G60220


Basic Information

Item Value
gene id G60220
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15555133 ~ 15555411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68537
CGTAACTTTGTTTTAAAAAGTGGGTGGAAGAGGAATGTGTGTGGTGGGGTGATGTACTGTAATTGTGTTCTCACATAATAAACGCACAAAATTTATTGACATAGACCTCATATTTAATATGACAGTTTCATCCTTACCTCTACTATAATACAATATATTGTTAATCTCAAGAGTATTTACATTAGCCAATAAATACTTTGATCCGTGTTTAATGTCAGATTGTCCTGATGAACTAGTGGTAGAATTTTTGTTCAGCGTGCCAGAGGTTCTGGGTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68537 True 279 lncRNA 0.34 1 15555133 15555411

Neighbor

gene id symbol gene type direction distance location
CI01000009_15415868_15427139 NA coding upstream 127935 15413174 ~ 15427198 (+)
CI01000009_14976078_14977321 NA coding upstream 577709 14975771 ~ 14977424 (+)
CI01000009_14925314_14952223 NA coding upstream 602562 14924621 ~ 14952571 (+)
CI01000009_14916323_14920716 NA coding upstream 634338 14916265 ~ 14920795 (+)
CI01000009_14862429_14898325 SLC4A3 coding upstream 656584 14861732 ~ 14898549 (+)
CI01000009_15610515_15613753 NA coding downstream 54621 15610032 ~ 15613753 (+)
CI01000009_15625341_15626360 GPBAR1 coding downstream 69748 15625159 ~ 15626403 (+)
CI01000009_15637754_15643935 NA coding downstream 82239 15637650 ~ 15643935 (+)
CI01000009_15667251_15668333 NA coding downstream 111840 15667251 ~ 15669450 (+)
CI01000009_15680573_15681601 NA coding downstream 125162 15680573 ~ 15681976 (+)
G60219 NA non-coding upstream 437 15554354 ~ 15554696 (+)
G60218 NA non-coding upstream 1298 15553627 ~ 15553835 (+)
G60209 NA non-coding upstream 13126 15540612 ~ 15542007 (+)
G60200 NA non-coding upstream 25545 15528024 ~ 15529588 (+)
G60187 NA non-coding upstream 45992 15507840 ~ 15509141 (+)
G60221 NA non-coding downstream 195 15555606 ~ 15555833 (+)
G60222 NA non-coding downstream 1108 15556519 ~ 15556901 (+)
G60213 NA non-coding downstream 107062 15662473 ~ 15662695 (+)
G60280 NA non-coding downstream 122071 15677482 ~ 15694591 (+)
G60286 NA non-coding downstream 142368 15697779 ~ 15698147 (+)
G60028 NA other upstream 178964 15352047 ~ 15376169 (+)
CI01000009_14857765_14859526 NA other upstream 696489 14857713 ~ 14859636 (+)
G58711 NA other upstream 781360 14766659 ~ 14773773 (+)
G58649 NA other upstream 903111 14649724 ~ 14652022 (+)
CI01000009_15708273_15712002 METTL5 other downstream 152581 15706460 ~ 15712005 (+)
CI01000009_15770057_15782295 FASTKD1 other downstream 202768 15770057 ~ 15783049 (+)

Expression


Co-expression Network