LOC103035214


Basic Information

Item Value
gene id LOC103035214
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73931397 ~ 73939674 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022666462.1
TTCAGTGCTGTCTGAAGGATTTTTTCTCCTTCGTCTGCCAGACCATTACAAATGTTACACTAATGGTCTAATTGGACCGGATAAGGGTGAGTCTGAGGGAATTACACCACAGTCTTGCCTTATAAAAGCCCCAATAGCAAGTGTCATCTACTACAGAGAAAGGCAGTGAAGGAGAGAACAGGACACTGCAGAGATGAACAgcgcttctctttttctcctgttaGCATGTGTGTTATTCACATTTTCTTCTGCCCAGAAAAGCTGCAGAGGCCAATGTGGAGAAGCTTATAACCGAGGTGATAAGTGTCACTGTGACTTTGAGTGTCTTTCACACAACGAGTGCTGCAAAAACTACGAGTCTGTTTGTACCACACGTGATTCGTGTAAAGGGCGATGCGGGGAGCGTTTTAAGAGAGGACGACAGTGCCACTGTGACattgaatgttttaaatttaaccAGTGCTGTCCTGACTATGAGACACAGTGCACACTTGAGGACACTGCTTTAAAGCCACAGCAGAGCACAGCAGACTCACCGCAAAGGACCTCTAGCTTACGCGTTAATTCACAGTGTAACAAACTTGCAGAAGAAGAAACCGATTATCCTGAGGTGACTACCGACAGCAATACACAAACCAGTCCTGCTGAAgAAGACTATGGCCCGGAGGAAGAAGGTAACAATGATCCTCCTGTACCTGAGAAAGACCCTGAAAGTTCTCAAGATACATCTGAATCTGAGCCACTTCCTTCCAACTCCCCAACTTCTACTCCATCTCCTGAGGTAACCACCATGCCAAACAGCGACCATTCAGACCTGCCACCAACCCCCACAAATACAGCACAGGCAGCTCAGCTGGCTACCACTACTGCGCTGCCTGACCAGAACACCCAGACAAACTCACCTGAGCTTAAACCATCTAACCCCGACCAACCTGAAGGAACGGTGGCTCCAGAGGACAACCCCGACCAACCTGAAGGAACAGTGGCTCCAGAGGACAACCCTGGACCACAGACAGAACAGCCAGCACAGCCAGAGCCCACTACAAGTGCAGCCTCTGCAGGAGTGGAGCCCAAGGACCTGGACCCAACAGAGATTCCCATCACTACAGAAACACCAAAGACTAAAGAAAGTACACGGGGTCCCCCAACAACACACGATTTGTCCATTACTCCTGATTCTGTGAAACAAGATCCTTCTCCCtcaaaagaagcagaaaagcCCACTAAACCTAAACCAGAGGCTAAAGATGTTCTTGATGAGGGCAACCCTCAGGATTACCAGTCAGATGCCAACAAAGACACAAACCTCTGCAGTGAACTTCCCGTCAATGGCTTGACCACGCTGAGAAATGGCACCATCGCGGTTTTCCGAGGTCACTACTTTTGGATGTTGGATTCCAGAAGGAGACCTGGTCCTGCTCAGAGTATCACAGACGTGTGGGGAATTCCCTCTCCTATTGATACGGTTTTCACACGCTGTAACTGCCAGGGAAAGACCTACTTTTTCAAGGGAAATAACTACTGGAGATTTGAGAATGATGTCATGGACCCTGGTTTTCCTAGACCAGTCAGTGAGGGCTTTGGATTGGGGGGTCAGATCACTGCAGCTTTGTCCATGCCTCAGTACCGGAGCAGGAAGGAGTCCGTGTTCTTCTTCAAAAGAGGTGGATTGGCTCAAAGATACAGCTATCGTGTCACACCGCAGTGCGGCCGCAATCTAGCTGTGTATACGACAAAGAAGAAAGTGAAGAGGCAAGCAGTTCCTGAACTGGGTCAAGAAATCGACATTAGGAAGAGCTTGAGAGGCTTTCCTTACACCGTGTCCTCTGCTATATCAGTTCGTTCTCCAGGAGGAGATGGATACAAATACTATGTCTTCTCAAAAAGCAAGTACTACAGTTTAAAGATGGAGGGAGACACACCAGTGATCCTAACCCCAAGGAGTGGACCAGGACAGCAAAAACCTGAAAAGAGCTGGTTCAGATGCCAAAAAACTCTCTAGGGTCTAGGCCATACTTCAATTAACCcttcaaaataataaattacagatAACACACAAATAGTAACACA
>XM_022666464.1
TTCAGCTGTGAGCTGTTCTTCAAATCTGTGAGCATTTGGCATATTTGCGTAAACCTTTACCCAGTCCACTTTATTTGGACAGGACACTGCAGAGATGAACAgcgcttctctttttctcctgttaGCATGTGTGTTATTCACATTTTCTTCTGCCCAGAAAAGCTGCAGAGGCCAATGTGGAGAAGCTTATAACCGAGGTGATAAGTGTCACTGTGACTTTGAGTGTCTTTCACACAACGAGTGCTGCAAAAACTACGAGTCTGTTTGTACCACACGTGATTCGTGTAAAGGGCGATGCGGGGAGCGTTTTAAGAGAGGACGACAGTGCCACTGTGACattgaatgttttaaatttaaccAGTGCTGTCCTGACTATGAGACACAGTGCACACTTGAGGAAGAAGAAACCGATTATCCTGAGGTGACTACCGACAGCAATACACAAACCAGTCCTGCTGAAgAAGACTATGGCCCGGAGGAAGAAGGTAACAATGATCCTCCTGTACCTGAGAAAGACCCTGAAAGTTCTCAAGATACATCTGAATCTGAGCCACTTCCTTCCAACTCCCCAACTTCTACTCCATCTCCTGAGGTAACCACCATGCCAAACAGCGACCATTCAGACCTGCCACCAACCCCCACAAATACAGCACAGGCAGCTCAGCTGGCTACCACTACTGCGCTGCCTGACCAGAACACCCAGACAAACTCACCTGAGCTTAAACCATCTAACCCCGACCAACCTGAAGGAACGGTGGCTCCAGAGGACAACCCCGACCAACCTGAAGGAACAGTGGCTCCAGAGGACAACCCTGGACCACAGACAGAACAGCCAGCACAGCCAGAGCCCACTACAAGTGCAGCCTCTGCAGGAGTGGAGCCCAAGGACCTGGACCCAACAGAGATTCCCATCACTACAGAAACACCAAAGACTAAAGAAAGTACACGGGGTCCCCCAACAACACACGATTTGTCCATTACTCCTGATTCTGTGAAACAAGATCCTTCTCCCtcaaaagaagcagaaaagcCCACTAAACCTAAACCAGAGGCTAAAGATGTTCTTGATGAGGGCAACCCTCAGGATTACCAGTCAGATGCCAACAAAGACACAAACCTCTGCAGTGAACTTCCCGTCAATGGCTTGACCACGCTGAGAAATGGCACCATCGCGGTTTTCCGAGGTCACTACTTTTGGATGTTGGATTCCAGAAGGAGACCTGGTCCTGCTCAGAGTATCACAGACGTGTGGGGAATTCCCTCTCCTATTGATACGGTTTTCACACGCTGTAACTGCCAGGGAAAGACCTACTTTTTCAAGGGAAATAACTACTGGAGATTTGAGAATGATGTCATGGACCCTGGTTTTCCTAGACCAGTCAGTGAGGGCTTTGGATTGGGGGGTCAGATCACTGCAGCTTTGTCCATGCCTCAGTACCGGAGCAGGAAGGAGTCCGTGTTCTTCTTCAAAAGAGGTGGATTGGCTCAAAGATACAGCTATCGTGTCACACCGCAGTGCGGCCGCAATCTAGCTGTGTATACGACAAAGAAGAAAGTGAAGAGGCAAGCAGTTCCTGAACTGGGTCAAGAAATCGACATTAGGAAGAGCTTGAGAGGCTTTCCTTACACCGTGTCCTCTGCTATATCAGTTCGTTCTCCAGGAGGAGATGGATACAAATACTATGTCTTCTCAAAAAGCAAGTACTACAGTTTAAAGATGGAGGGAGACACACCAGTGATCCTAACCCCAAGGAGTGGACCAGGACAGCAAAAACCTGAAAAGAGCTGGTTCAGATGCCAAAAAACTCTCTAGGGTCTAGGCCATACTTCAATTAACCcttcaaaataataaattacagatAACACACAAATAGTAACACA

