Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111191895 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 39965925 ~ 39970723 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_022668002.1 | True | 837 | mRNA | 0.42 | 5 | 39965925 | 39970723 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111196312 | LOC103039380 | coding | downstream | 4447 | 39960453 ~ 39961478 (-) |
| LOC103043887 | NA | coding | downstream | 9050 | 39955522 ~ 39956875 (-) |
| LOC111196326 | LOC103039380 | coding | downstream | 22738 | 39942162 ~ 39943187 (-) |
| LOC111191888 | NA | coding | downstream | 44481 | 39920108 ~ 39921444 (-) |
| LOC103043276 | NA | coding | downstream | 51239 | 39913661 ~ 39914686 (-) |
| LOC103039380 | LOC103039380,LOC108432811,LOC108261192 | coding | upstream | 5017 | 39975740 ~ 39977696 (-) |
| themis | themis | coding | upstream | 23861 | 39994584 ~ 40017094 (-) |
| ptprk | ptprk,LOC106607755,LOC106571353 | coding | upstream | 49769 | 40020492 ~ 40112623 (-) |
| LOC111191900 | eif4g3 | coding | upstream | 337208 | 40307931 ~ 40309488 (-) |
| arfgef1 | arfgef1,LOC107595140,LOC107686689 | coding | upstream | 349206 | 40319929 ~ 40358619 (-) |
| G24997 | NA | non-coding | downstream | 117716 | 39845373 ~ 39848209 (-) |
| G24992 | NA | non-coding | downstream | 139944 | 39819276 ~ 39825981 (-) |
| G24964 | NA | non-coding | downstream | 233446 | 39724455 ~ 39732479 (-) |
| LOC111196215 | NA | non-coding | downstream | 441651 | 39514469 ~ 39524274 (-) |
| G24911 | NA | non-coding | downstream | 466459 | 39499043 ~ 39499466 (-) |
| G25128 | NA | non-coding | upstream | 412878 | 40383601 ~ 40421173 (-) |
| G25174 | NA | non-coding | upstream | 755076 | 40725799 ~ 40726362 (-) |
| G25173 | NA | non-coding | upstream | 755762 | 40726485 ~ 40728663 (-) |
| G25258 | NA | non-coding | upstream | 1183544 | 41154267 ~ 41154801 (-) |
| G25255 | NA | non-coding | upstream | 1251396 | 41222119 ~ 41223487 (-) |
| G24903 | NA | other | downstream | 507736 | 39455236 ~ 39458189 (-) |
| LOC103043888 | LOC108432835 | other | downstream | 619009 | 39273635 ~ 39346916 (-) |
| batf | batf,LOC107697118 | other | downstream | 641223 | 39309726 ~ 39324702 (-) |
| smim8 | smim8 | other | downstream | 1038932 | 38925623 ~ 38926993 (-) |
| LOC103024598 | LOC108411439 | other | downstream | 1043008 | 38887626 ~ 38922917 (-) |
| LOC111196341 | NA | other | upstream | 204539 | 40175262 ~ 40230868 (-) |
| G25265 | slco5a1 | other | upstream | 1243698 | 41214421 ~ 41218829 (-) |
| arhgap11a | NA | other | upstream | 1465318 | 41436041 ~ 41442494 (-) |
| LOC111196508 | NA | other | upstream | 1885372 | 41856095 ~ 41865844 (-) |
| LOC111196586 | LOC108262118 | other | upstream | 1898301 | 41869024 ~ 41880424 (-) |
