGCATGGCTGGCAGTGGTCTGCCACTAGACATCATGGTGAATAGACGCTTTCTTGCCATGCTGCTCAGGTTGCCTCCTCGATCGTTAGTTAACTGGGCAGCGGAGAGAAGCTACAACAAGAAATATGATCACAGGCTGTACGCACTTCAGCCCAACTACAGGATACTCGACCGACGACCCATCATTAACGATGACCTGCCAGGGCGCATCATCCAGGGAGCGCTACAGATTAAACCAAACATACAGCAGTTCCGTGGCTCCTCTGTTGTGTTTGATAATGGAGTGGTAGAGGAAGGGATTGATGCAGTAGTCTTCTGCACTGGATACAAGGCCACCTTTCCATATCTATCCCCCTCCATCTACAGCGGGCCTGAGGGGGGAATGAGCCTCTATAATAAAGTCTTTCCTCTGAGTCTGGAGCATCCAACACTAGCCATCATTGGGCTACTCAATGCCACAGGCTCTCTAATGCCTGTAGCTGAGATGCAGGCACGATGGGCCACCAGAGTCATCGCAGGACTCAACCACCTTCCTCCTTTGGCAACAATGCAGAAAATGATTGGGAAGGAGATGAAAGCAAAAATAAAGAGATATGGTTCTGTCAAGAAGGCTGCTCTGGAGGTGGATTACATTCCTTACATGGATTCCATCGCACAGGAAGTGGGTGTGCGTCCCAATCTCCTGTATCTGTTCTTGACCGATCCTGGTTTGGGTTGGAGGGTGCTGTATGGTCCTTGCACGCCATTTCAGTATCGGCTACGTGGGCCAGGCCGCTGGACTGGGGCTCGCCAGGCCATCTTTACCCAGTGGGAGCGTGTGGTCCAGCCTCTGAAGACACGGCCCATTCCAGAGCCCAACATCTCTGGCCCATCCTTTTGGAGTCTGACAGGAGGGGCTGCAGTGATTTTTGCCATCATTGTTCTACAAAAGAGTGTTCCAGTTTTCCTTCAGGATCGGGTTGCATCGATAGCCTCTCTCATGACTTACATTGAGTCTGTATTAGGGTGGAGAAATGTGTGATTCAAGTCAGGGCACTCAGATTTGCTCTTGTAGTTTAATTAATGATCCTGTATTGTATAAATGATTTTCCATCACttcctaataaataaaaagtgtgacATACAATTCCCAGTGTGACATACAATTGTATACAAGTCACAAATTCTTACAGtaaaggaaatatgtatttaatcCCTTGCTGGTTGTTTGTCTATTgacaaagacatgaacagtcTATAATTTTAGGGGTTGGTTAATTTAAACAATGAGatagaatatcaaaaataaaatccagaatatcacattgtataaattatatacatttatttgcattttgcagagagaaataagtatttgatccctctggCAAACAAGACTTGGTGGCAAAACTCTTGTTGGCAACACAGGAATCAGACGTTTTTTGTAGTTGATGATGAGGTTTGTGCACATGTCAGGATGAATTTTGGTCCATTCCTCTTATGTGATCAACTTTAAATTATTACGATTTTGAGGCTGTCGCTTAACAATTCGGagcttcagctccctccataagTGTCTGTGGGATTAAGCTCTGGAGACCAGCTAGGTCACTTTATGACCTTAATGTGCTTCTTCTTTTTGAGCCACTCCTTTGTTGccttggctgtatgttttgggtcattgtcatgctggaaggcCCAGCCATGACCCATTTTTAATGTACTGGtagttacacactgcttttagataactttttatcactccttgtgcaaaagttcaaagagttcagtttggtttgatggcttgtgatcatccatcctcctcttgattatattccaggggttttcaatttggtaaaataaaggaAACTCATGTATTAAAAGCA

Function

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0016020 membrane cellular_component
GO:0004497 monooxygenase activity molecular_function
GO:0050662 obsolete coenzyme binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K00485 FMO; dimethylaniline monooxygenase (N-oxide forming)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664860.1 True 2982 mRNA 0.46 12 65869348 65886738

Neighbor

gene id symbol gene type direction distance location
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding upstream 7220 65854934 ~ 65862128 (+)
LOC111191945 NA coding upstream 19586 65849127 ~ 65849762 (+)
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding upstream 378527 65456737 ~ 65490821 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 415040 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 620038 65246531 ~ 65249310 (+)
LOC103024186 LOC108415675 coding downstream 4192 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 21570 65908308 ~ 65931231 (+)
mettl13 mettl13,LOC107712871,LOC107733805 coding downstream 102794 65989532 ~ 66006461 (+)
LOC103035811 dnm3,dnm3a,LOC107712872,LOC107581471 coding downstream 120518 66007256 ~ 66068036 (+)
LOC103021656 rngtt,LOC107554925,LOC107731501,LOC107660510 coding downstream 209977 66096715 ~ 66273717 (+)
G30997 prdx6,LOC106584278 non-coding upstream 22201 65837418 ~ 65847147 (+)
G31009 NA non-coding upstream 34069 65833104 ~ 65835279 (+)
G31004 NA non-coding upstream 134639 65734480 ~ 65734709 (+)
G30995 NA non-coding upstream 153571 65715567 ~ 65715777 (+)
G30986 NA non-coding upstream 186675 65677520 ~ 65682673 (+)
G31090 NA non-coding downstream 125444 66012182 ~ 66018251 (+)
G31091 NA non-coding downstream 178615 66065353 ~ 66066097 (+)
G31119 NA non-coding downstream 193166 66079904 ~ 66080258 (+)
G31123 NA non-coding downstream 388428 66275166 ~ 66275599 (+)
G31149 NA non-coding downstream 456596 66343334 ~ 66394105 (+)
G31000 NA other upstream 31983 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 769986 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 770775 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 782568 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 822370 65022419 ~ 65046978 (+)
G31355 NA other downstream 1327567 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1596597 67483335 ~ 67506898 (+)
G31407 NA other downstream 1610465 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1804703 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 2133302 68020040 ~ 68022940 (+)

Expression


Co-expression Network