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K24286 PRG4; proteoglycan 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022666462.1 True 2070 mRNA 0.48 14 73931397 73939674
XM_022666464.1 False 1881 mRNA 0.48 12 73931397 73939479

Neighbor

gene id symbol gene type direction distance location
LOC103034242 pla2g4a,LOC108442417,LOC108257972,LOC106560559 coding downstream 118256 73784007 ~ 73813141 (-)
ppil6 ppil6 coding downstream 175881 73749986 ~ 73755516 (-)
enah enah coding downstream 183487 73647169 ~ 73747910 (-)
LOC103032852 lbr coding downstream 291973 73630251 ~ 73639424 (-)
LOC103031805 LOC103031805,LOC105892805 coding downstream 322189 73604327 ~ 73609208 (-)
c3h1orf112 cunh1orf112 coding upstream 16137 73955811 ~ 73970935 (-)
LOC103037051 si:dkey-51e6.1,LOC103037051,LOC108442414,LOC107555634,LOC107726439,LOC107696171,LOC105907105,LOC108257519 coding upstream 37517 73977191 ~ 73979734 (-)
LOC103031184 LOC108443214 coding upstream 85931 74025605 ~ 74043117 (-)
LOC103038456 LOC103038456,LOC108443222,LOC107393220,LOC107098566,LOC106916811,LOC103142585 coding upstream 108265 74047939 ~ 74086439 (-)
G33076 LOC108442415,LOC108257608,LOC106560557,LOC107726497,LOC107696164 non-coding downstream 46483 73882893 ~ 73884914 (-)
G32937 NA non-coding downstream 395293 73533661 ~ 73536104 (-)
LOC111191385 NA non-coding downstream 603243 73326367 ~ 73328154 (-)
G32900 NA non-coding downstream 606030 73319644 ~ 73325367 (-)
G32891 NA non-coding downstream 667844 73262330 ~ 73263553 (-)
G33091 NA non-coding upstream 11238 73950912 ~ 73953542 (-)
G33099 NA non-coding upstream 52068 73991742 ~ 73992572 (-)
LOC111191425 NA other downstream 62859 73796463 ~ 73868538 (-)
ak9 ak9 other downstream 152531 73756908 ~ 73778866 (-)
G32946 NA other downstream 378514 73552415 ~ 73552883 (-)
G32914 NA other downstream 542785 73387862 ~ 73388612 (-)
LOC103029909 LOC108412949 other downstream 897611 72921906 ~ 73033786 (-)

Expression


Co-expression Network