G60442


Basic Information

Item Value
gene id G60442
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15589657 ~ 15649377 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68795
ATATATATATATATATATAATTTATATTGTGGCCACAAATTAGATTTCATCGTCTTGTTTTTGTAAGTTGTGGCAACGATTTACTAATTTGTTCCCTCAATTTAGTTAAATCATGGCTATAAATTAAGAATTCGTCCCCACGACTTATTTGTTCCCTCTTTTTACTAAATCGTGGCCATGTTGTACTAATTTGTTCCTTCGTTTTGATTTAACTAAAACAAGAGTACGAATTATTACAATGTAGCCAGACTATTTAGTAAAACGAAGGAACAAATGATTATATTTTGCGAACGATTTACTTAAAACGTGGGAACGAATTAGTAAAATGTGCTAACGTATTATTTGGTCGTGAGAACAAATTCTCAATTCGTTGCCACAATATACACAATTTTTTTTCCTGCATGTCACATTAGGGGCTCTATAGTTCATAAAGTTGAAAGCAAACAAAAAAAATCAACTGAACAGTTAGTACTTGTTTGATACCTTTTTTTCCAGCCGGTAGAAGTGTTTTAATTTTGAATTTTACACATTCAACCCTCAACCCTCAACCCTCATTTTGACACATTTGCATTTAATCGGAAAATCGTTTGTTTTATTTTAGTCCCCACAAATTCAGAAACTAGATGTTTTCCTCAATCAGACTGTTAATATTTACACAGTAAAAACAACCTCCTTAGTCAAAGAATTCACAATGGCTGGAATGTTAAGTGCTTCCCTTTGTCATCAGACTTTAAAGATTTCTTGGAAACACTTTTAAATACAGTTTATTTTGTTGACAGTTAATGTATTAAGTATTTTGAACTAACAATGAGCATTTATCACAGCATTTATTAATTAGGTTAATATTTATTTCTTCATAATGTTTATTATTAATTCAATGAACTAATGTTAACGAATTGAATCTTATTGCAAAATCTAGTGACATACTTGTGACATGTACCTGCAAAGTTGCTTATAGTCAGTAGAATGTCTGTTGGGGAGCATCAAAATAAAGTGTTAGCAGATATTAAGTTGACAGTTTAATAATACTATAATGAGAGTTATTTCACATGTAGTTGCAAAGTTTCTTGTAGTTAGTAGAATGTCTGTTGGGGAGCATCAAAATAGCAGATAGTTTAATAATACTATAATGAGAGTTAGTTGATATGTAGTTGCGAAGTTACTTGTAGTTAGTAGAATCTGTTGAGGGAGCATCAAAATAAAGTGTTAGCAGATATTAAGTTGACAGTTTAATAATACTATAATGAGAGTTAGTTGACATGTAGTTTCAAAGTTTCTTGTAATTAGTATAATGTCTGTTGGAGGAGCATCAAAATAAATTGTTAGCAGATATAATGTTGACAGTTTAATAATACTATAATGAGAGTTATTTGACATGTTGCAAAGTTACTTGTAGTTAGTAGAATGTCTTTTGGGGAGCATCAAAATAGCAGATAGTTTAATAATACTATAATGAGAGTTAGTTGATATGTAGTTGCAAAGTTACTTGTAGTTAGTAGAATCTGTTGGGGGAGCAACAAAATAAAGTGTTAGCAGATATTAAGTTGACAGTTTAATAATACTATAATGAGAGTTAGTTGACATGTAGTTGCCCAGTTACTTGTAGTTAGAATGTCTGTTGGGGAGGATCAAAATAGCAGATAGTTTAATAATACTATAATGAGAGTTAGTTGACATGTAGCTGCAAAGTTACTTATAGTTAGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68795 True 1707 lncRNA 0.31 2 15589657 15649377

Neighbor

gene id symbol gene type direction distance location
CI01000009_15504401_15585060 NA coding downstream 3828 15503406 ~ 15585829 (-)
CI01000009_15483720_15484321 NA coding downstream 105336 15483709 ~ 15484321 (-)
CI01000009_15318811_15390382 TNS1 coding downstream 199275 15318811 ~ 15390382 (-)
CI01000009_15301177_15304489 NA coding downstream 285157 15301097 ~ 15304500 (-)
CI01000009_15229965_15235247 NA coding downstream 354129 15229657 ~ 15235528 (-)
CI01000009_15654061_15662554 ARPC2 coding upstream 4383 15653760 ~ 15663026 (-)
CI01000009_15693066_15694538 UGT5B4, UGT5B6 coding upstream 43617 15692994 ~ 15694629 (-)
CI01000009_15716557_15721525 KLHL23 coding upstream 67100 15716477 ~ 15721596 (-)
CI01000009_15726357_15736168 PHGDH coding upstream 76768 15726145 ~ 15736168 (-)
CI01000009_15784118_15789896 KLHL41, KLHL41A coding upstream 134703 15784080 ~ 15789896 (-)
G60439 NA non-coding downstream 39778 15549582 ~ 15549879 (-)
G60437 NA non-coding downstream 41197 15548161 ~ 15548460 (-)
G60370 NA non-coding downstream 269372 15311531 ~ 15320285 (-)
G60430 NA non-coding downstream 296972 15292447 ~ 15292685 (-)
G60468 NA non-coding upstream 58627 15708004 ~ 15712147 (-)
G60469 NA non-coding upstream 69185 15718562 ~ 15719161 (-)
G60376 NA non-coding upstream 96091 15745468 ~ 15746486 (-)
G60472 NA non-coding upstream 101321 15750698 ~ 15750994 (-)
G59941 NA other downstream 457154 15132104 ~ 15132503 (-)
G59811 NA other downstream 702193 14862397 ~ 14887464 (-)
G59490 NA other downstream 1551784 14033564 ~ 14037873 (-)
CI01000009_13975122_13976026 NA other downstream 1611043 13975099 ~ 13978614 (-)

Expression


Co-expression Network